Gene Gene information from NCBI Gene database.
Entrez ID 84133
Gene name Zinc and ring finger 3
Gene symbol ZNRF3
Synonyms (NCBI Gene)
BK747E2.3RNF203
Chromosome 22
Chromosome location 22q12.1
miRNA miRNA information provided by mirtarbase database.
456
miRTarBase ID miRNA Experiments Reference
MIRT027017 hsa-miR-103a-3p Sequencing 20371350
MIRT031450 hsa-miR-16-5p Sequencing 20371350
MIRT042789 hsa-miR-339-5p CLASH 23622248
MIRT438327 hsa-miR-146b-5p qRT-PCR 24064622
MIRT438327 hsa-miR-146b-5p qRT-PCR 24064622
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
35
GO ID Ontology Definition Evidence Reference
GO:0004842 Function Ubiquitin-protein transferase activity IDA 22575959
GO:0005109 Function Frizzled binding IBA
GO:0005109 Function Frizzled binding IEA
GO:0005109 Function Frizzled binding IPI 22575959
GO:0005515 Function Protein binding IPI 22575959, 24165923, 29769720, 31073040, 32296183
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
612062 18126 ENSG00000183579
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9ULT6
Protein name E3 ubiquitin-protein ligase ZNRF3 (EC 2.3.2.27) (RING finger protein 203) (RING-type E3 ubiquitin transferase ZNRF3) (Zinc/RING finger protein 3)
Protein function E3 ubiquitin-protein ligase that acts as a negative regulator of the Wnt signaling pathway by mediating the ubiquitination and subsequent degradation of Wnt receptor complex components Frizzled and LRP6. Acts on both canonical and non-canonical
PDB 8G4Y , 8XFP , 8XFS , 8XFT , 8Y69
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF18212 ZNRF_3_ecto 101 208 ZNRF-3 Ectodomain Domain
PF17123 zf-RING_11 292 320 RING-like zinc finger Domain
Sequence
MRPRSGGRPGATGRRRRRLRRRPRGLRCSRLPPPPPLPLLLGLLLAAAGPGAARAKETAF
VEVVLFESSPSGDYTTYTTGLTGRFSRAGATLSAEGEIVQMHPLGLCNNNDEEDLYEYGW
VGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPV
VYVKGADAIKLMNIVNKQKVARARIQHR
PPRQPTEYFDMGIFLAFFVVVSLVCLILLVKI
KLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKY
IDGEELRVIPCTHRFHRKCV
DPWLLQHHTCPHCRHNIIEQKGNPSAVCVETSNLSRGRQQ
RVTLPVHYPGRVHRTNAIPAYPTRTSMDSHGNPVTLLTMDRHGEQSLYSPQTPAYIRSYP
PLHLDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYETMYQHYYFQGLSYP
EQEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGSTSSFSCYHGHRSVCS
GYLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCSTFRSSLSSDYDPFIYR
SRSPCRASEAGGSGSSGRGPALCFEGSPPPEELPAVHSHGAGRGEPWPGPASPSGDQVST
CSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPDLRRTWKGGHELPSCACCCEPQPSP
AGPSAGAAGSSTLFLGPHLYEGSGPAGGEPQSGSSQGLYGLHPDHLPRTDGVKYEGLPCC
FYEEKQVARGGGGGSGCYTEDYSVSVQYTLTEEPPPGCYPGARDLSQRIPIIPEDVDCDL
GLPSDCQGTHSLGSWGGTRGPDTPRPHRGLGATREEERALCCQARALLRPGCPPEEAGAV
RANFPSALQDTQESSTTATEAAGPRSHSADSSSPGA
Sequence length 936
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Wnt signaling pathway   Regulation of FZD by ubiquitination
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
10
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
ZNRF3-related disorder Pathogenic rs2517532919, rs2517585923, rs2517589753, rs2517591405, rs2517591470, rs2517591496, rs2517591567 RCV004574948
RCV004574951
RCV004574953
RCV004574954
RCV004574955
RCV004574956
RCV004574957
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Adrenocortical Adenoma Associate 33564960
Adrenocortical Carcinoma Associate 25490274, 29581542, 29872083, 33513905, 33564960
Carcinogenesis Associate 27661107, 33513905, 35040131
Carcinoma Hepatocellular Associate 40264052
Carcinoma Squamous Cell Associate 28901451
Cardiotoxicity Associate 29247589
Chromosome Disorders Associate 36631813
Diabetic Nephropathies Associate 38189041
Disorder of Sex Development 46 XY Associate 36631813
Esophageal Squamous Cell Carcinoma Associate 30816445