Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7942
Gene name Gene Name - the full gene name approved by the HGNC.
Transcription factor EB
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
TFEB
Synonyms (NCBI Gene) Gene synonyms aliases
ALPHATFEB, BHLHE35, TCFEB
Chromosome Chromosome number
6
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
6p21.1
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT023048 hsa-miR-124-3p Microarray 18668037
MIRT030033 hsa-miR-26b-5p Microarray 19088304
MIRT735164 hsa-miR-30b-5p Luciferase reporter assay, Western blotting, Immunoprecipitaion (IP), Mass spectrometry, Immunofluorescence, qRT-PCR, In situ hybridization 32764647
MIRT1420477 hsa-miR-3184 CLIP-seq
MIRT1420478 hsa-miR-3609 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000785 Component Chromatin ISA
GO:0000976 Function Transcription regulatory region sequence-specific DNA binding IDA 19556463
GO:0000978 Function RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA 21873635
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA 21873635
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific ISA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
600744 11753 ENSG00000112561
Protein
UniProt ID P19484
Protein name Transcription factor EB (Class E basic helix-loop-helix protein 35) (bHLHe35)
Protein function Transcription factor that acts as a master regulator of lysosomal biogenesis, autophagy, lysosomal exocytosis, lipid catabolism, energy metabolism and immune response (PubMed:21617040, PubMed:22343943, PubMed:22576015, PubMed:22692423, PubMed:25
PDB 7UX2 , 7UXC , 7UXH , 7Y62
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF15951 MITF_TFEB_C_3_N 4 162 MITF/TFEB/TFEC/TFE3 N-terminus Family
PF00010 HLH 236 289 Helix-loop-helix DNA-binding domain Domain
PF11851 DUF3371 321 473 Domain of unknown function (DUF3371) Family
Sequence
Sequence length 476
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  
  Calcium signaling pathway
Mitophagy - animal
 
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Colonic neoplasms Malignant tumor of colon rs267607789, rs774277300, rs781222233, rs1060502734, rs1060503333, rs1339238483 31089142, 26965516
Colorectal cancer Colorectal Carcinoma, Adenocarcinoma of large intestine rs137854568, rs137854573, rs137854575, rs387906234, rs121908380, rs121908702, rs267606674, rs794729661, rs121909055, rs281865417, rs267606884, rs28934575, rs587776769, rs104893815, rs587776800
View all (467 more)
31089142, 26965516
Colorectal neoplasms Colorectal Neoplasms, Malignant neoplasm of large intestine rs28929483, rs63751108, rs28929484, rs63749831, rs63750047, rs63751207, rs63749811, rs1553350126, rs63750875, rs63750955, rs587776706, rs63750871, rs587776715, rs63751466, rs63750049
View all (1682 more)
26965516, 31089142
Renal carcinoma MiT family translocation renal cell carcinoma rs121913668, rs121913670, rs121913243, rs786202724 12837690, 23426439
Unknown
Disease term Disease name Evidence References Source
Attention Deficit Hyperactivity Disorder Attention Deficit Hyperactivity Disorder GWAS
Colorectal Cancer Colorectal Cancer In summary, our data strongly demonstrated that upregulation of GRB7 conferred MEKi resistance in CRC cells with KRAS mutations by mediating RTK signaling through the recruitment of PLK1. GWAS, CBGDA
Diabetes Diabetes GWAS
Associations from Text Mining
Disease Name Relationship Type References
Adenoma Oxyphilic Associate 35980471
Alzheimer Disease Associate 27813694, 28945989, 32208437
Atherosclerosis Associate 35090378
Breast Neoplasms Associate 34663249, 35898781
Calcinosis Cutis Associate 27565001
Carcinoma Associate 33664427
Carcinoma Hepatocellular Associate 33960270
Carcinoma Renal Cell Associate 18278810, 19396149, 21602817, 22446944, 22892601, 23817689, 23826432, 24618616, 26654961, 27565001, 27864122, 28338654, 28840857, 29052596, 30206412
View all (16 more)
Cardiomyopathy Dilated Associate 36056063
Cataract Associate 34872443