ZCCHC7 (zinc finger CCHC-type containing 7)

Gene

• Entrez ID: 84186
• Gene name: Zinc finger CCHC-type containing 7
• Gene symbol: ZCCHC7
• Synonyms (NCBI Gene): AIR1, HSPC086
• Chromosome: 9
• Chromosome location: 9p13.2

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT044027	hsa-miR-365a-3p	CLASH	23622248
MIRT439245	ebv-miR-BART7-3p	HITS-CLIP	22473208
MIRT439245	ebv-miR-BART7-3p	HITS-CLIP	22473208
MIRT1507421	hsa-miR-1272	CLIP-seq
MIRT1507422	hsa-miR-127-5p	CLIP-seq
MIRT1507423	hsa-miR-3127-5p	CLIP-seq
MIRT1507424	hsa-miR-3158-3p	CLIP-seq
MIRT1507425	hsa-miR-3918	CLIP-seq
MIRT1507426	hsa-miR-3938	CLIP-seq
MIRT1507427	hsa-miR-425	CLIP-seq
MIRT1507428	hsa-miR-628-5p	CLIP-seq
MIRT1507429	hsa-miR-670	CLIP-seq
MIRT2152847	hsa-miR-3660	CLIP-seq
MIRT2152848	hsa-miR-3973	CLIP-seq
MIRT2152849	hsa-miR-4256	CLIP-seq
MIRT2152850	hsa-miR-4526	CLIP-seq
MIRT2152851	hsa-miR-4699-5p	CLIP-seq
MIRT2152852	hsa-miR-549	CLIP-seq
MIRT2152853	hsa-miR-578	CLIP-seq
MIRT2373198	hsa-miR-128	CLIP-seq
MIRT2373199	hsa-miR-154	CLIP-seq
MIRT2373200	hsa-miR-3646	CLIP-seq
MIRT2152847	hsa-miR-3660	CLIP-seq
MIRT2373201	hsa-miR-3926	CLIP-seq
MIRT2152850	hsa-miR-4526	CLIP-seq
MIRT2373202	hsa-miR-4753-5p	CLIP-seq
MIRT2152852	hsa-miR-549	CLIP-seq
MIRT2666048	hsa-miR-1243	CLIP-seq
MIRT2666049	hsa-miR-1245	CLIP-seq
MIRT2666050	hsa-miR-1253	CLIP-seq
MIRT1507422	hsa-miR-127-5p	CLIP-seq
MIRT2373199	hsa-miR-154	CLIP-seq
MIRT2666051	hsa-miR-2052	CLIP-seq
MIRT2666052	hsa-miR-2355-3p	CLIP-seq
MIRT2666053	hsa-miR-3074-5p	CLIP-seq
MIRT2666054	hsa-miR-3117-5p	CLIP-seq
MIRT1507423	hsa-miR-3127-5p	CLIP-seq
MIRT1507424	hsa-miR-3158-3p	CLIP-seq
MIRT2666055	hsa-miR-3168	CLIP-seq
MIRT2666056	hsa-miR-3613-3p	CLIP-seq
MIRT2666057	hsa-miR-3654	CLIP-seq
MIRT1507425	hsa-miR-3918	CLIP-seq
MIRT2666058	hsa-miR-3925-5p	CLIP-seq
MIRT1507426	hsa-miR-3938	CLIP-seq
MIRT2666059	hsa-miR-4307	CLIP-seq
MIRT2666060	hsa-miR-4645-3p	CLIP-seq
MIRT2666061	hsa-miR-4646-3p	CLIP-seq
MIRT2666062	hsa-miR-4696	CLIP-seq
MIRT2152851	hsa-miR-4699-5p	CLIP-seq
MIRT2666063	hsa-miR-4703-3p	CLIP-seq
MIRT2666064	hsa-miR-4712-3p	CLIP-seq
MIRT2666065	hsa-miR-4729	CLIP-seq
MIRT2666066	hsa-miR-4742-3p	CLIP-seq
MIRT2666067	hsa-miR-486-5p	CLIP-seq
MIRT2666068	hsa-miR-494	CLIP-seq
MIRT2666069	hsa-miR-548c-3p	CLIP-seq
MIRT1507428	hsa-miR-628-5p	CLIP-seq
MIRT1507429	hsa-miR-670	CLIP-seq
MIRT2666048	hsa-miR-1243	CLIP-seq
MIRT2666050	hsa-miR-1253	CLIP-seq
MIRT1507422	hsa-miR-127-5p	CLIP-seq
MIRT2373199	hsa-miR-154	CLIP-seq
MIRT2666053	hsa-miR-3074-5p	CLIP-seq
MIRT2666055	hsa-miR-3168	CLIP-seq
MIRT2666056	hsa-miR-3613-3p	CLIP-seq
MIRT2666057	hsa-miR-3654	CLIP-seq
MIRT2666058	hsa-miR-3925-5p	CLIP-seq
MIRT2666062	hsa-miR-4696	CLIP-seq
MIRT2666063	hsa-miR-4703-3p	CLIP-seq
MIRT2666064	hsa-miR-4712-3p	CLIP-seq
MIRT2666065	hsa-miR-4729	CLIP-seq
MIRT2666066	hsa-miR-4742-3p	CLIP-seq
MIRT2666067	hsa-miR-486-5p	CLIP-seq
MIRT2666069	hsa-miR-548c-3p	CLIP-seq
MIRT1507428	hsa-miR-628-5p	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0003676	Function	Nucleic acid binding	IEA
GO:0003723	Function	RNA binding	HDA	22658674
GO:0003723	Function	RNA binding	IBA
GO:0005515	Function	Protein binding	IPI	25416956, 25556234, 32296183
GO:0005634	Component	Nucleus	IEA
GO:0005730	Component	Nucleolus	IDA
GO:0005730	Component	Nucleolus	IEA
GO:0005829	Component	Cytosol	IDA
GO:0008270	Function	Zinc ion binding	IEA
GO:0031499	Component	TRAMP complex	IBA
GO:0046872	Function	Metal ion binding	IEA
GO:0071031	Process	Nuclear mRNA surveillance of mRNA 3'-end processing	IBA
GO:0071035	Process	Nuclear polyadenylation-dependent rRNA catabolic process	IBA
GO:0071036	Process	Nuclear polyadenylation-dependent snoRNA catabolic process	IBA
GO:0071037	Process	Nuclear polyadenylation-dependent snRNA catabolic process	IBA
GO:0071038	Process	TRAMP-dependent tRNA surveillance pathway	IBA
GO:0071039	Process	Nuclear polyadenylation-dependent CUT catabolic process	IBA

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: Q8N3Z6
• Protein name: Zinc finger CCHC domain-containing protein 7 (TRAMP-like complex RNA-binding factor ZCCHC7)
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF00098	zf-CCHC	241 → 258	Zinc knuckle	Domain

• Sequence:

  MMFGGYETIEAYEDDLYRDESSSELSVDSEVEFQLYSQIHYAQDLDDVIREEEHEEKNSG
  NSESSSSKPNQKKLIVLSDSEVIQLSDGSEVITLSDEDSIYRCKGKNVRVQAQENAHGLS
  SSLQSNELVDKKCKSDIEKPKSEERSGVIREVMIIEVSSSEEEESTISEGDNVESWMLLG
  CEVDDKDDDILLNLVGCENSVTEGEDGINWSISDKDIEAQIANNRTPGRWTQRYYSANKN
  IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHSCLFRH
  SWDKQCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSALAYCYHCAQKGHYG
  HECPEREVYDPSPVSPFICYYDDKYEIQEREKRLKQKIKVLKKNGVIPEPSKLPYIKAAN
  ENPHHDIRKGRASWKSNRWPQENKETQKEMKNKNRNWEKHRKADRHREVDEDFPRGPKTY
  SSPGSFKTQKPSKPFHRSSHYHTSREDKSPKEGKRGKQKKKERCWEDDDNDNLFLIKQRK
  KKS

• Sequence length: 543

Pathways

KEGG:

RNA degradation