Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
84727
Gene name Gene Name - the full gene name approved by the HGNC.
SplA/ryanodine receptor domain and SOCS box containing 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
SPSB2
Synonyms (NCBI Gene) Gene synonyms aliases
GRCC9, SSB2
Chromosome Chromosome number
12
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
12p13.31
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of a subfamily of proteins containing a central SPRY (repeats in splA and RyR) domain and a C-terminal suppressor of cytokine signaling (SOCS) box. This protein plays a role in cell signaling. This gene is present in a gene-rich
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT1386580 hsa-miR-1207-3p CLIP-seq
MIRT1386581 hsa-miR-1226 CLIP-seq
MIRT1386582 hsa-miR-214 CLIP-seq
MIRT1386583 hsa-miR-3619-5p CLIP-seq
MIRT1386584 hsa-miR-3663-5p CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 15601820, 19159283, 20561531, 21199876, 23455924, 25814554, 32296183, 32814053
GO:0005829 Component Cytosol IDA 21199876
GO:0005829 Component Cytosol TAS
GO:0006511 Process Ubiquitin-dependent protein catabolic process IDA 21199876
GO:0016032 Process Viral process IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
611658 29522 ENSG00000111671
Protein
UniProt ID Q99619
Protein name SPRY domain-containing SOCS box protein 2 (SSB-2) (Gene-rich cluster protein C9)
Protein function Substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (PubMed:15601820, PubMed:21199
PDB 3EMW , 5XN3 , 6DN5 , 6DN6 , 6JKJ , 6JWM , 6JWN , 6KEY
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00622 SPRY 88 218 SPRY domain Family
PF07525 SOCS_box 224 262 SOCS box Domain
Sequence
Sequence length 263
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Neddylation
Antigen processing: Ubiquitination & Proteasome degradation
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Colonic neoplasms Malignant tumor of colon rs267607789, rs774277300, rs781222233, rs1060502734, rs1060503333, rs1339238483 26965516
Colorectal cancer Colorectal Carcinoma, Adenocarcinoma of large intestine rs137854568, rs137854573, rs137854575, rs387906234, rs121908380, rs121908702, rs267606674, rs794729661, rs121909055, rs281865417, rs267606884, rs28934575, rs587776769, rs104893815, rs587776800
View all (467 more)
26965516
Colorectal neoplasms Colorectal Neoplasms, Malignant neoplasm of large intestine rs28929483, rs63751108, rs28929484, rs63749831, rs63750047, rs63751207, rs63749811, rs1553350126, rs63750875, rs63750955, rs587776706, rs63750871, rs587776715, rs63751466, rs63750049
View all (1682 more)
26965516
Unknown
Disease term Disease name Evidence References Source
Hyperopia Hyperopia GWAS
Colorectal Cancer Colorectal Cancer In summary, our data strongly demonstrated that upregulation of GRB7 conferred MEKi resistance in CRC cells with KRAS mutations by mediating RTK signaling through the recruitment of PLK1. GWAS, CBGDA
Associations from Text Mining
Disease Name Relationship Type References
Airway Obstruction Associate 34782693
Borderline Personality Disorder Associate 25612291
Carcinogenesis Associate 40149497
Carcinoma Hepatocellular Associate 40149497
Carcinoma Non Small Cell Lung Associate 40149497
Colorectal Neoplasms Associate 26965516
Hepatitis C Stimulate 31344133
Inflammation Associate 40149497
Neoplasm Metastasis Associate 40149497
Pediatric Obesity Associate 25612291