RTL6 (retrotransposon Gag like 6)

Gene

• Entrez ID: 84247
• Gene name: Retrotransposon Gag like 6
• Gene symbol: RTL6
• Synonyms (NCBI Gene): LDOC1L, Mar6, Mart6, SIRH3, dJ1033E15.2
• Chromosome: 22
• Chromosome location: 22q13.31

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT506747	hsa-miR-8485	PAR-CLIP	20371350
MIRT506746	hsa-miR-4789-3p	PAR-CLIP	20371350
MIRT506748	hsa-miR-29a-3p	PAR-CLIP	20371350
MIRT506750	hsa-miR-29b-3p	PAR-CLIP	20371350
MIRT506749	hsa-miR-29c-3p	PAR-CLIP	20371350
MIRT506747	hsa-miR-8485	PAR-CLIP	20371350
MIRT506746	hsa-miR-4789-3p	PAR-CLIP	20371350
MIRT506748	hsa-miR-29a-3p	PAR-CLIP	20371350
MIRT506750	hsa-miR-29b-3p	PAR-CLIP	20371350
MIRT506749	hsa-miR-29c-3p	PAR-CLIP	20371350
MIRT556610	hsa-miR-1277-5p	PAR-CLIP	20371350
MIRT556609	hsa-miR-4523	PAR-CLIP	20371350
MIRT301936	hsa-miR-5011-5p	PAR-CLIP	20371350
MIRT556608	hsa-miR-3200-5p	PAR-CLIP	20371350
MIRT556607	hsa-miR-4750-3p	PAR-CLIP	20371350
MIRT556606	hsa-miR-302b-5p	PAR-CLIP	20371350
MIRT556605	hsa-miR-302d-5p	PAR-CLIP	20371350
MIRT556604	hsa-miR-3670	PAR-CLIP	20371350
MIRT556603	hsa-miR-889-3p	PAR-CLIP	20371350
MIRT556602	hsa-miR-485-3p	PAR-CLIP	20371350
MIRT556601	hsa-miR-539-3p	PAR-CLIP	20371350
MIRT556600	hsa-miR-4256	PAR-CLIP	20371350
MIRT506747	hsa-miR-8485	PAR-CLIP	20371350
MIRT506746	hsa-miR-4789-3p	PAR-CLIP	20371350
MIRT506748	hsa-miR-29a-3p	PAR-CLIP	20371350
MIRT506750	hsa-miR-29b-3p	PAR-CLIP	20371350
MIRT506749	hsa-miR-29c-3p	PAR-CLIP	20371350
MIRT556610	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT556609	hsa-miR-4523	PAR-CLIP	21572407
MIRT301936	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT556608	hsa-miR-3200-5p	PAR-CLIP	21572407
MIRT556607	hsa-miR-4750-3p	PAR-CLIP	21572407
MIRT556606	hsa-miR-302b-5p	PAR-CLIP	21572407
MIRT556605	hsa-miR-302d-5p	PAR-CLIP	21572407
MIRT556604	hsa-miR-3670	PAR-CLIP	21572407
MIRT556603	hsa-miR-889-3p	PAR-CLIP	21572407
MIRT556602	hsa-miR-485-3p	PAR-CLIP	21572407
MIRT556601	hsa-miR-539-3p	PAR-CLIP	21572407
MIRT556600	hsa-miR-4256	PAR-CLIP	21572407
MIRT506747	hsa-miR-8485	PAR-CLIP	21572407
MIRT506746	hsa-miR-4789-3p	PAR-CLIP	21572407
MIRT506748	hsa-miR-29a-3p	PAR-CLIP	21572407
MIRT506750	hsa-miR-29b-3p	PAR-CLIP	21572407
MIRT506749	hsa-miR-29c-3p	PAR-CLIP	21572407
MIRT506747	hsa-miR-8485	PAR-CLIP	23446348
MIRT506746	hsa-miR-4789-3p	PAR-CLIP	23446348
MIRT506748	hsa-miR-29a-3p	PAR-CLIP	23446348
MIRT506750	hsa-miR-29b-3p	PAR-CLIP	23446348
MIRT506749	hsa-miR-29c-3p	PAR-CLIP	23446348
MIRT506750	hsa-miR-29b-3p	PAR-CLIP	23446348
MIRT506749	hsa-miR-29c-3p	PAR-CLIP	23446348
MIRT506748	hsa-miR-29a-3p	PAR-CLIP	23446348
MIRT506747	hsa-miR-8485	PAR-CLIP	23446348
MIRT506746	hsa-miR-4789-3p	PAR-CLIP	23446348
MIRT440334	hsa-miR-377-3p	HITS-CLIP	24374217
MIRT440335	hsa-miR-770-5p	HITS-CLIP	24374217
MIRT440334	hsa-miR-377-3p	HITS-CLIP	24374217
MIRT440335	hsa-miR-770-5p	HITS-CLIP	24374217

Other IDs

• MIM: 621006
• HGNC: 13343
• e!Ensembl: ENSG00000188636

Protein

• UniProt ID: Q6ICC9
• Protein name: Retrotransposon Gag-like protein 6 (Leucine zipper protein down-regulated in cancer cells-like) (Mammalian retrotransposon-derived protein 6) (Protein LDOC1L)
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF16297	DUF4939	83 → 179	Domain of unknown function (DUF4939)	Family

• Sequence:

  MVQPQTSKAESPALAASPNAQMDDVIDTLTSLRLTNSALRREASTLRAEKANLTNMLESV
  MAELTLLRTRARIPGALQITPPISSITSNGTRPMTTPPTSLPEPFSGDPGRLAGFLMQMD
  RFMIFQASRFPGEAERVAFLVSRLTGEAEKWAIPHMQPDSPLRNNYQGFLAELRRTYKSP
  LRHARRAQIRKTSASNRAVRERQMLCRQLASAGTGPCPVHPASNGTSPAPALPARARNL

• Sequence length: 239