ZC3H10 (zinc finger CCCH-type containing 10)

Gene
Gene miRNA Gene ontology Other IDs Protein
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
84872
Gene name Gene Name - the full gene name approved by the HGNC.
Zinc finger CCCH-type containing 10
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ZC3H10
Synonyms (NCBI Gene) Gene synonyms aliases
ZC3HDC10
Chromosome Chromosome number
12
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
12q13.2
miRNA miRNA information provided by mirtarbase database.
Gene miRNA Gene ontology Other IDs Protein
Show/Hide all(29)
miRTarBase ID miRNA Experiments Reference
MIRT463503 hsa-miR-562 PAR-CLIP 23592263
MIRT463502 hsa-miR-374c-3p PAR-CLIP 23592263
MIRT463500 hsa-miR-3125 PAR-CLIP 23592263
MIRT463501 hsa-miR-3916 PAR-CLIP 23592263
MIRT463499 hsa-miR-6859-5p PAR-CLIP 23592263
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
Gene miRNA Gene ontology Other IDs Protein
Show/Hide all(12)
GO ID Ontology Definition Evidence Reference
GO:0003723 Function RNA binding HDA 22658674
GO:0003723 Function RNA binding IBA
GO:0003723 Function RNA binding IEA
GO:0005515 Function Protein binding IPI 16189514, 16713569, 19060904, 23275563, 25416956, 32296183, 32814053
GO:0005634 Component Nucleus IDA 28431233
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
Gene miRNA Gene ontology Other IDs Protein
MIM HGNC e!Ensembl
HGNC N/A HGNC
Protein
Gene miRNA Gene ontology Other IDs Protein
UniProt ID Q96K80
Protein name Zinc finger CCCH domain-containing protein 10
Protein function Specific regulator of miRNA biogenesis. Binds, via the C3H1-type zinc finger domains, to the binding motif 5'-GCAGCGC-3' on microRNA pri-MIR143 and negatively regulates the processing to mature microRNA.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00642 zf-CCCH 38 → 62 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Family
PF14608 zf-CCCH_2 79 → 97 Domain
PF00642 zf-CCCH 135 → 160 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Family
Sequence 
MPDRDSYANGTGSSGGGPGGGGSEEASGAGVGSGGASSDAICRDFLRNVCKRGKRCRYRH
PDMSEVSNLGVSKNEFIFCHDFQNKECSRPNCRFIHGSKEDEDGYKKTGELPPRLRQKVA
AGLGLSPADLPNGKEEVPICRDFLKGDCQRGAKCKFRHLQRDFEFDARGGGGTGGGSTGS
VLPGRRHDLYDIYDLPDRGFEDHEPGPKRRRGGCCPPDGPHFESYEYSLAPPRGVECRLL
EEENAMLRKRVEELKKQVSNLLATNEVLLEQNAQFRNQAKVITLSSTAPATEQTLAPTVG
TVATFNHGIAQTHTTLSSQALQPRPVSQQELVAPAGAPAAPPTNAAPPAAPPPPPPHLTP
EITPLSAALAQTIAQGMAPPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTY
PIASQSMRITAMPH
Sequence length 434
Interactions View interactions
<