Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Pathways
Entrez ID	84527
Gene name	Zinc finger protein 559
Gene symbol	ZNF559
Synonyms (NCBI Gene)	NBLA00121
Chromosome	19
Chromosome location	19p13.2

118

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miRTarBase ID	miRNA	Experiments	Reference
MIRT000922	hsa-miR-15a-5p	Microarray	18362358
MIRT000921	hsa-miR-16-5p	Microarray	18362358
MIRT295213	hsa-miR-5692a	PAR-CLIP	22100165
MIRT295213	hsa-miR-5692a	PAR-CLIP	22100165
MIRT295213	hsa-miR-5692a	PAR-CLIP	22100165
MIRT295213	hsa-miR-5692a	PAR-CLIP	22100165
MIRT1529540	hsa-miR-1260	CLIP-seq
MIRT1529541	hsa-miR-1260b	CLIP-seq
MIRT1529542	hsa-miR-140-3p	CLIP-seq
MIRT1529543	hsa-miR-181a	CLIP-seq
MIRT1529544	hsa-miR-181b	CLIP-seq
MIRT1529545	hsa-miR-181c	CLIP-seq
MIRT1529546	hsa-miR-181d	CLIP-seq
MIRT1529547	hsa-miR-188-3p	CLIP-seq
MIRT1529548	hsa-miR-1911	CLIP-seq
MIRT1529549	hsa-miR-3124-3p	CLIP-seq
MIRT1529550	hsa-miR-3156-3p	CLIP-seq
MIRT1529551	hsa-miR-3156-5p	CLIP-seq
MIRT1529552	hsa-miR-3200-5p	CLIP-seq
MIRT1529553	hsa-miR-3691-3p	CLIP-seq
MIRT1529554	hsa-miR-4251	CLIP-seq
MIRT1529555	hsa-miR-4262	CLIP-seq
MIRT1529556	hsa-miR-4329	CLIP-seq
MIRT1529557	hsa-miR-4446-5p	CLIP-seq
MIRT1529558	hsa-miR-4476	CLIP-seq
MIRT1529559	hsa-miR-4666-5p	CLIP-seq
MIRT1529560	hsa-miR-4690-3p	CLIP-seq
MIRT1529561	hsa-miR-595	CLIP-seq
MIRT1529562	hsa-miR-654-3p	CLIP-seq
MIRT1529563	hsa-miR-942	CLIP-seq
MIRT1529564	hsa-miR-3667-3p	CLIP-seq
MIRT1529565	hsa-miR-3692	CLIP-seq
MIRT1529540	hsa-miR-1260	CLIP-seq
MIRT1529541	hsa-miR-1260b	CLIP-seq
MIRT1529547	hsa-miR-188-3p	CLIP-seq
MIRT1529550	hsa-miR-3156-3p	CLIP-seq
MIRT1529540	hsa-miR-1260	CLIP-seq
MIRT1529541	hsa-miR-1260b	CLIP-seq
MIRT1529543	hsa-miR-181a	CLIP-seq
MIRT1529544	hsa-miR-181b	CLIP-seq
MIRT1529545	hsa-miR-181c	CLIP-seq
MIRT1529546	hsa-miR-181d	CLIP-seq
MIRT1529547	hsa-miR-188-3p	CLIP-seq
MIRT1529549	hsa-miR-3124-3p	CLIP-seq
MIRT1529550	hsa-miR-3156-3p	CLIP-seq
MIRT2379441	hsa-miR-3202	CLIP-seq
MIRT2379442	hsa-miR-3688-3p	CLIP-seq
MIRT1529553	hsa-miR-3691-3p	CLIP-seq
MIRT1529555	hsa-miR-4262	CLIP-seq
MIRT2379443	hsa-miR-4533	CLIP-seq
MIRT2379444	hsa-miR-4643	CLIP-seq
MIRT1529560	hsa-miR-4690-3p	CLIP-seq
MIRT2379445	hsa-miR-4753-5p	CLIP-seq
MIRT2379446	hsa-miR-642b	CLIP-seq
MIRT1529562	hsa-miR-654-3p	CLIP-seq
MIRT2464358	hsa-miR-4753-3p	CLIP-seq
MIRT2671467	hsa-miR-1236	CLIP-seq
MIRT1529540	hsa-miR-1260	CLIP-seq
MIRT1529541	hsa-miR-1260b	CLIP-seq
MIRT1529543	hsa-miR-181a	CLIP-seq
MIRT1529544	hsa-miR-181b	CLIP-seq
MIRT1529545	hsa-miR-181c	CLIP-seq
MIRT1529546	hsa-miR-181d	CLIP-seq
MIRT1529547	hsa-miR-188-3p	CLIP-seq
MIRT2671468	hsa-miR-2053	CLIP-seq
MIRT2671469	hsa-miR-219-2-3p	CLIP-seq
MIRT1529550	hsa-miR-3156-3p	CLIP-seq
MIRT1529551	hsa-miR-3156-5p	CLIP-seq
MIRT1529552	hsa-miR-3200-5p	CLIP-seq
MIRT2379441	hsa-miR-3202	CLIP-seq
MIRT2671470	hsa-miR-3673	CLIP-seq
MIRT2671471	hsa-miR-3685	CLIP-seq
MIRT2379442	hsa-miR-3688-3p	CLIP-seq
MIRT2671472	hsa-miR-384	CLIP-seq
MIRT1529554	hsa-miR-4251	CLIP-seq
MIRT1529555	hsa-miR-4262	CLIP-seq
MIRT1529556	hsa-miR-4329	CLIP-seq
MIRT2671473	hsa-miR-4426	CLIP-seq
MIRT1529557	hsa-miR-4446-5p	CLIP-seq
MIRT2379443	hsa-miR-4533	CLIP-seq
MIRT2379444	hsa-miR-4643	CLIP-seq
MIRT2671474	hsa-miR-4647	CLIP-seq
MIRT2671475	hsa-miR-4662b	CLIP-seq
MIRT2464358	hsa-miR-4753-3p	CLIP-seq
MIRT2379445	hsa-miR-4753-5p	CLIP-seq
MIRT2671476	hsa-miR-4797-3p	CLIP-seq
MIRT2379446	hsa-miR-642b	CLIP-seq
MIRT1529562	hsa-miR-654-3p	CLIP-seq
MIRT1529563	hsa-miR-942	CLIP-seq
MIRT2671467	hsa-miR-1236	CLIP-seq
MIRT1529540	hsa-miR-1260	CLIP-seq
MIRT1529541	hsa-miR-1260b	CLIP-seq
MIRT1529543	hsa-miR-181a	CLIP-seq
MIRT1529544	hsa-miR-181b	CLIP-seq
MIRT1529545	hsa-miR-181c	CLIP-seq
MIRT1529546	hsa-miR-181d	CLIP-seq
MIRT1529547	hsa-miR-188-3p	CLIP-seq
MIRT2671468	hsa-miR-2053	CLIP-seq
MIRT2671469	hsa-miR-219-2-3p	CLIP-seq
MIRT1529550	hsa-miR-3156-3p	CLIP-seq
MIRT2379441	hsa-miR-3202	CLIP-seq
MIRT2671470	hsa-miR-3673	CLIP-seq
MIRT2671471	hsa-miR-3685	CLIP-seq
MIRT2379442	hsa-miR-3688-3p	CLIP-seq
MIRT2671472	hsa-miR-384	CLIP-seq
MIRT1529555	hsa-miR-4262	CLIP-seq
MIRT2671473	hsa-miR-4426	CLIP-seq
MIRT1529557	hsa-miR-4446-5p	CLIP-seq
MIRT2379443	hsa-miR-4533	CLIP-seq
MIRT2379444	hsa-miR-4643	CLIP-seq
MIRT2671474	hsa-miR-4647	CLIP-seq
MIRT2671475	hsa-miR-4662b	CLIP-seq
MIRT2464358	hsa-miR-4753-3p	CLIP-seq
MIRT2379445	hsa-miR-4753-5p	CLIP-seq
MIRT2671476	hsa-miR-4797-3p	CLIP-seq
MIRT2379446	hsa-miR-642b	CLIP-seq
MIRT1529562	hsa-miR-654-3p	CLIP-seq
MIRT1529563	hsa-miR-942	CLIP-seq

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GO ID	Ontology	Definition	Evidence	Reference
GO:0000977	Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0003677	Function	DNA binding	IEA
GO:0005515	Function	Protein binding	IPI	16189514, 25416956, 29892012, 32296183
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0006355	Process	Regulation of DNA-templated transcription	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0046872	Function	Metal ion binding	IEA

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Q9BR84

Protein name

Zinc finger protein 559

Protein function

May be involved in transcriptional regulation.

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF01352	KRAB	13 → 54	KRAB box	Family
PF00096	zf-C2H2	241 → 263	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	297 → 319	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	325 → 347	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	353 → 375	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	381 → 403	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	409 → 431	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	437 → 459	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	465 → 487	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	493 → 515	Zinc finger, C2H2 type	Domain

Sequence

MVAGWLTNYSQDSVTFEDVAVDFTQEEWTLLDQTQRNLYRDVMLENYKNLVAVDWESHIN
TKWSAPQQNFLQGKTSSVVEMERNHFGEELFDFNQCEKALSEHSCLKTHRRTYFRKKTCE
CNQCEKAFRKPSIFTLHKKTDIGEELPNCNQCETAFSQHLHLVCKKTSQNLHLVCKKTHT
QEKPYKCSDCEKGLPSSSHLRECVRIYGGERPYTHKEYVETFSHSTALFVHMQTQDGEKF
YECKACGKPFTESSYLTQHLRTHSRVLPIEHKKFGKAFAFSPDLAKHIRLRTRGKHYVCN
ECGKEFTCFSKLNIHIRVHTGEKPYECNKCGKAFTDSSGLIKHRRTHTGEKPYECKECGK
AFANSSHLTVHMRTHTGEKPYQCKECGKAFINSSSFKSHMQTHPGVKPYDCQQCGKAFIR
SSFLIRHLRSHSAERPFECEECGKAFRYSSHLSQHKRIHTGERPYKCQKCGQAFSISSGL
TVHMRTHTGERPFECQECGKAFTRSTYLIRHLRSHSVEKPYKECGQTFSNSSCLTECV

Sequence length

538

Interactions

View interactions

	Reactome
			Generic Transcription Pathway

ZNF559 (zinc finger protein 559)