Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene SNPs miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	84705
Gene name Gene Name - the full gene name approved by the HGNC.	GTP binding protein 3, mitochondrial
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	GTPBP3
Synonyms (NCBI Gene) Gene synonyms aliases	COXPD23, GTPBG3, MSS1, MTGP1, THDF1
Disease Acronyms (UniProt) Disease acronyms from UniProt database	COXPD23
Chromosome Chromosome number	19
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	19p13.11
Summary Summary of gene provided in NCBI Entrez Gene.	This locus encodes a GTP-binding protein. The encoded protein is localized to the mitochondria and may play a role in mitochondrial tRNA modification. Polymorphisms at this locus may be associated with severity of aminoglycoside-induced deafness, a diseas

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SNP ID	Visualize variation	Clinical significance	Consequence
rs372174278	G>C,T	Pathogenic	Missense variant, coding sequence variant
rs558425417	T>A,C	Likely-pathogenic	Missense variant, coding sequence variant
rs730880255	A>T	Pathogenic	Coding sequence variant, missense variant
rs748022451	G>C,T	Likely-pathogenic	Intron variant
rs765129583	G>A	Likely-pathogenic	Missense variant, coding sequence variant
rs770871640	T>C	Likely-pathogenic	Missense variant, coding sequence variant
rs774708853	C>T	Likely-pathogenic	Missense variant, coding sequence variant
rs869320746	->C	Pathogenic	Frameshift variant, coding sequence variant
rs886037734	G>A	Pathogenic	Missense variant, coding sequence variant
rs886037735	G>C	Pathogenic	Missense variant, intron variant, coding sequence variant
rs886037736	AA>GTG	Pathogenic	Frameshift variant, intron variant, coding sequence variant
rs886041488	T>-	Pathogenic	Frameshift variant, coding sequence variant
rs1019249439	T>A,C,G	Pathogenic	Intron variant, missense variant, initiator codon variant
rs1274363168	C>T	Likely-pathogenic	Coding sequence variant, missense variant
rs1555726849	G>T	Pathogenic	Coding sequence variant, stop gained
rs1599560256	G>T	Pathogenic	Coding sequence variant, stop gained

Show/Hide all(329)

miRTarBase ID	miRNA	Experiments	Reference
MIRT001627	hsa-let-7b-5p	pSILAC	18668040
MIRT001627	hsa-let-7b-5p	Proteomics;Other	18668040
MIRT567388	hsa-miR-181a-5p	PAR-CLIP	20371350
MIRT567387	hsa-miR-181b-5p	PAR-CLIP	20371350
MIRT567386	hsa-miR-181c-5p	PAR-CLIP	20371350
MIRT567385	hsa-miR-181d-5p	PAR-CLIP	20371350
MIRT567384	hsa-miR-4262	PAR-CLIP	20371350
MIRT567383	hsa-miR-383-5p	PAR-CLIP	20371350
MIRT567382	hsa-miR-5694	PAR-CLIP	20371350
MIRT081397	hsa-miR-3622a-3p	PAR-CLIP	20371350
MIRT081398	hsa-miR-3622b-3p	PAR-CLIP	20371350
MIRT567381	hsa-miR-6765-3p	PAR-CLIP	20371350
MIRT081399	hsa-miR-4682	PAR-CLIP	20371350
MIRT567380	hsa-miR-518d-5p	PAR-CLIP	20371350
MIRT567379	hsa-miR-518e-5p	PAR-CLIP	20371350
MIRT567378	hsa-miR-518f-5p	PAR-CLIP	20371350
MIRT567377	hsa-miR-519a-5p	PAR-CLIP	20371350
MIRT567376	hsa-miR-519b-5p	PAR-CLIP	20371350
MIRT567375	hsa-miR-519c-5p	PAR-CLIP	20371350
MIRT567374	hsa-miR-520c-5p	PAR-CLIP	20371350
MIRT567373	hsa-miR-522-5p	PAR-CLIP	20371350
MIRT567372	hsa-miR-523-5p	PAR-CLIP	20371350
MIRT567371	hsa-miR-526a	PAR-CLIP	20371350
MIRT567370	hsa-miR-4777-5p	PAR-CLIP	20371350
MIRT567369	hsa-miR-2681-5p	PAR-CLIP	20371350
MIRT567388	hsa-miR-181a-5p	PAR-CLIP	20371350
MIRT567387	hsa-miR-181b-5p	PAR-CLIP	20371350
MIRT567386	hsa-miR-181c-5p	PAR-CLIP	20371350
MIRT567385	hsa-miR-181d-5p	PAR-CLIP	20371350
MIRT567384	hsa-miR-4262	PAR-CLIP	20371350
MIRT567383	hsa-miR-383-5p	PAR-CLIP	20371350
MIRT567382	hsa-miR-5694	PAR-CLIP	20371350
MIRT081397	hsa-miR-3622a-3p	PAR-CLIP	20371350
MIRT081398	hsa-miR-3622b-3p	PAR-CLIP	20371350
MIRT567381	hsa-miR-6765-3p	PAR-CLIP	20371350
MIRT081399	hsa-miR-4682	PAR-CLIP	20371350
MIRT567380	hsa-miR-518d-5p	PAR-CLIP	20371350
MIRT567379	hsa-miR-518e-5p	PAR-CLIP	20371350
MIRT567378	hsa-miR-518f-5p	PAR-CLIP	20371350
MIRT567377	hsa-miR-519a-5p	PAR-CLIP	20371350
MIRT567376	hsa-miR-519b-5p	PAR-CLIP	20371350
MIRT567375	hsa-miR-519c-5p	PAR-CLIP	20371350
MIRT567374	hsa-miR-520c-5p	PAR-CLIP	20371350
MIRT567373	hsa-miR-522-5p	PAR-CLIP	20371350
MIRT567372	hsa-miR-523-5p	PAR-CLIP	20371350
MIRT567371	hsa-miR-526a	PAR-CLIP	20371350
MIRT567370	hsa-miR-4777-5p	PAR-CLIP	20371350
MIRT567369	hsa-miR-2681-5p	PAR-CLIP	20371350
MIRT1038067	hsa-miR-1262	CLIP-seq
MIRT1038068	hsa-miR-1827	CLIP-seq
MIRT1038069	hsa-miR-2114	CLIP-seq
MIRT1038070	hsa-miR-2682	CLIP-seq
MIRT1038071	hsa-miR-3122	CLIP-seq
MIRT1038072	hsa-miR-335	CLIP-seq
MIRT1038073	hsa-miR-34b	CLIP-seq
MIRT1038074	hsa-miR-3689a-3p	CLIP-seq
MIRT1038075	hsa-miR-3689c	CLIP-seq
MIRT1038076	hsa-miR-3913-5p	CLIP-seq
MIRT1038077	hsa-miR-3929	CLIP-seq
MIRT1038078	hsa-miR-4419b	CLIP-seq
MIRT1038079	hsa-miR-4478	CLIP-seq
MIRT1038080	hsa-miR-449c	CLIP-seq
MIRT1038081	hsa-miR-4539	CLIP-seq
MIRT1038082	hsa-miR-4649-3p	CLIP-seq
MIRT1038083	hsa-miR-4679	CLIP-seq
MIRT1038084	hsa-miR-4680-5p	CLIP-seq
MIRT1038085	hsa-miR-4701-3p	CLIP-seq
MIRT1038086	hsa-miR-4722-5p	CLIP-seq
MIRT1038087	hsa-miR-4724-5p	CLIP-seq
MIRT1038088	hsa-miR-4728-5p	CLIP-seq
MIRT1038089	hsa-miR-4768-3p	CLIP-seq
MIRT1038090	hsa-miR-485-5p	CLIP-seq
MIRT1038091	hsa-miR-508-5p	CLIP-seq
MIRT1038092	hsa-miR-542-3p	CLIP-seq
MIRT1038093	hsa-miR-544b	CLIP-seq
MIRT1038094	hsa-miR-661	CLIP-seq
MIRT1038095	hsa-miR-766	CLIP-seq
MIRT1038096	hsa-miR-888	CLIP-seq
MIRT1038097	hsa-miR-940	CLIP-seq
MIRT1038098	hsa-miR-1205	CLIP-seq
MIRT1038099	hsa-miR-1207-3p	CLIP-seq
MIRT1038067	hsa-miR-1262	CLIP-seq
MIRT1038100	hsa-miR-1299	CLIP-seq
MIRT1038101	hsa-miR-136	CLIP-seq
MIRT1038102	hsa-miR-181a	CLIP-seq
MIRT1038103	hsa-miR-181b	CLIP-seq
MIRT1038104	hsa-miR-181c	CLIP-seq
MIRT1038105	hsa-miR-181d	CLIP-seq
MIRT1038068	hsa-miR-1827	CLIP-seq
MIRT1038106	hsa-miR-1909	CLIP-seq
MIRT1038069	hsa-miR-2114	CLIP-seq
MIRT1038107	hsa-miR-2861	CLIP-seq
MIRT1038108	hsa-miR-3120-5p	CLIP-seq
MIRT1038109	hsa-miR-3153	CLIP-seq
MIRT1038110	hsa-miR-3157-5p	CLIP-seq
MIRT1038111	hsa-miR-3179	CLIP-seq
MIRT1038112	hsa-miR-3189-5p	CLIP-seq
MIRT1038113	hsa-miR-3202	CLIP-seq
MIRT1038072	hsa-miR-335	CLIP-seq
MIRT1038114	hsa-miR-338-3p	CLIP-seq
MIRT1038073	hsa-miR-34b	CLIP-seq
MIRT1038115	hsa-miR-3613-3p	CLIP-seq
MIRT1038116	hsa-miR-3614-5p	CLIP-seq
MIRT1038117	hsa-miR-3649	CLIP-seq
MIRT1038118	hsa-miR-3664-5p	CLIP-seq
MIRT1038119	hsa-miR-3689d	CLIP-seq
MIRT1038120	hsa-miR-371-5p	CLIP-seq
MIRT1038121	hsa-miR-371b-5p	CLIP-seq
MIRT1038122	hsa-miR-3918	CLIP-seq
MIRT1038077	hsa-miR-3929	CLIP-seq
MIRT1038123	hsa-miR-3973	CLIP-seq
MIRT1038124	hsa-miR-3978	CLIP-seq
MIRT1038125	hsa-miR-4271	CLIP-seq
MIRT1038126	hsa-miR-4293	CLIP-seq
MIRT1038127	hsa-miR-4323	CLIP-seq
MIRT1038078	hsa-miR-4419b	CLIP-seq
MIRT1038079	hsa-miR-4478	CLIP-seq
MIRT1038128	hsa-miR-4512	CLIP-seq
MIRT1038129	hsa-miR-4522	CLIP-seq
MIRT1038081	hsa-miR-4539	CLIP-seq
MIRT1038082	hsa-miR-4649-3p	CLIP-seq
MIRT1038084	hsa-miR-4680-5p	CLIP-seq
MIRT1038130	hsa-miR-4684-5p	CLIP-seq
MIRT1038131	hsa-miR-4685-5p	CLIP-seq
MIRT1038132	hsa-miR-4690-3p	CLIP-seq
MIRT1038133	hsa-miR-4695-3p	CLIP-seq
MIRT1038085	hsa-miR-4701-3p	CLIP-seq
MIRT1038086	hsa-miR-4722-5p	CLIP-seq
MIRT1038087	hsa-miR-4724-5p	CLIP-seq
MIRT1038134	hsa-miR-4725-3p	CLIP-seq
MIRT1038135	hsa-miR-4733-5p	CLIP-seq
MIRT1038136	hsa-miR-4747-5p	CLIP-seq
MIRT1038137	hsa-miR-4758-3p	CLIP-seq
MIRT1038089	hsa-miR-4768-3p	CLIP-seq
MIRT1038138	hsa-miR-4782-5p	CLIP-seq
MIRT1038090	hsa-miR-485-5p	CLIP-seq
MIRT1038091	hsa-miR-508-5p	CLIP-seq
MIRT1038139	hsa-miR-516b	CLIP-seq
MIRT1038140	hsa-miR-520g	CLIP-seq
MIRT1038141	hsa-miR-520h	CLIP-seq
MIRT1038092	hsa-miR-542-3p	CLIP-seq
MIRT1038142	hsa-miR-543	CLIP-seq
MIRT1038143	hsa-miR-548c-3p	CLIP-seq
MIRT1038144	hsa-miR-593	CLIP-seq
MIRT1038145	hsa-miR-596	CLIP-seq
MIRT1038094	hsa-miR-661	CLIP-seq
MIRT1038095	hsa-miR-766	CLIP-seq
MIRT1038146	hsa-miR-875-3p	CLIP-seq
MIRT1038096	hsa-miR-888	CLIP-seq
MIRT1038097	hsa-miR-940	CLIP-seq
MIRT1038067	hsa-miR-1262	CLIP-seq
MIRT2007750	hsa-miR-1285	CLIP-seq
MIRT1038068	hsa-miR-1827	CLIP-seq
MIRT1038069	hsa-miR-2114	CLIP-seq
MIRT1038071	hsa-miR-3122	CLIP-seq
MIRT2007751	hsa-miR-3187-5p	CLIP-seq
MIRT2007752	hsa-miR-323-5p	CLIP-seq
MIRT1038072	hsa-miR-335	CLIP-seq
MIRT1038073	hsa-miR-34b	CLIP-seq
MIRT1038116	hsa-miR-3614-5p	CLIP-seq
MIRT2007753	hsa-miR-3650	CLIP-seq
MIRT1038074	hsa-miR-3689a-3p	CLIP-seq
MIRT1038075	hsa-miR-3689c	CLIP-seq
MIRT1038119	hsa-miR-3689d	CLIP-seq
MIRT1038076	hsa-miR-3913-5p	CLIP-seq
MIRT1038077	hsa-miR-3929	CLIP-seq
MIRT1038078	hsa-miR-4419b	CLIP-seq
MIRT1038079	hsa-miR-4478	CLIP-seq
MIRT1038081	hsa-miR-4539	CLIP-seq
MIRT1038082	hsa-miR-4649-3p	CLIP-seq
MIRT1038084	hsa-miR-4680-5p	CLIP-seq
MIRT1038085	hsa-miR-4701-3p	CLIP-seq
MIRT1038086	hsa-miR-4722-5p	CLIP-seq
MIRT1038087	hsa-miR-4724-5p	CLIP-seq
MIRT1038088	hsa-miR-4728-5p	CLIP-seq
MIRT1038089	hsa-miR-4768-3p	CLIP-seq
MIRT2007754	hsa-miR-4793-3p	CLIP-seq
MIRT1038090	hsa-miR-485-5p	CLIP-seq
MIRT1038091	hsa-miR-508-5p	CLIP-seq
MIRT2007755	hsa-miR-612	CLIP-seq
MIRT1038094	hsa-miR-661	CLIP-seq
MIRT1038095	hsa-miR-766	CLIP-seq
MIRT2007756	hsa-miR-876-3p	CLIP-seq
MIRT1038096	hsa-miR-888	CLIP-seq
MIRT2007757	hsa-miR-933	CLIP-seq
MIRT1038097	hsa-miR-940	CLIP-seq
MIRT2240450	hsa-miR-1225-3p	CLIP-seq
MIRT2240451	hsa-miR-1233	CLIP-seq
MIRT1038067	hsa-miR-1262	CLIP-seq
MIRT2240452	hsa-miR-1273f	CLIP-seq
MIRT2240453	hsa-miR-140-3p	CLIP-seq
MIRT1038068	hsa-miR-1827	CLIP-seq
MIRT1038069	hsa-miR-2114	CLIP-seq
MIRT1038070	hsa-miR-2682	CLIP-seq
MIRT1038071	hsa-miR-3122	CLIP-seq
MIRT2240454	hsa-miR-3154	CLIP-seq
MIRT1038112	hsa-miR-3189-5p	CLIP-seq
MIRT2007752	hsa-miR-323-5p	CLIP-seq
MIRT1038072	hsa-miR-335	CLIP-seq
MIRT1038114	hsa-miR-338-3p	CLIP-seq
MIRT1038073	hsa-miR-34b	CLIP-seq
MIRT1038116	hsa-miR-3614-5p	CLIP-seq
MIRT2240455	hsa-miR-3647-3p	CLIP-seq
MIRT2007753	hsa-miR-3650	CLIP-seq
MIRT1038074	hsa-miR-3689a-3p	CLIP-seq
MIRT1038075	hsa-miR-3689c	CLIP-seq
MIRT1038119	hsa-miR-3689d	CLIP-seq
MIRT1038076	hsa-miR-3913-5p	CLIP-seq
MIRT1038077	hsa-miR-3929	CLIP-seq
MIRT2240456	hsa-miR-4282	CLIP-seq
MIRT1038078	hsa-miR-4419b	CLIP-seq
MIRT2240457	hsa-miR-4434	CLIP-seq
MIRT1038079	hsa-miR-4478	CLIP-seq
MIRT1038080	hsa-miR-449c	CLIP-seq
MIRT2240458	hsa-miR-4516	CLIP-seq
MIRT2240459	hsa-miR-4521	CLIP-seq
MIRT2240460	hsa-miR-4534	CLIP-seq
MIRT1038081	hsa-miR-4539	CLIP-seq
MIRT1038082	hsa-miR-4649-3p	CLIP-seq
MIRT1038083	hsa-miR-4679	CLIP-seq
MIRT1038084	hsa-miR-4680-5p	CLIP-seq
MIRT1038085	hsa-miR-4701-3p	CLIP-seq
MIRT1038086	hsa-miR-4722-5p	CLIP-seq
MIRT1038087	hsa-miR-4724-5p	CLIP-seq
MIRT1038088	hsa-miR-4728-5p	CLIP-seq
MIRT1038135	hsa-miR-4733-5p	CLIP-seq
MIRT1038137	hsa-miR-4758-3p	CLIP-seq
MIRT1038089	hsa-miR-4768-3p	CLIP-seq
MIRT2240461	hsa-miR-4802-5p	CLIP-seq
MIRT1038090	hsa-miR-485-5p	CLIP-seq
MIRT2240462	hsa-miR-488	CLIP-seq
MIRT2240463	hsa-miR-505	CLIP-seq
MIRT1038091	hsa-miR-508-5p	CLIP-seq
MIRT2240464	hsa-miR-513a-3p	CLIP-seq
MIRT2240465	hsa-miR-518e	CLIP-seq
MIRT1038092	hsa-miR-542-3p	CLIP-seq
MIRT1038093	hsa-miR-544b	CLIP-seq
MIRT2240466	hsa-miR-549	CLIP-seq
MIRT1038094	hsa-miR-661	CLIP-seq
MIRT1038095	hsa-miR-766	CLIP-seq
MIRT2007756	hsa-miR-876-3p	CLIP-seq
MIRT1038096	hsa-miR-888	CLIP-seq
MIRT2007757	hsa-miR-933	CLIP-seq
MIRT1038097	hsa-miR-940	CLIP-seq
MIRT1038108	hsa-miR-3120-5p	CLIP-seq
MIRT1038071	hsa-miR-3122	CLIP-seq
MIRT1038115	hsa-miR-3613-3p	CLIP-seq
MIRT1038118	hsa-miR-3664-5p	CLIP-seq
MIRT1038074	hsa-miR-3689a-3p	CLIP-seq
MIRT1038075	hsa-miR-3689c	CLIP-seq
MIRT1038120	hsa-miR-371-5p	CLIP-seq
MIRT1038121	hsa-miR-371b-5p	CLIP-seq
MIRT1038076	hsa-miR-3913-5p	CLIP-seq
MIRT1038126	hsa-miR-4293	CLIP-seq
MIRT1038129	hsa-miR-4522	CLIP-seq
MIRT1038083	hsa-miR-4679	CLIP-seq
MIRT1038130	hsa-miR-4684-5p	CLIP-seq
MIRT1038088	hsa-miR-4728-5p	CLIP-seq
MIRT1038143	hsa-miR-548c-3p	CLIP-seq
MIRT1038144	hsa-miR-593	CLIP-seq
MIRT1038145	hsa-miR-596	CLIP-seq
MIRT2007750	hsa-miR-1285	CLIP-seq
MIRT1038068	hsa-miR-1827	CLIP-seq
MIRT1038108	hsa-miR-3120-5p	CLIP-seq
MIRT1038071	hsa-miR-3122	CLIP-seq
MIRT2007751	hsa-miR-3187-5p	CLIP-seq
MIRT1038112	hsa-miR-3189-5p	CLIP-seq
MIRT1038114	hsa-miR-338-3p	CLIP-seq
MIRT1038073	hsa-miR-34b	CLIP-seq
MIRT1038115	hsa-miR-3613-3p	CLIP-seq
MIRT1038116	hsa-miR-3614-5p	CLIP-seq
MIRT1038118	hsa-miR-3664-5p	CLIP-seq
MIRT1038074	hsa-miR-3689a-3p	CLIP-seq
MIRT1038075	hsa-miR-3689c	CLIP-seq
MIRT1038119	hsa-miR-3689d	CLIP-seq
MIRT1038120	hsa-miR-371-5p	CLIP-seq
MIRT1038121	hsa-miR-371b-5p	CLIP-seq
MIRT1038076	hsa-miR-3913-5p	CLIP-seq
MIRT1038126	hsa-miR-4293	CLIP-seq
MIRT1038129	hsa-miR-4522	CLIP-seq
MIRT1038083	hsa-miR-4679	CLIP-seq
MIRT1038130	hsa-miR-4684-5p	CLIP-seq
MIRT1038086	hsa-miR-4722-5p	CLIP-seq
MIRT1038088	hsa-miR-4728-5p	CLIP-seq
MIRT1038137	hsa-miR-4758-3p	CLIP-seq
MIRT1038089	hsa-miR-4768-3p	CLIP-seq
MIRT2007754	hsa-miR-4793-3p	CLIP-seq
MIRT1038091	hsa-miR-508-5p	CLIP-seq
MIRT1038143	hsa-miR-548c-3p	CLIP-seq
MIRT1038144	hsa-miR-593	CLIP-seq
MIRT1038145	hsa-miR-596	CLIP-seq
MIRT2007755	hsa-miR-612	CLIP-seq
MIRT1038094	hsa-miR-661	CLIP-seq
MIRT1038095	hsa-miR-766	CLIP-seq
MIRT1038097	hsa-miR-940	CLIP-seq
MIRT2007750	hsa-miR-1285	CLIP-seq
MIRT1038068	hsa-miR-1827	CLIP-seq
MIRT1038108	hsa-miR-3120-5p	CLIP-seq
MIRT1038071	hsa-miR-3122	CLIP-seq
MIRT2007751	hsa-miR-3187-5p	CLIP-seq
MIRT1038112	hsa-miR-3189-5p	CLIP-seq
MIRT1038114	hsa-miR-338-3p	CLIP-seq
MIRT1038073	hsa-miR-34b	CLIP-seq
MIRT1038115	hsa-miR-3613-3p	CLIP-seq
MIRT1038116	hsa-miR-3614-5p	CLIP-seq
MIRT1038118	hsa-miR-3664-5p	CLIP-seq
MIRT1038074	hsa-miR-3689a-3p	CLIP-seq
MIRT1038075	hsa-miR-3689c	CLIP-seq
MIRT1038119	hsa-miR-3689d	CLIP-seq
MIRT1038120	hsa-miR-371-5p	CLIP-seq
MIRT1038121	hsa-miR-371b-5p	CLIP-seq
MIRT1038076	hsa-miR-3913-5p	CLIP-seq
MIRT1038126	hsa-miR-4293	CLIP-seq
MIRT1038129	hsa-miR-4522	CLIP-seq
MIRT1038083	hsa-miR-4679	CLIP-seq
MIRT1038130	hsa-miR-4684-5p	CLIP-seq
MIRT1038086	hsa-miR-4722-5p	CLIP-seq
MIRT1038088	hsa-miR-4728-5p	CLIP-seq
MIRT1038137	hsa-miR-4758-3p	CLIP-seq
MIRT1038089	hsa-miR-4768-3p	CLIP-seq
MIRT2007754	hsa-miR-4793-3p	CLIP-seq
MIRT1038091	hsa-miR-508-5p	CLIP-seq
MIRT1038143	hsa-miR-548c-3p	CLIP-seq
MIRT1038144	hsa-miR-593	CLIP-seq
MIRT1038145	hsa-miR-596	CLIP-seq
MIRT2007755	hsa-miR-612	CLIP-seq
MIRT1038094	hsa-miR-661	CLIP-seq
MIRT1038095	hsa-miR-766	CLIP-seq
MIRT1038097	hsa-miR-940	CLIP-seq

Show/Hide all(8)

GO ID	Ontology	Definition	Evidence	Reference
GO:0002098	Process	TRNA wobble uridine modification	IBA	21873635
GO:0003924	Function	GTPase activity	IEA
GO:0005515	Function	Protein binding	IPI	25416956, 32296183, 32814053
GO:0005525	Function	GTP binding	IEA
GO:0005737	Component	Cytoplasm	IBA	21873635
GO:0005739	Component	Mitochondrion	IBA	21873635
GO:0005739	Component	Mitochondrion	IDA
GO:0030488	Process	TRNA methylation	IBA	21873635

MIM	HGNC	e!Ensembl
608536	14880	ENSG00000130299

Protein

UniProt ID

Q969Y2

Protein name

5-taurinomethyluridine-[tRNA] synthase subunit GTPB3, mitochondrial (EC 3.6.1.-) (GTP-binding protein 3) (Mitochondrial GTP-binding protein 1) (tRNA modification GTPase GTPBP3, mitochondrial)

Protein function

GTPase component of the GTPBP3-MTO1 complex that catalyzes the 5-taurinomethyluridine (taum(5)U) modification at the 34th wobble position (U34) of mitochondrial tRNAs (mt-tRNAs), which plays a role in mt-tRNA decoding and mitochondrial translati

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF10396	TrmE_N	35 → 152	GTP-binding protein TrmE N-terminus	Family
PF12631	MnmE_helical	155 → 489	MnmE helical domain	Family
PF01926	MMR_HSR1	251 → 375	50S ribosome-binding GTPase	Family

Tissue specificity

TISSUE SPECIFICITY: Ubiquitously expressed. {ECO:0000269|PubMed:12370316}.

Sequence

MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH
ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA
VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL
DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQADIEVRALQVALGAHLRDA
RRGQRLRSGVHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVL
LSDTAGLREGVGPVEQEGVRRARERLEQADLILAMLDASDLASPSSCNFLATVVASVGAQ
SPSDSSQRLLLVLNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCG
DPSTDPPLLTRARHQHHLQGCLDALGHYKQSKDLALAAEALRVARGHLTRLTGGGGTEEI
LDIIFQDFCVGK

Sequence length

492

Interactions

View interactions

Show/Hide Causal Diseases (3)

Disease term	Disease name	dbSNP ID	References
Causal
Cardiomyopathy	Cardiomyopathies	rs267607003, rs267607002, rs267607004, rs63750743, rs121908333, rs121908334, rs104894655, rs121434420, rs121434421, rs193922674, rs111517471, rs121908987, rs193922384, rs121909374, rs121909377 View all (900 more)
Combined oxidative phosphorylation deficiency	COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 23, Combined oxidative phosphorylation defect type 23	rs587776508, rs576462794, rs118203917, rs387906327, rs139430866, rs387906962, rs138119149, rs387907061, rs1562800908, rs397515421, rs397514598, rs397514610, rs397514611, rs397514612, rs201431517 View all (155 more)	25434004, 26741492
Developmental delay	Global developmental delay	rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291 View all (32 more)

Show/Hide Unknown Diseases (3)

Disease term	Disease name	Evidence	Source
Unknown
Congestive heart failure	Congestive heart failure		ClinVar
Leigh Syndrome	Leigh syndrome		GenCC
Breast Cancer	Breast Cancer	Importantly, breast cancer patients bearing PRC2 LOF mutations displayed significantly worse prognosis compared with PRC2 wild-type patients	GWAS, CBGDA

Show/Hide Text Mining Associations (18)

Disease Name	Relationship Type	References
Associations from Text Mining
Acidosis Lactic	Associate	25434004, 26642043, 29348686
Brain Diseases	Associate	25434004
Cardiomyopathy Hypertrophic	Associate	25434004, 26642043, 29348686, 39719609
Deafness	Associate	12370316
Developmental Disabilities	Associate	39719609
Eye Neoplasms	Associate	39719609
Heart Diseases	Associate	39719609
Immunologic Deficiency Syndromes	Inhibit	39719609
Leigh Disease	Associate	25434004
Mitochondrial Diseases	Associate	25434004, 28740091, 39719609
Muscle Hypotonia	Associate	39719609
Neoplasms	Associate	35320117
Neurologic Manifestations	Associate	25434004
Respiratory Insufficiency	Associate	12370316
Seizures	Associate	39719609
Squamous Cell Carcinoma of Head and Neck	Associate	35985767
Strabismus	Associate	39719609
Triple Negative Breast Neoplasms	Associate	24325915

GTPBP3 (GTP binding protein 3, mitochondrial)