Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	84186
Gene name Gene Name - the full gene name approved by the HGNC.	Zinc finger CCHC-type containing 7
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	ZCCHC7
Synonyms (NCBI Gene) Gene synonyms aliases	AIR1, HSPC086
Chromosome Chromosome number	9
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	9p13.2

Show/Hide all(75)

miRTarBase ID	miRNA	Experiments	Reference
MIRT044027	hsa-miR-365a-3p	CLASH	23622248
MIRT439245	ebv-miR-BART7-3p	HITS-CLIP	22473208
MIRT439245	ebv-miR-BART7-3p	HITS-CLIP	22473208
MIRT1507421	hsa-miR-1272	CLIP-seq
MIRT1507422	hsa-miR-127-5p	CLIP-seq
MIRT1507423	hsa-miR-3127-5p	CLIP-seq
MIRT1507424	hsa-miR-3158-3p	CLIP-seq
MIRT1507425	hsa-miR-3918	CLIP-seq
MIRT1507426	hsa-miR-3938	CLIP-seq
MIRT1507427	hsa-miR-425	CLIP-seq
MIRT1507428	hsa-miR-628-5p	CLIP-seq
MIRT1507429	hsa-miR-670	CLIP-seq
MIRT2152847	hsa-miR-3660	CLIP-seq
MIRT2152848	hsa-miR-3973	CLIP-seq
MIRT2152849	hsa-miR-4256	CLIP-seq
MIRT2152850	hsa-miR-4526	CLIP-seq
MIRT2152851	hsa-miR-4699-5p	CLIP-seq
MIRT2152852	hsa-miR-549	CLIP-seq
MIRT2152853	hsa-miR-578	CLIP-seq
MIRT2373198	hsa-miR-128	CLIP-seq
MIRT2373199	hsa-miR-154	CLIP-seq
MIRT2373200	hsa-miR-3646	CLIP-seq
MIRT2152847	hsa-miR-3660	CLIP-seq
MIRT2373201	hsa-miR-3926	CLIP-seq
MIRT2152850	hsa-miR-4526	CLIP-seq
MIRT2373202	hsa-miR-4753-5p	CLIP-seq
MIRT2152852	hsa-miR-549	CLIP-seq
MIRT2666048	hsa-miR-1243	CLIP-seq
MIRT2666049	hsa-miR-1245	CLIP-seq
MIRT2666050	hsa-miR-1253	CLIP-seq
MIRT1507422	hsa-miR-127-5p	CLIP-seq
MIRT2373199	hsa-miR-154	CLIP-seq
MIRT2666051	hsa-miR-2052	CLIP-seq
MIRT2666052	hsa-miR-2355-3p	CLIP-seq
MIRT2666053	hsa-miR-3074-5p	CLIP-seq
MIRT2666054	hsa-miR-3117-5p	CLIP-seq
MIRT1507423	hsa-miR-3127-5p	CLIP-seq
MIRT1507424	hsa-miR-3158-3p	CLIP-seq
MIRT2666055	hsa-miR-3168	CLIP-seq
MIRT2666056	hsa-miR-3613-3p	CLIP-seq
MIRT2666057	hsa-miR-3654	CLIP-seq
MIRT1507425	hsa-miR-3918	CLIP-seq
MIRT2666058	hsa-miR-3925-5p	CLIP-seq
MIRT1507426	hsa-miR-3938	CLIP-seq
MIRT2666059	hsa-miR-4307	CLIP-seq
MIRT2666060	hsa-miR-4645-3p	CLIP-seq
MIRT2666061	hsa-miR-4646-3p	CLIP-seq
MIRT2666062	hsa-miR-4696	CLIP-seq
MIRT2152851	hsa-miR-4699-5p	CLIP-seq
MIRT2666063	hsa-miR-4703-3p	CLIP-seq
MIRT2666064	hsa-miR-4712-3p	CLIP-seq
MIRT2666065	hsa-miR-4729	CLIP-seq
MIRT2666066	hsa-miR-4742-3p	CLIP-seq
MIRT2666067	hsa-miR-486-5p	CLIP-seq
MIRT2666068	hsa-miR-494	CLIP-seq
MIRT2666069	hsa-miR-548c-3p	CLIP-seq
MIRT1507428	hsa-miR-628-5p	CLIP-seq
MIRT1507429	hsa-miR-670	CLIP-seq
MIRT2666048	hsa-miR-1243	CLIP-seq
MIRT2666050	hsa-miR-1253	CLIP-seq
MIRT1507422	hsa-miR-127-5p	CLIP-seq
MIRT2373199	hsa-miR-154	CLIP-seq
MIRT2666053	hsa-miR-3074-5p	CLIP-seq
MIRT2666055	hsa-miR-3168	CLIP-seq
MIRT2666056	hsa-miR-3613-3p	CLIP-seq
MIRT2666057	hsa-miR-3654	CLIP-seq
MIRT2666058	hsa-miR-3925-5p	CLIP-seq
MIRT2666062	hsa-miR-4696	CLIP-seq
MIRT2666063	hsa-miR-4703-3p	CLIP-seq
MIRT2666064	hsa-miR-4712-3p	CLIP-seq
MIRT2666065	hsa-miR-4729	CLIP-seq
MIRT2666066	hsa-miR-4742-3p	CLIP-seq
MIRT2666067	hsa-miR-486-5p	CLIP-seq
MIRT2666069	hsa-miR-548c-3p	CLIP-seq
MIRT1507428	hsa-miR-628-5p	CLIP-seq

Show/Hide all(17)

GO ID	Ontology	Definition	Evidence	Reference
GO:0003676	Function	Nucleic acid binding	IEA
GO:0003723	Function	RNA binding	HDA	22658674
GO:0003723	Function	RNA binding	IBA
GO:0005515	Function	Protein binding	IPI	25416956, 25556234, 32296183
GO:0005634	Component	Nucleus	IEA
GO:0005730	Component	Nucleolus	IDA
GO:0005730	Component	Nucleolus	IEA
GO:0005829	Component	Cytosol	IDA
GO:0008270	Function	Zinc ion binding	IEA
GO:0031499	Component	TRAMP complex	IBA
GO:0046872	Function	Metal ion binding	IEA
GO:0071031	Process	Nuclear mRNA surveillance of mRNA 3'-end processing	IBA
GO:0071035	Process	Nuclear polyadenylation-dependent rRNA catabolic process	IBA
GO:0071036	Process	Nuclear polyadenylation-dependent snoRNA catabolic process	IBA
GO:0071037	Process	Nuclear polyadenylation-dependent snRNA catabolic process	IBA
GO:0071038	Process	TRAMP-dependent tRNA surveillance pathway	IBA
GO:0071039	Process	Nuclear polyadenylation-dependent CUT catabolic process	IBA

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Protein

UniProt ID

Q8N3Z6

Protein name

Zinc finger CCHC domain-containing protein 7 (TRAMP-like complex RNA-binding factor ZCCHC7)

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00098	zf-CCHC	241 → 258	Zinc knuckle	Domain

Sequence

MMFGGYETIEAYEDDLYRDESSSELSVDSEVEFQLYSQIHYAQDLDDVIREEEHEEKNSG
NSESSSSKPNQKKLIVLSDSEVIQLSDGSEVITLSDEDSIYRCKGKNVRVQAQENAHGLS
SSLQSNELVDKKCKSDIEKPKSEERSGVIREVMIIEVSSSEEEESTISEGDNVESWMLLG
CEVDDKDDDILLNLVGCENSVTEGEDGINWSISDKDIEAQIANNRTPGRWTQRYYSANKN
IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHSCLFRH
SWDKQCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSALAYCYHCAQKGHYG
HECPEREVYDPSPVSPFICYYDDKYEIQEREKRLKQKIKVLKKNGVIPEPSKLPYIKAAN
ENPHHDIRKGRASWKSNRWPQENKETQKEMKNKNRNWEKHRKADRHREVDEDFPRGPKTY
SSPGSFKTQKPSKPFHRSSHYHTSREDKSPKEGKRGKQKKKERCWEDDDNDNLFLIKQRK
KKS

Sequence length

543

Interactions

View interactions

	KEGG
	RNA degradation

Show/Hide Unknown Diseases (6)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Bipolar Disorder	Bipolar disorder	N/A	N/A	GWAS
Dementia	Dementia	N/A	N/A	GWAS
Hypertension	Hypertension (confirmatory factor analysis Factor 12)	N/A	N/A	GWAS
Mental Depression	Major depressive disorder	N/A	N/A	GWAS
Metabolic Syndrome	Metabolic syndrome	N/A	N/A	GWAS
Schizophrenia	Schizophrenia	N/A	N/A	GWAS

Show/Hide Text Mining Associations (5)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Lymphoma	Associate	38049665
Lymphoma B Cell	Associate	38049665
Lymphoma Large B Cell Diffuse	Associate	33749163
Neoplasms	Associate	34040254
Salivary Gland Neoplasms	Associate	33878706

ZCCHC7 (zinc finger CCHC-type containing 7)