Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
84294
Gene name Gene Name - the full gene name approved by the HGNC.
UTP23 small subunit processome component
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
UTP23
Synonyms (NCBI Gene) Gene synonyms aliases
C8orf53
Chromosome Chromosome number
8
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
8q24.11
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT031537 hsa-miR-16-5p Proteomics 18668040
MIRT1481225 hsa-miR-1193 CLIP-seq
MIRT1481226 hsa-miR-1208 CLIP-seq
MIRT1481227 hsa-miR-122 CLIP-seq
MIRT1481228 hsa-miR-1226 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000480 Process Endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
GO:0003723 Function RNA binding HDA 22658674
GO:0003730 Function MRNA 3'-UTR binding IDA 16213212
GO:0005515 Function Protein binding IPI 25416956, 32296183
GO:0005634 Component Nucleus IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
HGNC N/A HGNC
Protein
UniProt ID Q9BRU9
Protein name rRNA-processing protein UTP23 homolog
Protein function Involved in rRNA-processing and ribosome biogenesis.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF04900 Fcf1 51 149 Fcf1 Family
Sequence
MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLC
TTRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEEGNPHHYFVAT
QDQNLSVKVKKKPGVPLMFIIQNTMVLDK
PSPKTIAFVKAVESGQLVSVHEKESIKHLKE
EQGLVKNTEQSRRKKRKKISGPNPLSCLKKKKKAPDTQSSASEKKRKRKRIRNRSNPKVL
SEKQNAEGE
Sequence length 249
Interactions View interactions
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Colorectal Cancer Colorectal cancer N/A N/A GWAS
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
Colorectal Neoplasms Associate 22367214, 26553438
Ovarian Neoplasms Associate 31540773