Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	84660
Gene name Gene Name - the full gene name approved by the HGNC.	Coiled-coil domain containing 62
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	CCDC62
Synonyms (NCBI Gene) Gene synonyms aliases	CT109, ERAP75, SPGF67, TSP-NY
Chromosome Chromosome number	12
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	12q24.31

Show/Hide all(50)

miRTarBase ID	miRNA	Experiments	Reference
MIRT724653	hsa-miR-4714-5p	HITS-CLIP	19536157
MIRT724652	hsa-miR-345-5p	HITS-CLIP	19536157
MIRT724651	hsa-miR-4522	HITS-CLIP	19536157
MIRT724650	hsa-miR-3161	HITS-CLIP	19536157
MIRT724653	hsa-miR-4714-5p	HITS-CLIP	19536157
MIRT724652	hsa-miR-345-5p	HITS-CLIP	19536157
MIRT724651	hsa-miR-4522	HITS-CLIP	19536157
MIRT724650	hsa-miR-3161	HITS-CLIP	19536157
MIRT869369	hsa-miR-3120-3p	CLIP-seq
MIRT869370	hsa-miR-3160-3p	CLIP-seq
MIRT869371	hsa-miR-345	CLIP-seq
MIRT869372	hsa-miR-3941	CLIP-seq
MIRT869373	hsa-miR-4487	CLIP-seq
MIRT869374	hsa-miR-466	CLIP-seq
MIRT869375	hsa-miR-4672	CLIP-seq
MIRT869376	hsa-miR-4699-3p	CLIP-seq
MIRT869377	hsa-miR-4796-5p	CLIP-seq
MIRT869378	hsa-miR-545	CLIP-seq
MIRT869379	hsa-miR-548c-3p	CLIP-seq
MIRT869380	hsa-miR-558	CLIP-seq
MIRT869381	hsa-miR-654-3p	CLIP-seq
MIRT1957941	hsa-miR-181a	CLIP-seq
MIRT1957942	hsa-miR-181b	CLIP-seq
MIRT1957943	hsa-miR-181c	CLIP-seq
MIRT1957944	hsa-miR-181d	CLIP-seq
MIRT1957945	hsa-miR-23a	CLIP-seq
MIRT1957946	hsa-miR-23b	CLIP-seq
MIRT1957947	hsa-miR-23c	CLIP-seq
MIRT869370	hsa-miR-3160-3p	CLIP-seq
MIRT869371	hsa-miR-345	CLIP-seq
MIRT1957948	hsa-miR-4262	CLIP-seq
MIRT869373	hsa-miR-4487	CLIP-seq
MIRT1957949	hsa-miR-4684-5p	CLIP-seq
MIRT1957950	hsa-miR-4768-5p	CLIP-seq
MIRT1957951	hsa-miR-489	CLIP-seq
MIRT1957952	hsa-miR-514	CLIP-seq
MIRT1957953	hsa-miR-514b-3p	CLIP-seq
MIRT869380	hsa-miR-558	CLIP-seq
MIRT869370	hsa-miR-3160-3p	CLIP-seq
MIRT869371	hsa-miR-345	CLIP-seq
MIRT2194922	hsa-miR-3616-5p	CLIP-seq
MIRT2194923	hsa-miR-3647-5p	CLIP-seq
MIRT869373	hsa-miR-4487	CLIP-seq
MIRT2194924	hsa-miR-4795-5p	CLIP-seq
MIRT869379	hsa-miR-548c-3p	CLIP-seq
MIRT869380	hsa-miR-558	CLIP-seq
MIRT2194925	hsa-miR-573	CLIP-seq
MIRT2194926	hsa-miR-592	CLIP-seq
MIRT2498292	hsa-miR-4328	CLIP-seq
MIRT2498292	hsa-miR-4328	CLIP-seq

Show/Hide all(17)

GO ID	Ontology	Definition	Evidence	Reference
GO:0001669	Component	Acrosomal vesicle	IDA	28339613
GO:0001669	Component	Acrosomal vesicle	IEA
GO:0001835	Process	Blastocyst hatching	IEA
GO:0003713	Function	Transcription coactivator activity	IPI	18563714, 19126643
GO:0005515	Function	Protein binding	IPI	19126643
GO:0005634	Component	Nucleus	IDA	19126643
GO:0005634	Component	Nucleus	IEA
GO:0005737	Component	Cytoplasm	IEA
GO:0005815	Component	Microtubule organizing center	IBA
GO:0007286	Process	Spermatid development	IEA
GO:0007286	Process	Spermatid development	IMP	31985809
GO:0030331	Function	Nuclear estrogen receptor binding	IPI	18563714, 19126643
GO:0030520	Process	Estrogen receptor signaling pathway	IDA	18563714, 19126643
GO:0031410	Component	Cytoplasmic vesicle	IEA
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	IDA	19126643
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	IPI	18563714
GO:0071392	Process	Cellular response to estradiol stimulus	IDA	18563714, 19126643

MIM	HGNC	e!Ensembl
613481	30723	ENSG00000130783

Protein

UniProt ID

Q6P9F0

Protein name

Coiled-coil domain-containing protein 62 (Protein TSP-NY) (Protein aaa)

Protein function

Nuclear receptor coactivator that can enhance preferentially estrogen receptors ESR1 and ESR2 transactivation. Also modulates progesterone/PGR, glucocorticoid/NR3C1 and androgen/AR receptors transactivation, although at lower level; little effec

Family and domains

Tissue specificity

TISSUE SPECIFICITY: Highly expressed in adult testis. Expressed in both prostate epithelial and stromal cells, with predominant expression in epithelial cells (at protein level) (PubMed:19126643). Not detected in prostate by RT-PCR (PubMed:19165854). Over

Sequence

MNPPAAFLAGRQNIGSEVEISTIEKQRKELQLLIGELKDRDKELNDMVAVHQQQLLSWEE
DRQKVLTLEERCSKLEGELHKRTEIIRSLTKKVKALESNQMECQTALQKTQLQLQEMAQK
ATHSSLLSEDLEARNETLSNTLVELSAQVGQLQAREQALTTMIKLKDKDIIEAVNHIADC
SGKFKMLEHALRDAKMAETCIVKEKQDYKQKLKALKIEVNKLKEDLNEKTTENNEQREEI
IRLKQEKSCLHDELLFTVEREKRKDELLNIAKSKQERTNSELHNLRQIYVKQQSDLQFLN
FNVENSQELIQMYDSKMEESKALDSSRDMCLSDLENNHPKVDIKREKNQKSLFKDQKFEA
MLVQQNRSDKSSCDECKEKKQQIDTVFGEKSVITLSSIFTKDLVEKHNLPWSLGGKTQIE
PENKITLCKIHTKSPKCHGTGVQNEGKQPSETPTLSDEKQWHDVSVYLGLTNCPSSKHPE
KLDVECQDQMERSEISCCQKNEACLGESGMCDSKCCHPSNFIIEAPGHMSDVEWMSIFKP
SKMQRIVRLKSGCTCSESICGTQHDSPASELIAIQDSHSLGSSKSALREDETESSSNKKN
SPTSLLIYKDAPAFNEKASIVLPSQDDFSPTSKLQRLLAESRQMVTDLELSTLLPISHEN
LTGSATNKSEVPEESAQKNTFVSY

Sequence length

684

Interactions

View interactions

Show/Hide Unknown Diseases (4)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Atrial Fibrillation	Atrial fibrillation	N/A	N/A	GWAS
Insomnia	Insomnia	N/A	N/A	GWAS
Parkinson Disease	Parkinson's disease	N/A	N/A	GWAS
Schizophrenia	Schizophrenia	N/A	N/A	GWAS

Show/Hide Text Mining Associations (7)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Autonomic Nervous System Diseases	Associate	34994165
Hypokinesia	Associate	24514572
Inflammation	Associate	36926335
Parkinson Disease	Associate	21812969, 24514572, 34994165, 36926335
Parkinson Disease	Stimulate	24312176
Parkinson Disease Secondary	Associate	24514572
Teratozoospermia	Associate	31985809

CCDC62 (coiled-coil domain containing 62)