Gene Gene information from NCBI Gene database.
Entrez ID 8216
Gene name Leucine zipper like post translational regulator 1
Gene symbol LZTR1
Synonyms (NCBI Gene)
BTBD29LZTR-1NS10NS2SWNTS2
Chromosome 22
Chromosome location 22q11.21|22q11.1-q11.2
Summary This gene encodes a member of the BTB-kelch superfamily. Initially described as a putative transcriptional regulator based on weak homology to members of the basic leucine zipper-like family, the encoded protein subsequently has been shown to localize exc
SNPs SNP information provided by dbSNP.
58
SNP ID Visualize variation Clinical significance Consequence
rs140874089 G>A,C Conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs145594158 G>A Likely-pathogenic Splice donor variant
rs148677674 C>A,T Likely-pathogenic Coding sequence variant, missense variant
rs149850248 C>G,T Likely-pathogenic Coding sequence variant, stop gained, missense variant
rs150419186 C>A,G,T Pathogenic Coding sequence variant, synonymous variant, stop gained, missense variant
miRNA miRNA information provided by mirtarbase database.
143
miRTarBase ID miRNA Experiments Reference
MIRT046517 hsa-miR-15b-5p CLASH 23622248
MIRT046517 hsa-miR-15b-5p CLASH 23622248
MIRT037967 hsa-miR-505-5p CLASH 23622248
MIRT650834 hsa-miR-6736-3p HITS-CLIP 23824327
MIRT650833 hsa-miR-4267 HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
16
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 19060904, 29892012, 32296183, 35512704
GO:0005768 Component Endosome IEA
GO:0005794 Component Golgi apparatus IBA
GO:0005794 Component Golgi apparatus IDA 16356934
GO:0005794 Component Golgi apparatus IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
600574 6742 ENSG00000099949
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q8N653
Protein name Leucine-zipper-like transcriptional regulator 1 (LZTR-1)
Protein function Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex that mediates ubiquitination of Ras (K-Ras/KRAS, N-Ras/NRAS and H-Ras/HRAS) (PubMed:30442762, PubMed:30442766, PubMed:30481304). Is a negative regulator of R
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13418 Kelch_4 67 116 Repeat
PF07646 Kelch_2 117 166 Kelch motif Repeat
PF01344 Kelch_1 227 270 Kelch motif Repeat
PF01344 Kelch_1 283 328 Kelch motif Repeat
PF00651 BTB 433 573 BTB/POZ domain Domain
PF00651 BTB 656 767 BTB/POZ domain Domain
Sequence
MAGPGSTGGQIGAAALAGGARSKVAPSVDFDHSCSDSVEYLTLNFGPFETVHRWRRLPPC
DEFVGARRSKHTVVAYKDAIYVFGGDNGKTMLNDLLRFDVKDCSWCRAFTTGTPPAPRYH
HSAVVYGSSMFVFGGYTGDIYSNSNLKNKNDLFEYKFATGQWTEWK
IEGRLPVARSAHGA
TVYSDKLWIFAGYDGNARLNDMWTIGLQDRELTCWEEVAQSGEIPPSCCNFPVAVCRDKM
FVFSGQSGAKITNNLFQFEFKDKTWTRIPT
EHLLRGSPPPPQRRYGHTMVAFDRHLYVFG
GAADNTLPNELHCYDVDFQTWEVVQPSS
DSEVGGAEVPERACASEEVPTLTYEERVGFKK
SRDVFGLDFGTTSAKQPTQPASELPSGRLFHAAAVISDAMYIFGGTVDNNIRSGEMYRFQ
FSCYPKCTLHEDYGRLWESRQFCDVEFVLGEKEECVQGHVAIVTARSRWLRRKITQARER
LAQKLEQEAAPVPREAPGVAAGGARPPLLHVAIREAEARPFEVLMQFLYTDKIKYPRKGH
VEDVLLIMDVYKLALSFQLCRLEQLCRQYIEAS
VDLQNVLVVCESAARLQLSQLKEHCLN
FVVKESHFNQVIMMKEFERLSSPLIVEIVRRKQQPPPRTPLDQPVDIGTSLIQDMKAYLE
GAGAEFCDITLLLDGHPRPAHKAILAARSSYFEAMFRSFMPEDGQVNISIGEMVPSRQAF
ESMLRYIYYGEVNMPPEDSLYLFAAPYYYGFYNNRLQAYCKQNLEMN
VTVQNVLQILEAA
DKTQALDMKRHCLHIIVHQFTKVSKLPTLRSLSQQLLLDIIDSLASHISDKQCAELGADI
Sequence length 840
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
6228
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Autism spectrum disorder Likely pathogenic; Pathogenic rs780267761 RCV001291506
Cardiovascular phenotype Pathogenic; Likely pathogenic rs751123751, rs774779041, rs1924832357, rs1231204217, rs761241914, rs1450044732, rs1381717741, rs766446110, rs1924258572, rs587777177, rs1924497235, rs767445373, rs990151749, rs1390034681, rs2147969560
View all (304 more)
RCV005652613
RCV002322266
RCV004561084
RCV003164733
RCV002432059
RCV002368216
RCV005660134
RCV002413912
RCV004557584
RCV002456601
RCV004995728
RCV002377574
RCV004995734
RCV002404902
RCV002420867
RCV002426650
RCV002444559
RCV002390252
RCV002405205
RCV002458515
RCV004995942
RCV002421199
RCV002368595
RCV002386508
RCV002425044
RCV005660165
RCV002386552
RCV002414338
RCV002334691
RCV002414343
RCV002425072
RCV004996006
RCV005652706
RCV002386563
RCV002324209
RCV002324215
RCV002422878
RCV002361096
RCV004558814
RCV002344018
RCV005660262
RCV004996069
RCV004996137
RCV002407299
RCV004558684
RCV004558774
RCV002425326
RCV005660338
RCV003167262
RCV004996153
RCV005654902
RCV004558759
RCV002334969
RCV005585029
RCV002370648
RCV002397812
RCV002397931
RCV003161293
RCV002331528
RCV004558761
RCV004558762
RCV002398048
RCV002398011
RCV002352654
RCV004558763
RCV002352656
RCV004990504
RCV002334922
RCV002433625
RCV006357385
RCV003164433
RCV005574927
RCV002445432
RCV002324612
RCV002328204
RCV002322977
RCV002452700
RCV002320803
RCV002357815
RCV002324968
RCV002338568
RCV002347615
RCV002358180
RCV002358226
RCV002335932
RCV002355930
RCV002366557
RCV002364221
RCV002364243
RCV002364245
RCV002361888
RCV002343067
RCV002349904
RCV002351590
RCV002359983
RCV002360217
RCV002364512
RCV002362517
RCV002416692
RCV002416741
RCV002416742
RCV002416857
RCV002430372
RCV002434673
RCV002369642
RCV002377983
RCV002393822
RCV002412281
RCV002378702
RCV002385364
RCV002369354
RCV002385106
RCV002449932
RCV002449964
RCV002374049
RCV002380297
RCV002376129
RCV002380556
RCV002387983
RCV002387984
RCV002383490
RCV002391939
RCV002391943
RCV002398611
RCV002405885
RCV002387327
RCV002387365
RCV002382831
RCV002382865
RCV002382902
RCV002382903
RCV002389384
RCV002389709
RCV002403646
RCV002403686
RCV002399127
RCV002399216
RCV002410093
RCV002385487
RCV002394709
RCV002394759
RCV002396764
RCV002401045
RCV002406253
RCV002404145
RCV002407720
RCV002415155
RCV002394500
RCV002394501
RCV002394502
RCV002394839
RCV002400916
RCV002400959
RCV002400971
RCV002400972
RCV002400973
RCV002400974
RCV002406153
RCV002414966
RCV002412870
RCV002423625
RCV002422078
RCV002422128
RCV002422174
RCV002432837
RCV002432841
RCV002443841
RCV002450279
RCV002428637
RCV002408110
RCV002408136
RCV002408253
RCV002408404
RCV002432437
RCV002432453
RCV002428324
RCV002443635
RCV002448481
RCV002410904
RCV002417355
RCV002417374
RCV002425931
RCV002428104
RCV002448135
RCV002457593
RCV002428525
RCV002417092
RCV002417164
RCV002417165
RCV002417176
RCV002424278
RCV002425488
RCV002425570
RCV002428479
RCV002446367
RCV005370219
RCV005654999
RCV003164738
RCV004560036
RCV004560030
RCV004560029
RCV004992514
RCV004560047
RCV006342802
RCV004560056
RCV004560053
RCV005495490
RCV005363070
RCV003162109
RCV004990860
RCV003167787
RCV002381647
RCV002444774
RCV005662510
RCV003167900
RCV004559992
RCV003170797
RCV004990985
RCV004992577
RCV003183923
RCV003176582
RCV003176586
RCV003167992
RCV003167998
RCV003168002
RCV003168004
RCV003168007
RCV003168009
RCV003168010
RCV003168011
RCV003168014
RCV003173263
RCV003216358
RCV003216362
RCV003216363
RCV003216371
RCV003216373
RCV003216375
RCV003216381
RCV005363088
RCV005662631
RCV002429235
RCV006342963
RCV005662645
RCV004560176
RCV006342981
RCV005439133
RCV004992610
RCV004992611
RCV004560181
RCV004560182
RCV005537595
RCV004558148
RCV005377413
RCV006343049
RCV004558164
RCV005495605
RCV004558204
RCV004558977
RCV004558210
RCV004558208
RCV004558211
RCV004558979
RCV004992774
RCV004992785
RCV005445972
RCV005537713
RCV006347917
RCV004992909
RCV004559039
RCV004559040
RCV005662763
RCV005662786
RCV004560878
RCV004560894
RCV004560900
RCV004560910
RCV004560916
RCV004560939
RCV004560942
RCV004560945
RCV004560956
RCV004560957
RCV004560960
RCV004560968
RCV004560997
RCV004561004
RCV004561020
RCV004561023
RCV004561044
RCV004561045
RCV004561046
RCV004561049
RCV004561060
RCV004561063
RCV004561083
RCV004561085
RCV004561107
RCV004561116
RCV004561117
RCV004561144
RCV004561147
RCV004561153
RCV004561154
RCV004561157
RCV004561167
RCV004561174
RCV004561183
RCV004561188
RCV004561189
RCV004561194
RCV004561195
RCV004561206
RCV004561208
RCV004561211
RCV004561214
RCV004561238
RCV004561242
RCV004561244
RCV004561246
RCV004561250
RCV004994438
RCV004559048
RCV002436233
RCV002411278
RCV002341137
RCV002455940
RCV005367351
RCV004992300
RCV006342333
RCV002456013
RCV002404345
RCV002358639
RCV005372366
RCV004559255
RCV002413779
RCV003162767
RCV005492851
RCV002406499
RCV002386139
RCV004559339
RCV002360709
RCV002442408
RCV004993935
RCV002360863
RCV005540163
RCV005372430
RCV004559707
RCV002391061
RCV002337086
RCV002429739
RCV002445273
RCV002418577
RCV005372574
RCV002356868
RCV002402575
RCV003163777
RCV002379954
RCV002375333
Developmental disorder Likely pathogenic; Pathogenic rs587777176 RCV003126498
Emery-Dreifuss muscular dystrophy Pathogenic rs2147962064 RCV004527095
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Acute myeloid leukemia Conflicting classifications of pathogenicity; Benign; Likely benign rs368158143, rs35767542 RCV005925644
RCV005900024
Bladder exstrophy Uncertain significance; Likely benign rs760064852, rs751444145 RCV000735828
RCV000735829
Cardiomyopathy Conflicting classifications of pathogenicity rs759568976 RCV006255214
Cervical cancer Uncertain significance rs770882185 RCV005934763
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Adenocarcinoma Associate 36304963
Adrenocortical Carcinoma Associate 36304963
Astrocytoma Associate 30664951
Autistic Disorder Associate 25961944
Bladder Exstrophy Associate 34355505, 36349425, 37509153
Bladder Exstrophy and Epispadias Complex Associate 37509153
Breast Neoplasms Associate 40724954
Carcinogenesis Associate 36304963, 37626065
Carcinoma Hepatocellular Associate 28622513, 36304963
Cardiomyopathy Dilated Associate 39577308