Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	79838
Gene name Gene Name - the full gene name approved by the HGNC.	Transmembrane channel like 5
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	TMC5
Synonyms (NCBI Gene) Gene synonyms aliases	-
Chromosome Chromosome number	16
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	16p12.3

Show/Hide all(205)

miRTarBase ID	miRNA	Experiments	Reference
MIRT569131	hsa-miR-892c-5p	HITS-CLIP	21572407
MIRT569130	hsa-miR-506-5p	HITS-CLIP	21572407
MIRT242384	hsa-miR-3613-3p	HITS-CLIP	21572407
MIRT569129	hsa-miR-622	HITS-CLIP	21572407
MIRT569128	hsa-miR-4738-5p	HITS-CLIP	21572407
MIRT569127	hsa-miR-3605-3p	HITS-CLIP	21572407
MIRT706717	hsa-miR-3920	HITS-CLIP	21572407
MIRT242383	hsa-miR-873-3p	HITS-CLIP	21572407
MIRT569126	hsa-miR-3194-5p	HITS-CLIP	21572407
MIRT242387	hsa-miR-6832-5p	HITS-CLIP	21572407
MIRT569125	hsa-miR-1202	HITS-CLIP	21572407
MIRT569124	hsa-miR-3972	HITS-CLIP	21572407
MIRT569123	hsa-miR-5006-5p	HITS-CLIP	21572407
MIRT569131	hsa-miR-892c-5p	PAR-CLIP	20371350
MIRT569130	hsa-miR-506-5p	PAR-CLIP	20371350
MIRT242384	hsa-miR-3613-3p	PAR-CLIP	20371350
MIRT569129	hsa-miR-622	PAR-CLIP	20371350
MIRT569128	hsa-miR-4738-5p	PAR-CLIP	20371350
MIRT569127	hsa-miR-3605-3p	PAR-CLIP	20371350
MIRT242383	hsa-miR-873-3p	PAR-CLIP	20371350
MIRT569126	hsa-miR-3194-5p	PAR-CLIP	20371350
MIRT242387	hsa-miR-6832-5p	PAR-CLIP	20371350
MIRT569125	hsa-miR-1202	PAR-CLIP	20371350
MIRT569124	hsa-miR-3972	PAR-CLIP	20371350
MIRT569123	hsa-miR-5006-5p	PAR-CLIP	20371350
MIRT242382	hsa-miR-548c-3p	PAR-CLIP	22100165
MIRT445316	hsa-miR-6771-3p	PAR-CLIP	22100165
MIRT445315	hsa-miR-4635	PAR-CLIP	22100165
MIRT445314	hsa-miR-431-5p	PAR-CLIP	22100165
MIRT445313	hsa-miR-511-5p	PAR-CLIP	22100165
MIRT569131	hsa-miR-892c-5p	HITS-CLIP	21572407
MIRT569130	hsa-miR-506-5p	HITS-CLIP	21572407
MIRT242384	hsa-miR-3613-3p	HITS-CLIP	21572407
MIRT569129	hsa-miR-622	HITS-CLIP	21572407
MIRT569128	hsa-miR-4738-5p	HITS-CLIP	21572407
MIRT569127	hsa-miR-3605-3p	HITS-CLIP	21572407
MIRT706717	hsa-miR-3920	HITS-CLIP	21572407
MIRT242383	hsa-miR-873-3p	HITS-CLIP	21572407
MIRT569126	hsa-miR-3194-5p	HITS-CLIP	21572407
MIRT242387	hsa-miR-6832-5p	HITS-CLIP	21572407
MIRT569125	hsa-miR-1202	HITS-CLIP	21572407
MIRT569124	hsa-miR-3972	HITS-CLIP	21572407
MIRT569123	hsa-miR-5006-5p	HITS-CLIP	21572407
MIRT569131	hsa-miR-892c-5p	PAR-CLIP	20371350
MIRT569130	hsa-miR-506-5p	PAR-CLIP	20371350
MIRT242384	hsa-miR-3613-3p	PAR-CLIP	20371350
MIRT569129	hsa-miR-622	PAR-CLIP	20371350
MIRT569128	hsa-miR-4738-5p	PAR-CLIP	20371350
MIRT569127	hsa-miR-3605-3p	PAR-CLIP	20371350
MIRT242383	hsa-miR-873-3p	PAR-CLIP	20371350
MIRT569126	hsa-miR-3194-5p	PAR-CLIP	20371350
MIRT242387	hsa-miR-6832-5p	PAR-CLIP	20371350
MIRT569125	hsa-miR-1202	PAR-CLIP	20371350
MIRT569124	hsa-miR-3972	PAR-CLIP	20371350
MIRT569123	hsa-miR-5006-5p	PAR-CLIP	20371350
MIRT242382	hsa-miR-548c-3p	PAR-CLIP	22100165
MIRT445316	hsa-miR-6771-3p	PAR-CLIP	22100165
MIRT445315	hsa-miR-4635	PAR-CLIP	22100165
MIRT445314	hsa-miR-431-5p	PAR-CLIP	22100165
MIRT445313	hsa-miR-511-5p	PAR-CLIP	22100165
MIRT1428024	hsa-miR-1208	CLIP-seq
MIRT1428025	hsa-miR-1281	CLIP-seq
MIRT1428026	hsa-miR-129-5p	CLIP-seq
MIRT1428027	hsa-miR-1304	CLIP-seq
MIRT1428028	hsa-miR-1827	CLIP-seq
MIRT1428029	hsa-miR-1915	CLIP-seq
MIRT1428030	hsa-miR-1976	CLIP-seq
MIRT1428031	hsa-miR-216a	CLIP-seq
MIRT1428032	hsa-miR-3153	CLIP-seq
MIRT1428033	hsa-miR-3647-3p	CLIP-seq
MIRT1428034	hsa-miR-4252	CLIP-seq
MIRT1428035	hsa-miR-4279	CLIP-seq
MIRT1428036	hsa-miR-4282	CLIP-seq
MIRT1428037	hsa-miR-4668-5p	CLIP-seq
MIRT1428038	hsa-miR-4722-3p	CLIP-seq
MIRT1428039	hsa-miR-4726-3p	CLIP-seq
MIRT1428040	hsa-miR-4740-3p	CLIP-seq
MIRT1428041	hsa-miR-4772-3p	CLIP-seq
MIRT1428042	hsa-miR-498	CLIP-seq
MIRT1428043	hsa-miR-513a-3p	CLIP-seq
MIRT1428029	hsa-miR-1915	CLIP-seq
MIRT1428030	hsa-miR-1976	CLIP-seq
MIRT1428044	hsa-miR-3908	CLIP-seq
MIRT1428045	hsa-miR-3917	CLIP-seq
MIRT1428046	hsa-miR-3942-5p	CLIP-seq
MIRT1428035	hsa-miR-4279	CLIP-seq
MIRT1428047	hsa-miR-4703-5p	CLIP-seq
MIRT1428038	hsa-miR-4722-3p	CLIP-seq
MIRT1428039	hsa-miR-4726-3p	CLIP-seq
MIRT1428040	hsa-miR-4740-3p	CLIP-seq
MIRT1428048	hsa-miR-4766-3p	CLIP-seq
MIRT1428041	hsa-miR-4772-3p	CLIP-seq
MIRT1428042	hsa-miR-498	CLIP-seq
MIRT1428031	hsa-miR-216a	CLIP-seq
MIRT1428044	hsa-miR-3908	CLIP-seq
MIRT1428045	hsa-miR-3917	CLIP-seq
MIRT1428046	hsa-miR-3942-5p	CLIP-seq
MIRT1428036	hsa-miR-4282	CLIP-seq
MIRT1428047	hsa-miR-4703-5p	CLIP-seq
MIRT1428048	hsa-miR-4766-3p	CLIP-seq
MIRT1428043	hsa-miR-513a-3p	CLIP-seq
MIRT1428031	hsa-miR-216a	CLIP-seq
MIRT1428044	hsa-miR-3908	CLIP-seq
MIRT1428045	hsa-miR-3917	CLIP-seq
MIRT1428046	hsa-miR-3942-5p	CLIP-seq
MIRT1428047	hsa-miR-4703-5p	CLIP-seq
MIRT1428048	hsa-miR-4766-3p	CLIP-seq
MIRT2128186	hsa-miR-1285	CLIP-seq
MIRT2128187	hsa-miR-1290	CLIP-seq
MIRT1428029	hsa-miR-1915	CLIP-seq
MIRT2128188	hsa-miR-197	CLIP-seq
MIRT1428030	hsa-miR-1976	CLIP-seq
MIRT2128189	hsa-miR-3167	CLIP-seq
MIRT2128190	hsa-miR-3182	CLIP-seq
MIRT2128191	hsa-miR-3187-3p	CLIP-seq
MIRT2128192	hsa-miR-3187-5p	CLIP-seq
MIRT2128193	hsa-miR-3545-3p	CLIP-seq
MIRT2128194	hsa-miR-3663-5p	CLIP-seq
MIRT2128195	hsa-miR-378g	CLIP-seq
MIRT2128196	hsa-miR-411	CLIP-seq
MIRT1428035	hsa-miR-4279	CLIP-seq
MIRT2128197	hsa-miR-4314	CLIP-seq
MIRT2128198	hsa-miR-4435	CLIP-seq
MIRT2128199	hsa-miR-4486	CLIP-seq
MIRT2128200	hsa-miR-4659a-3p	CLIP-seq
MIRT2128201	hsa-miR-4659b-3p	CLIP-seq
MIRT2128202	hsa-miR-4680-5p	CLIP-seq
MIRT2128203	hsa-miR-4701-5p	CLIP-seq
MIRT2128204	hsa-miR-4716-5p	CLIP-seq
MIRT1428038	hsa-miR-4722-3p	CLIP-seq
MIRT1428039	hsa-miR-4726-3p	CLIP-seq
MIRT1428040	hsa-miR-4740-3p	CLIP-seq
MIRT2128205	hsa-miR-4755-3p	CLIP-seq
MIRT1428041	hsa-miR-4772-3p	CLIP-seq
MIRT2128206	hsa-miR-4781-3p	CLIP-seq
MIRT2128207	hsa-miR-483-5p	CLIP-seq
MIRT1428042	hsa-miR-498	CLIP-seq
MIRT2128208	hsa-miR-5096	CLIP-seq
MIRT2128209	hsa-miR-548s	CLIP-seq
MIRT2128210	hsa-miR-588	CLIP-seq
MIRT2128211	hsa-miR-612	CLIP-seq
MIRT2128212	hsa-miR-876-5p	CLIP-seq
MIRT2349878	hsa-miR-4432	CLIP-seq
MIRT2349879	hsa-miR-1	CLIP-seq
MIRT1428029	hsa-miR-1915	CLIP-seq
MIRT1428030	hsa-miR-1976	CLIP-seq
MIRT2349880	hsa-miR-206	CLIP-seq
MIRT1428031	hsa-miR-216a	CLIP-seq
MIRT1428033	hsa-miR-3647-3p	CLIP-seq
MIRT2349881	hsa-miR-3652	CLIP-seq
MIRT2349882	hsa-miR-3673	CLIP-seq
MIRT1428044	hsa-miR-3908	CLIP-seq
MIRT1428045	hsa-miR-3917	CLIP-seq
MIRT1428046	hsa-miR-3942-5p	CLIP-seq
MIRT1428034	hsa-miR-4252	CLIP-seq
MIRT1428035	hsa-miR-4279	CLIP-seq
MIRT1428036	hsa-miR-4282	CLIP-seq
MIRT2349883	hsa-miR-4423-5p	CLIP-seq
MIRT2349884	hsa-miR-4430	CLIP-seq
MIRT1428047	hsa-miR-4703-5p	CLIP-seq
MIRT1428038	hsa-miR-4722-3p	CLIP-seq
MIRT1428039	hsa-miR-4726-3p	CLIP-seq
MIRT1428040	hsa-miR-4740-3p	CLIP-seq
MIRT1428048	hsa-miR-4766-3p	CLIP-seq
MIRT1428042	hsa-miR-498	CLIP-seq
MIRT1428043	hsa-miR-513a-3p	CLIP-seq
MIRT2349885	hsa-miR-613	CLIP-seq
MIRT2395890	hsa-miR-143	CLIP-seq
MIRT1428029	hsa-miR-1915	CLIP-seq
MIRT1428030	hsa-miR-1976	CLIP-seq
MIRT1428044	hsa-miR-3908	CLIP-seq
MIRT1428045	hsa-miR-3917	CLIP-seq
MIRT2395891	hsa-miR-3919	CLIP-seq
MIRT1428046	hsa-miR-3942-5p	CLIP-seq
MIRT1428034	hsa-miR-4252	CLIP-seq
MIRT1428035	hsa-miR-4279	CLIP-seq
MIRT1428047	hsa-miR-4703-5p	CLIP-seq
MIRT1428038	hsa-miR-4722-3p	CLIP-seq
MIRT1428039	hsa-miR-4726-3p	CLIP-seq
MIRT1428040	hsa-miR-4740-3p	CLIP-seq
MIRT2395892	hsa-miR-4756-3p	CLIP-seq
MIRT1428048	hsa-miR-4766-3p	CLIP-seq
MIRT2395893	hsa-miR-4770	CLIP-seq
MIRT1428042	hsa-miR-498	CLIP-seq
MIRT1428029	hsa-miR-1915	CLIP-seq
MIRT1428030	hsa-miR-1976	CLIP-seq
MIRT1428035	hsa-miR-4279	CLIP-seq
MIRT1428038	hsa-miR-4722-3p	CLIP-seq
MIRT1428039	hsa-miR-4726-3p	CLIP-seq
MIRT1428040	hsa-miR-4740-3p	CLIP-seq
MIRT1428042	hsa-miR-498	CLIP-seq
MIRT1428029	hsa-miR-1915	CLIP-seq
MIRT1428030	hsa-miR-1976	CLIP-seq
MIRT1428035	hsa-miR-4279	CLIP-seq
MIRT1428038	hsa-miR-4722-3p	CLIP-seq
MIRT1428039	hsa-miR-4726-3p	CLIP-seq
MIRT1428040	hsa-miR-4740-3p	CLIP-seq
MIRT1428042	hsa-miR-498	CLIP-seq
MIRT1428029	hsa-miR-1915	CLIP-seq
MIRT1428030	hsa-miR-1976	CLIP-seq
MIRT1428035	hsa-miR-4279	CLIP-seq
MIRT1428038	hsa-miR-4722-3p	CLIP-seq
MIRT1428039	hsa-miR-4726-3p	CLIP-seq
MIRT1428040	hsa-miR-4740-3p	CLIP-seq
MIRT1428042	hsa-miR-498	CLIP-seq

Show/Hide all(4)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005887	Component	Integral component of plasma membrane	IEA
GO:0008381	Function	Mechanosensitive ion channel activity	IBA	21873635
GO:0034220	Process	Ion transmembrane transport	IEA
GO:0070062	Component	Extracellular exosome	HDA	23533145

MIM	HGNC	e!Ensembl
617197	22999	ENSG00000103534

Protein

UniProt ID

Q6UXY8

Protein name

Transmembrane channel-like protein 5

Protein function

Probable component of an ion channel (Probable). Molecular function hasn't been characterized yet (Probable).

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF07810	TMC	724 → 830	TMC domain	Domain

Sequence

MSAYYRNNWSEEDPDYPDYSGSQNRTQGYLKTQGYPDVPGPLNNPDYPGTRSNPYSVASR
TRPDYPGSLAEPNYPRSLSNPDYSGTRSNAYSAASRTSPDHPTSLPEPDYSEFQSHPYHR
ASSRQPDYPGSQRNPDFAGSSSSGNYAGSRTHPDHFGSLEPDYPGAQSNSDHPGPRANLN
HPGSRKNLEHTSFRINPYADSLGKPDYPGADIQPNSPPFFGEPDYPSAEDNQNLPSTWRE
PDYSDAENGHDYGSSETPKMTRGVLSRTSSIQPSFRHRSDDPVGSLWGENDYPEGIEMAS
MEMANSYGHSLPGAPGSGYVNPAYVGESGPVHAYGNPPLSECDWHKSPQGQKLIASLIPM
TSRDRIKAIRNQPRTMEEKRNLRKIVDKEKSKQTHRILQLNCCIQCLNSISRAYRRSKNS
LSEILNSISLWQKTLKIIGGKFGTSVLSYFNFLRWLLKFNIFSFILNFSFIIIPQFTVAK
KNTLQFTGLEFFTGVGYFRDTVMYYGFYTNSTIQHGNSGASYNMQLAYIFTIGACLTTCF
FSLLFSMAKYFRNNFINPHIYSGGITKLIFCWDFTVTHEKAVKLKQKNLSTEIRENLSEL
RQENSKLTFNQLLTRFSAYMVAWVVSTGVAIACCAAVYYLAEYNLEFLKTHSNPGAVLLL
PFVVSCINLAVPCIYSMFRLVERYEMPRHEVYVLLIRNIFLKISIIGILCYYWLNTVALS
GEECWETLIGQDIYRLLLMDFVFSLVNSFLGEFLRRIIGMQLITSLGLQEFDIARNVLEL
IYAQTLVWIGIFFCPLLPFIQMIMLFIMFYSKNISLMMNFQPPSKAWRASQMMTFFIFLL
FFPSFTGVLCTLAITIWRLKPSADCGPFRGLPLFIHSIYSWIDTLSTRPGYLWVVWIYRN
LIGSVHFFFILTLIVLIITYLYWQITEGRKIMIRLLHEQIINEGKDKMFLIEKLIKLQDM
EKKANPSSLVLERREVEQQGFLHLGEHDGSLDLRSRRSVQEGNPRA

Sequence length

1006

Interactions

View interactions

Show/Hide Causal Diseases (1)

Disease term	Disease name	dbSNP ID	References
Causal
Alzheimer disease	Alzheimer`s Disease	rs63750215, rs28936379, rs63749851, rs63749884, rs28936380, rs63750048, rs63750579, rs63750264, rs63749964, rs63750671, rs281865161, rs63750066, rs63750399, rs63750734, rs63751039 View all (65 more)	26830138

Show/Hide Text Mining Associations (5)

Disease Name	Relationship Type	References
Associations from Text Mining
Breast Neoplasms	Associate	34899684
Carcinoma Hepatocellular	Associate	32148377, 40302342
Carcinoma Renal Cell	Associate	37468683
Melanoma	Associate	34899684
Neoplasms	Associate	40302342

TMC5 (transmembrane channel like 5)