Gene Gene information from NCBI Gene database.
Entrez ID 8291
Gene name Dysferlin
Gene symbol DYSF
Synonyms (NCBI Gene)
FER1L1LGMD2BLGMDR2MMD1
Chromosome 2
Chromosome location 2p13.2
Summary The protein encoded by this gene belongs to the ferlin family and is a skeletal muscle protein found associated with the sarcolemma. It is involved in muscle contraction and contains C2 domains that play a role in calcium-mediated membrane fusion events,
SNPs SNP information provided by dbSNP.
391
SNP ID Visualize variation Clinical significance Consequence
rs28937581 G>T Pathogenic Coding sequence variant, missense variant, non coding transcript variant
rs34061568 A>C Uncertain-significance, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant, non coding transcript variant
rs34387018 C>A,G,T Benign, conflicting-interpretations-of-pathogenicity Synonymous variant, coding sequence variant, missense variant, non coding transcript variant
rs34997054 G>A Benign-likely-benign, likely-pathogenic, benign Coding sequence variant, missense variant, non coding transcript variant
rs61746816 C>A,T Conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant, synonymous variant, non coding transcript variant
miRNA miRNA information provided by mirtarbase database.
11
miRTarBase ID miRNA Experiments Reference
MIRT949882 hsa-miR-1252 CLIP-seq
MIRT949883 hsa-miR-1275 CLIP-seq
MIRT949884 hsa-miR-3175 CLIP-seq
MIRT949885 hsa-miR-3940-5p CLIP-seq
MIRT949886 hsa-miR-4434 CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
35
GO ID Ontology Definition Evidence Reference
GO:0002280 Process Monocyte activation involved in immune response IEA
GO:0002280 Process Monocyte activation involved in immune response IMP 18276788
GO:0002281 Process Macrophage activation involved in immune response IEA
GO:0002281 Process Macrophage activation involved in immune response IMP 18276788
GO:0005509 Function Calcium ion binding IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
603009 3097 ENSG00000135636
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O75923
Protein name Dysferlin (Dystrophy-associated fer-1-like protein) (Fer-1-like protein 1)
Protein function Key calcium ion sensor involved in the Ca(2+)-triggered synaptic vesicle-plasma membrane fusion. Plays a role in the sarcolemma repair mechanism of both skeletal muscle and cardiomyocytes that permits rapid resealing of membranes disrupted by me
PDB 4CAH , 4CAI , 4IHB , 4IQH , 7JOF , 7K6B , 7KRB , 9B8K , 9B8L
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00168 C2 1 103 C2 domain Domain
PF00168 C2 220 323 C2 domain Domain
PF08151 FerI 324 374 FerI (NUC094) domain Domain
PF00168 C2 379 496 C2 domain Domain
PF08165 FerA 695 759 FerA (NUC095) domain Domain
PF08150 FerB 786 859 FerB (NUC096) domain Domain
PF00168 C2 1152 1260 C2 domain Domain
PF00168 C2 1333 1439 C2 domain Domain
PF00168 C2 1578 1678 C2 domain Domain
PF00168 C2 1812 1944 C2 domain Domain
PF16165 Ferlin_C 1971 2075 Ferlin C-terminus Family
Tissue specificity TISSUE SPECIFICITY: Expressed in skeletal muscle, myoblast, myotube and in the syncytiotrophoblast (STB) of the placenta (at protein level). Ubiquitous. Highly expressed in skeletal muscle. Also found in heart, brain, spleen, intestine, placenta and at lo
Sequence
MLRVFILYAENVHTPDTDISDAYCSAVFAGVKKRTKVIKNSVNPVWNEGFEWDLKGIPLD
QGSELHVVVKDHETMGRNRFLGEAKVPLREVLATPSLSASFNA
PLLDTKKQPTGASLVLQ
VSYTPLPGAVPLFPPPTPLEPSPTLPDLDVVADTGGEEDTEDQGLTGDEAEPFLDQSGGP
GAPTTPRKLPSRPPPHYPGIKRKRSAPTSRKLLSDKPQDFQIRVQVIEGRQLPGVNIKPV
VKVTAAGQTKRTRIHKGNSPLFNETLFFNLFDSPGELFDEPIFITVVDSRSLRTDALLGE
FRMDVGTIYREPRHAYLRKWLLL
SDPDDFSAGARGYLKTSLCVLGPGDEAPLERKDPSED
KEDIESNLLRPTGV
ALRGAHFCLKVFRAEDLPQMDDAVMDNVKQIFGFESNKKNLVDPFV
EVSFAGKMLCSKILEKTANPQWNQNITLPAMFPSMCEKMRIRIIDWDRLTHNDIVATTYL
SMSKISAPGGEIEEEP
AGAVKPSKASDLDDYLGFLPTFGPCYINLYGSPREFTGFPDPYT
ELNTGKGEGVAYRGRLLLSLETKLVEHSEQKVEDLPADDILRVEKYLRRRKYSLFAAFYS
ATMLQDVDDAIQFEVSIGNYGNKFDMTCLPLASTTQYSRAVFDGCHYYYLPWGNVKPVVV
LSSYWEDISHRIETQNQLLGIADRLEAGLEQVHLALKAQCSTEDVDSLVAQLTDELIAGC
SQPLGDIHETPSATHLDQYLYQLRTHHLSQITEAALALK
LGHSELPAALEQAEDWLLRLR
ALAEEPQNSLPDIVIWMLQGDKRVAYQRVPAHQVLFSRRGANYCGKNCGKLQTIFLKYPM
EKVPGARMPVQIRVKLWFG
LSVDEKEFNQFAEGKLSVFAETYENETKLALVGNWGTTGLT
YPKFSDVTGKIKLPKDSFRPSAGWTWAGDWFVCPEKTLLHDMDAGHLSFVEEVFENQTRL
PGGQWIYMSDNYTDVNGEKVLPKDDIECPLGWKWEDEEWSTDLNRAVDEQGWEYSITIPP
ERKPKHWVPAEKMYYTHRRRRWVRLRRRDLSQMEALKRHRQAEAEGEGWEYASLFGWKFH
LEYRKTDAFRRRRWRRRMEPLEKTGPAAVFALEGALGGVMDDKSEDSMSVSTLSFGVNRP
TISCIFDYGNRYHLRCYMYQARDLAAMDKDSFSDPYAIVSFLHQSQKTVVVKNTLNPTWD
QTLIFYEIEIFGEPATVAEQPPSIVVELYDHDTYGADEFMGRCICQPSLERMPRLAWFPL

TRGSQPSGELLASFELIQREKPAIHHIPGFEVQETSRILDESEDTDLPYPPPQREANIYM
VPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVVECGGQTVQSCVIRNLRKNPNF
DICTLFMEVMLPREELYCPPITVKVIDNRQFGRRPVVGQCTIRSLESFLCDPYSAESPS
P
QGGPDDVSLLSPGEDVLIDIDDKEPLIPIQEEEFIDWWSKFFASIGEREKCGSYLEKDFD
TLKVYDTQLENVEAFEGLSDFCNTFKLYRGKTQEETEDPSVIGEFKGLFKIYPLPEDPAI
PMPPRQFHQLAAQGPQECLVRIYIVRAFGLQPKDPNGKCDPYIKISIGKKSVSDQDNYIP
CTLEPVFGKMFELTCTLPLEKDLKITLYDYDLLSKDEKIGETVVDLENRLLSKFGARC
GL
PQTYCVSGPNQWRDQLRPSQLLHLFCQQHRVKAPVYRTDRVMFQDKEYSIEEIEAGRIPN
PHLGPVEERLALHVLQQQGLVPEHVESRPLYSPLQPDIEQGKLQMWVDLFPKALGRPGPP
FNITPRRARRFFLRCIIWNTRDVILDDLSLTGEKMSDIYVKGWMIGFEEHKQKTDVHYRS
LGGEGNFNWRFIFPFDYLPAEQVCTIAKKDAFWRLDKTESKIPARVVFQIWDNDKFSFDD
FLGSLQLDLNRMPKPAKTAKKCSL
DQLDDAFHPEWFVSLFEQKTVKGWWPCVAEEGEKKI
LAGKLEMTLEIVAESEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILW
RRFRWAIILFIILFILLLFLAIFIYAFPNYAAMKL
VKPFS
Sequence length 2080
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Smooth Muscle Contraction
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
5938
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Abnormality of the musculature Pathogenic; Likely pathogenic rs398123802, rs2152682705, rs2152728763, rs2152760967, rs2152855822, rs1558584694, rs2152940909, rs2152971975, rs369607332, rs121908955, rs758107024 RCV001814050
RCV001814314
RCV001814403
RCV001814514
RCV001814573
RCV001814339
RCV001814577
RCV001814444
RCV001814110
RCV001813961
RCV001814254
Absent muscle fiber dysferlin Pathogenic rs1553551006 RCV000626847
Acute myeloid leukemia Pathogenic; Likely pathogenic rs370874727, rs2152728575, rs886044537 RCV005889935
RCV005926827
RCV005895898
Autosomal recessive limb-girdle muscular dystrophy Pathogenic; Likely pathogenic rs398123763, rs398123764, rs202044973, rs398123767, rs398123768, rs398123770, rs377735262, rs398123774, rs140108514, rs398123782, rs398123787, rs398123788, rs398123789, rs141704244, rs398123793
View all (134 more)
RCV005600649
RCV006252429
RCV006445495
RCV006252430
RCV006249585
RCV006252431
RCV004998208
RCV005632227
RCV004998211
RCV004689448
RCV003993797
RCV005600652
RCV005600653
RCV005406809
RCV006252434
RCV006252435
RCV005600654
RCV004998216
RCV005252741
RCV003114244
RCV003317083
RCV003330426
RCV005600655
RCV006445498
RCV006252484
RCV005914903
RCV001553578
RCV005601789
RCV005864744
RCV001788847
RCV006448791
RCV005253971
RCV004690166
RCV005253904
RCV006252491
RCV005252773
RCV005055626
RCV002469027
RCV004999773
RCV005406580
RCV005864457
RCV006272102
RCV005254719
RCV003235095
RCV001804906
RCV004800315
RCV005600802
RCV002265663
RCV003155121
RCV005864462
RCV004998419
RCV005893611
RCV002509296
RCV005254664
RCV006445460
RCV005864434
RCV006252413
RCV005430920
RCV002298436
RCV004525846
RCV006252414
RCV003114177
RCV005237357
RCV006252415
RCV006252416
RCV005430921
RCV004525847
RCV004998078
RCV005252832
RCV003123434
RCV005419599
RCV003226741
RCV006252444
RCV003993912
RCV006252445
RCV005252849
RCV006252446
RCV004800370
RCV005600887
RCV005600888
RCV003317179
RCV003230988
RCV005632351
RCV004999208
RCV004999211
RCV001788187
RCV006445646
RCV006252447
RCV006252448
RCV006252449
RCV005864467
RCV003114448
RCV005864470
RCV005600893
RCV004999238
RCV004999239
RCV006445654
RCV005864471
RCV005600895
RCV006445656
RCV005864474
RCV004999247
RCV005864475
RCV006445657
RCV006445658
RCV005600897
RCV006252513
RCV005602045
RCV004801349
RCV004999944
RCV004999965
RCV005602080
RCV006252426
RCV005600902
RCV006252451
RCV006252454
RCV005252937
RCV006447386
RCV003330808
RCV002509453
RCV006252456
RCV003117359
RCV005252975
RCV006252457
RCV005601041
RCV002271535
RCV005252982
RCV005601042
RCV004689806
RCV005252991
RCV005864522
RCV005864521
RCV004586866
RCV006448564
RCV006448561
RCV006252459
RCV004689834
RCV006252460
RCV005240445
RCV005253093
RCV003987685
RCV005601090
RCV005601604
RCV004997360
RCV005601610
RCV005253143
RCV005253649
RCV004782569
RCV005601641
RCV004997570
RCV005864540
RCV006252476
RCV006252477
RCV005633935
RCV004998721
RCV006249722
RCV003226456
RCV003399036
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
- no classification for the single variant rs1553542704, rs1230790473 -
Arthralgia Uncertain significance rs1553550862 RCV000626761
Cervical cancer Conflicting classifications of pathogenicity; Likely benign; Benign rs76576806, rs145007061, rs75563048, rs79084610 RCV005888065
RCV005895592
RCV005905418
RCV005905422
Cholangiocarcinoma Benign; Likely benign rs35982795, rs369361727 RCV005886429
RCV005916193
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
AA amyloidosis Associate 20544924
Alstrom Syndrome Associate 26077327
Anemia Diamond Blackfan Associate 24454878
Anterior Compartment Syndrome Associate 19528035, 22318734, 26444858
Asthma Associate 34510493
Bronchopulmonary Dysplasia Associate 40244055
Carcinoma Hepatocellular Associate 29385134
Cone Rod Dystrophies Associate 26077327
Corneal Dystrophies Hereditary Associate 20595382, 21412170, 28904177
Crohn Disease Associate 31956234