Gene Gene information from NCBI Gene database.
Entrez ID 84910
Gene name Transmembrane protein 87B
Gene symbol TMEM87B
Synonyms (NCBI Gene)
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Chromosome 2
Chromosome location 2q13
Summary This gene encodes a protein that may interact with human papillomavirus type 18 E6 oncogene. The protein is also likely to be involved in endosome-to-trans-Golgi network retrograde transport. The gene is expressed in adult and fetal tissues, including bra
SNPs SNP information provided by dbSNP.
1
SNP ID Visualize variation Clinical significance Consequence
rs369634007 A>G Likely-pathogenic Downstream transcript variant, genic downstream transcript variant, coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
658
miRTarBase ID miRNA Experiments Reference
MIRT017733 hsa-miR-335-5p Microarray 18185580
MIRT621782 hsa-miR-606 HITS-CLIP 23824327
MIRT621781 hsa-miR-5003-3p HITS-CLIP 23824327
MIRT621780 hsa-miR-4476 HITS-CLIP 23824327
MIRT621779 hsa-miR-6876-5p HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
8
GO ID Ontology Definition Evidence Reference
GO:0000139 Component Golgi membrane IEA
GO:0005794 Component Golgi apparatus IBA
GO:0005794 Component Golgi apparatus IEA
GO:0005829 Component Cytosol IEA
GO:0016020 Component Membrane IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
617203 25913 ENSG00000153214
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q96K49
Protein name Transmembrane protein 87B
Protein function May be involved in retrograde transport from endosomes to the trans-Golgi network (TGN).
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF06814 Lung_7-TM_R 173 458 Lung seven transmembrane receptor Family
Sequence
MVAACRSVAGLLPRRRRCFPARAPLLRVALCLLCWTPAAVRAVPELGLWLETVNDKSGPL
IFRKTMFNSTDIKLSVKSFHCSGPVKFTIVWHLKYHTCHNEHSNLEELFQKHKLSVDEDF
CHYLKNDNCWTTKNENLDCNSDSQVFPSLNNKELINIRNVSNQERSMDVVARTQKDGFHI
FIVSIKTENTDASWNLNVSLSMIGPHGYISASDWPLMIFYMVMCIVYILYGILWLTWSAC
YWKDILRIQFWIAAVIFLGMLEKAVFYSEYQNISNTGLSTQGLLIFAELISAIKRTLARL
LVIIVSLGYGIVKPRLGTVMHRVIGLGLLYLIFAAVEGVMRVIGGSNHLAVVLDDIILAV
IDSIFVWFIFISLAQTMKTLRLRKNTVKFSLYRHFKNTLIFAVLASIVFMGWTTKTFRIA
KCQSDWMERWVDDAFWSFLFSLILIVIMFLWRPSANNQ
RYAFMPLIDDSDDEIEEFMVTS
ENLTEGIKLRASKSVSNGTAKPATSENFDEDLKWVEENIPSSFTDVALPVLVDSDEEIMT
RSEMAEKMFSSEKIM
Sequence length 555
Interactions View interactions