Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID	79780
Gene name	Coiled-coil domain containing 82
Gene symbol	CCDC82
Synonyms (NCBI Gene)	HSPC048
Chromosome	11
Chromosome location	11q21

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miRTarBase ID	miRNA	Experiments	Reference
MIRT020779	hsa-miR-155-5p	Reporter assay;Other	20584899
MIRT020779	hsa-miR-155-5p	HITS-CLIP	22473208
MIRT020779	hsa-miR-155-5p	HITS-CLIP	22473208
MIRT869880	hsa-miR-3163	CLIP-seq
MIRT869881	hsa-miR-3647-3p	CLIP-seq
MIRT869882	hsa-miR-4282	CLIP-seq
MIRT869883	hsa-miR-4422	CLIP-seq
MIRT869884	hsa-miR-4432	CLIP-seq
MIRT869885	hsa-miR-488	CLIP-seq
MIRT869886	hsa-miR-518d-5p	CLIP-seq
MIRT869887	hsa-miR-519b-5p	CLIP-seq
MIRT869888	hsa-miR-519c-5p	CLIP-seq
MIRT869889	hsa-miR-520c-5p	CLIP-seq
MIRT869890	hsa-miR-526a	CLIP-seq
MIRT869891	hsa-miR-548u	CLIP-seq
MIRT2195067	hsa-miR-3614-5p	CLIP-seq
MIRT2436126	hsa-miR-27a	CLIP-seq
MIRT2436127	hsa-miR-27b	CLIP-seq
MIRT2195067	hsa-miR-3614-5p	CLIP-seq
MIRT2436128	hsa-miR-421	CLIP-seq
MIRT2436129	hsa-miR-4252	CLIP-seq
MIRT2436130	hsa-miR-4645-3p	CLIP-seq
MIRT2436131	hsa-miR-4662a-3p	CLIP-seq
MIRT2436132	hsa-miR-4709-5p	CLIP-seq
MIRT2436133	hsa-miR-513a-5p	CLIP-seq
MIRT2498370	hsa-miR-1246	CLIP-seq
MIRT2498371	hsa-miR-1261	CLIP-seq
MIRT2498372	hsa-miR-142-5p	CLIP-seq
MIRT2498373	hsa-miR-23a	CLIP-seq
MIRT2498374	hsa-miR-23b	CLIP-seq
MIRT2498375	hsa-miR-23c	CLIP-seq
MIRT2436126	hsa-miR-27a	CLIP-seq
MIRT2436127	hsa-miR-27b	CLIP-seq
MIRT2498376	hsa-miR-3136-3p	CLIP-seq
MIRT2498377	hsa-miR-3148	CLIP-seq
MIRT869880	hsa-miR-3163	CLIP-seq
MIRT2498378	hsa-miR-340	CLIP-seq
MIRT2195067	hsa-miR-3614-5p	CLIP-seq
MIRT2498379	hsa-miR-3662	CLIP-seq
MIRT2498380	hsa-miR-3688-3p	CLIP-seq
MIRT2498381	hsa-miR-410	CLIP-seq
MIRT2498382	hsa-miR-412	CLIP-seq
MIRT2436128	hsa-miR-421	CLIP-seq
MIRT2436129	hsa-miR-4252	CLIP-seq
MIRT2498383	hsa-miR-4307	CLIP-seq
MIRT2498384	hsa-miR-433	CLIP-seq
MIRT2436130	hsa-miR-4645-3p	CLIP-seq
MIRT2498385	hsa-miR-4659a-3p	CLIP-seq
MIRT2498386	hsa-miR-4659a-5p	CLIP-seq
MIRT2498387	hsa-miR-4659b-3p	CLIP-seq
MIRT2498388	hsa-miR-4659b-5p	CLIP-seq
MIRT2436131	hsa-miR-4662a-3p	CLIP-seq
MIRT2498389	hsa-miR-4699-3p	CLIP-seq
MIRT2498390	hsa-miR-4699-5p	CLIP-seq
MIRT2498391	hsa-miR-4700-3p	CLIP-seq
MIRT2436132	hsa-miR-4709-5p	CLIP-seq
MIRT2498392	hsa-miR-4717-3p	CLIP-seq
MIRT2498393	hsa-miR-4725-5p	CLIP-seq
MIRT2498394	hsa-miR-4776-3p	CLIP-seq
MIRT2498395	hsa-miR-4795-3p	CLIP-seq
MIRT2498396	hsa-miR-504	CLIP-seq
MIRT2498397	hsa-miR-5095	CLIP-seq
MIRT2436133	hsa-miR-513a-5p	CLIP-seq
MIRT2498398	hsa-miR-548c-3p	CLIP-seq
MIRT2498399	hsa-miR-577	CLIP-seq
MIRT2498372	hsa-miR-142-5p	CLIP-seq
MIRT2498373	hsa-miR-23a	CLIP-seq
MIRT2498374	hsa-miR-23b	CLIP-seq
MIRT2498375	hsa-miR-23c	CLIP-seq
MIRT2436126	hsa-miR-27a	CLIP-seq
MIRT2436127	hsa-miR-27b	CLIP-seq
MIRT2498376	hsa-miR-3136-3p	CLIP-seq
MIRT869880	hsa-miR-3163	CLIP-seq
MIRT2498378	hsa-miR-340	CLIP-seq
MIRT2195067	hsa-miR-3614-5p	CLIP-seq
MIRT2498379	hsa-miR-3662	CLIP-seq
MIRT2498382	hsa-miR-412	CLIP-seq
MIRT2436128	hsa-miR-421	CLIP-seq
MIRT2436129	hsa-miR-4252	CLIP-seq
MIRT2498383	hsa-miR-4307	CLIP-seq
MIRT2498384	hsa-miR-433	CLIP-seq
MIRT2436130	hsa-miR-4645-3p	CLIP-seq
MIRT2498385	hsa-miR-4659a-3p	CLIP-seq
MIRT2498386	hsa-miR-4659a-5p	CLIP-seq
MIRT2498387	hsa-miR-4659b-3p	CLIP-seq
MIRT2498388	hsa-miR-4659b-5p	CLIP-seq
MIRT2436131	hsa-miR-4662a-3p	CLIP-seq
MIRT2498390	hsa-miR-4699-5p	CLIP-seq
MIRT2498391	hsa-miR-4700-3p	CLIP-seq
MIRT2436132	hsa-miR-4709-5p	CLIP-seq
MIRT2498392	hsa-miR-4717-3p	CLIP-seq
MIRT2498394	hsa-miR-4776-3p	CLIP-seq
MIRT2498395	hsa-miR-4795-3p	CLIP-seq
MIRT2498397	hsa-miR-5095	CLIP-seq
MIRT2436133	hsa-miR-513a-5p	CLIP-seq
MIRT2498399	hsa-miR-577	CLIP-seq

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GO ID	Ontology	Definition	Evidence	Reference
GO:0005634	Component	Nucleus	IBA

MIM	HGNC	e!Ensembl
619870	26282	ENSG00000149231

Q8N4S0

Protein name

Coiled-coil domain-containing protein 82

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF13846	DUF4196	98 → 152	Domain of unknown function (DUF4196)	Domain
PF13846	DUF4196	147 → 236	Domain of unknown function (DUF4196)	Domain
PF13926	DUF4211	297 → 449	Domain of unknown function (DUF4211)	Family

Sequence

MIHVRRHETRRNSKSHVPEQKSRVDWRRTKRSSISQLLDSDEELDSEEFDSDEELDSDES
FENDEELDSNKGPDCNKTPGSERELNLSKIQSEGNDSKCLINSGNGSTYEEETNKIKHRN
IDLQDQEKHLSQEDNDLNKQTGQIIEDDQEKHLSQEDNDLNKQTGQIIEDDLEEEDIKRG
KRKRLSSVMCDSDESDDSDILVRKVGVKRPRRVVEDEGSSVEMEQKTPEKTLAAQKREKL
QKLKELSKQRSRQRRSSGRDFEDSEKESCPSSDEVDEEEEEDNYESDEDGDDYIIDDFVV
QDEEGDEENKNQQGEKLTTSQLKLVKQNSLYSFSDHYTHFERVVKALLINALDESFLGTL
YDGTRQKSYAKDMLTSLHYLDNRFVQPRLESLVSRSRWKEQYKERVENYSNVSIHLKNPE
NCSCQACGLHRYCKYSVHLSGELYNTRTMQIDNFMSHDKQVFTVGRICASRTRIYHKLKH
FKFKLYQECCTIAMTEEVEDEQVKETVERIFRRSKENGWIKEKYGQLEEYLNFADYFQEE
KFEL

Sequence length

544

Interactions

View interactions

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Causal Diseases (1)

Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession	Evidence Score
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Intellectual disability	Likely pathogenic	rs1866090527	RCV002287618	★★★★★ ★★★★☆ ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)

Show/Hide Unknown Diseases (3)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Gastric cancer	Conflicting classifications of pathogenicity	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PARKINSON DISEASE	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Syndromic intellectual disability	Conflicting classifications of pathogenicity	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

CCDC82 (coiled-coil domain containing 82)