Gene Gene information from NCBI Gene database.
Entrez ID 80335
Gene name WD repeat domain 82
Gene symbol WDR82
Synonyms (NCBI Gene)
MST107MSTP107PRO2730PRO34047SWD2TMEM113WDR82A
Chromosome 3
Chromosome location 3p21.2
Summary TMEM113 (WDR82) is a component of the mammalian SET1A (MIM 611052)/SET1B (MIM 611055) histone H3-Lys4 methyltransferase complexes (Lee and Skalnik, 2005 [PubMed 16253997]; Lee et al., 2007 [PubMed 17355966]).[supplied by OMIM, Jul 2010]
miRNA miRNA information provided by mirtarbase database.
1294
miRTarBase ID miRNA Experiments Reference
MIRT005216 hsa-miR-30a-5p pSILAC 18668040
MIRT028388 hsa-miR-30a-3p qRT-PCR 16239240
MIRT005216 hsa-miR-30a-5p Proteomics;Other 18668040
MIRT050892 hsa-miR-17-5p CLASH 23622248
MIRT040688 hsa-miR-92b-3p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
28
GO ID Ontology Definition Evidence Reference
GO:0000781 Component Chromosome, telomeric region IDA 24270157
GO:0000785 Component Chromatin IDA 20516061
GO:0001111 Process RNA polymerase II promoter clearance IDA 39603239, 39603240
GO:0003682 Function Chromatin binding IBA
GO:0003682 Function Chromatin binding IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
611059 28826 ENSG00000164091
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q6UXN9
Protein name WD repeat-containing protein 82
Protein function Regulatory component of the SET1/COMPASS complex implicated in the tethering of this complex to transcriptional start sites of active genes (PubMed:17998332, PubMed:18838538, PubMed:20516061). Facilitates histone H3 'Lys-4' methylation (H3K4me)
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00400 WD40 9 49 WD domain, G-beta repeat Repeat
PF00400 WD40 97 135 WD domain, G-beta repeat Repeat
PF00400 WD40 226 267 WD domain, G-beta repeat Repeat
Sequence
MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDD
TFISGSLDKTIRLWD
LRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKA
VTLEASFTPDSQFIMIGSEDGKIHVWN
GESGIKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
Sequence length 313
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG 
  mRNA surveillance pathway