Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	84319
Gene name Gene Name - the full gene name approved by the HGNC.	Cms1 ribosomal small subunit homolog
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	CMSS1
Synonyms (NCBI Gene) Gene synonyms aliases	C3orf26
Chromosome Chromosome number	3
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	3q12.1

Show/Hide all(57)

miRTarBase ID	miRNA	Experiments	Reference
MIRT020861	hsa-miR-155-5p	Proteomics	18668040
MIRT526945	hsa-miR-4323	PAR-CLIP	20371350
MIRT526946	hsa-miR-4687-5p	PAR-CLIP	20371350
MIRT526944	hsa-miR-4758-3p	PAR-CLIP	20371350
MIRT526943	hsa-miR-4290	PAR-CLIP	20371350
MIRT526945	hsa-miR-4323	PAR-CLIP	22012620
MIRT526946	hsa-miR-4687-5p	PAR-CLIP	22012620
MIRT526944	hsa-miR-4758-3p	PAR-CLIP	22012620
MIRT526943	hsa-miR-4290	PAR-CLIP	22012620
MIRT526942	hsa-miR-5196-3p	PAR-CLIP	22012620
MIRT526941	hsa-miR-5193	PAR-CLIP	22012620
MIRT526940	hsa-miR-660-3p	PAR-CLIP	22012620
MIRT526939	hsa-miR-4324	PAR-CLIP	22012620
MIRT526938	hsa-miR-544b	PAR-CLIP	22012620
MIRT526937	hsa-miR-486-5p	PAR-CLIP	22012620
MIRT526936	hsa-miR-4649-3p	PAR-CLIP	22012620
MIRT526935	hsa-miR-5008-5p	PAR-CLIP	22012620
MIRT526934	hsa-miR-6089	PAR-CLIP	22012620
MIRT526933	hsa-miR-6778-3p	PAR-CLIP	22012620
MIRT526932	hsa-miR-2355-5p	PAR-CLIP	22012620
MIRT526931	hsa-miR-1200	PAR-CLIP	22012620
MIRT444719	hsa-miR-548e-5p	PAR-CLIP	22100165
MIRT444718	hsa-miR-4282	PAR-CLIP	22100165
MIRT444717	hsa-miR-100-3p	PAR-CLIP	22100165
MIRT444716	hsa-miR-3163	PAR-CLIP	22100165
MIRT444719	hsa-miR-548e-5p	PAR-CLIP	22100165
MIRT444718	hsa-miR-4282	PAR-CLIP	22100165
MIRT444717	hsa-miR-100-3p	PAR-CLIP	22100165
MIRT444716	hsa-miR-3163	PAR-CLIP	22100165
MIRT526945	hsa-miR-4323	PAR-CLIP	20371350
MIRT526946	hsa-miR-4687-5p	PAR-CLIP	20371350
MIRT526944	hsa-miR-4758-3p	PAR-CLIP	20371350
MIRT526943	hsa-miR-4290	PAR-CLIP	20371350
MIRT526945	hsa-miR-4323	PAR-CLIP	22012620
MIRT526946	hsa-miR-4687-5p	PAR-CLIP	22012620
MIRT526944	hsa-miR-4758-3p	PAR-CLIP	22012620
MIRT526943	hsa-miR-4290	PAR-CLIP	22012620
MIRT526942	hsa-miR-5196-3p	PAR-CLIP	22012620
MIRT526941	hsa-miR-5193	PAR-CLIP	22012620
MIRT526940	hsa-miR-660-3p	PAR-CLIP	22012620
MIRT526939	hsa-miR-4324	PAR-CLIP	22012620
MIRT526938	hsa-miR-544b	PAR-CLIP	22012620
MIRT526937	hsa-miR-486-5p	PAR-CLIP	22012620
MIRT526936	hsa-miR-4649-3p	PAR-CLIP	22012620
MIRT526935	hsa-miR-5008-5p	PAR-CLIP	22012620
MIRT526934	hsa-miR-6089	PAR-CLIP	22012620
MIRT526933	hsa-miR-6778-3p	PAR-CLIP	22012620
MIRT526932	hsa-miR-2355-5p	PAR-CLIP	22012620
MIRT526931	hsa-miR-1200	PAR-CLIP	22012620
MIRT444719	hsa-miR-548e-5p	PAR-CLIP	22100165
MIRT444718	hsa-miR-4282	PAR-CLIP	22100165
MIRT444717	hsa-miR-100-3p	PAR-CLIP	22100165
MIRT444716	hsa-miR-3163	PAR-CLIP	22100165
MIRT444719	hsa-miR-548e-5p	PAR-CLIP	22100165
MIRT444718	hsa-miR-4282	PAR-CLIP	22100165
MIRT444717	hsa-miR-100-3p	PAR-CLIP	22100165
MIRT444716	hsa-miR-3163	PAR-CLIP	22100165

Show/Hide all(2)

GO ID	Ontology	Definition	Evidence	Reference
GO:0003723	Function	RNA binding	HDA	22658674, 22681889
GO:0005515	Function	Protein binding	IPI	32814053

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Protein

UniProt ID

Q9BQ75

Protein name

Protein CMSS1 (Cms1 ribosomal small subunit homolog)

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF14617	CMS1	45 → 275	U3-containing 90S pre-ribosomal complex subunit	Family

Sequence

MADDLGDEWWENQPTGAGSSPEASDGEGEGDTEVMQQETVPVPVPSEKTKQPKECFLIQP
KERKENTTKTRKRRKKKITDVLAKSEPKPGLPEDLQKLMKDYYSSRRLVIELEELNLPDS
CFLKANDLTHSLSSYLKEICPKWVKLRKNHSEKKSVLMLIICSSAVRALELIRSMTAFRG
DGKVIKLFAKHIKVQAQVKLLEKRVVHLGVGTPGRIKELVKQGGLNLSPLKFLVFDWNWR
DQKLRRMMDIPEIRKEVFELLEMGVLSLCKSESLKLGLF

Sequence length

279

Interactions

View interactions

Show/Hide Unknown Diseases (2)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Breast Cancer	Breast cancer	N/A	N/A	GWAS
Cleft Lip With Or Without Cleft Palate	Cleft lip with or without cleft palate	N/A	N/A	GWAS

Show/Hide Text Mining Associations (1)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Lymphoma Large B Cell Diffuse	Associate	33749163

CMSS1 (cms1 ribosomal small subunit homolog)