GDPD3 (glycerophosphodiester phosphodiesterase domain containing 3)

Gene
Gene miRNA Gene ontology Other IDs Protein Pathways
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
79153
Gene name Gene Name - the full gene name approved by the HGNC.
Glycerophosphodiester phosphodiesterase domain containing 3
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
GDPD3
Synonyms (NCBI Gene) Gene synonyms aliases
GDE7
Chromosome Chromosome number
16
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
16p11.2
miRNA miRNA information provided by mirtarbase database.
Gene miRNA Gene ontology Other IDs Protein Pathways
Show/Hide all(1)
miRTarBase ID miRNA Experiments Reference
MIRT1016052 hsa-miR-873 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
Gene miRNA Gene ontology Other IDs Protein Pathways
Show/Hide all(13)
GO ID Ontology Definition Evidence Reference
GO:0004622 Function Lysophospholipase activity IBA 21873635
GO:0005783 Component Endoplasmic reticulum IMP 27637550
GO:0005789 Component Endoplasmic reticulum membrane IBA 21873635
GO:0005789 Component Endoplasmic reticulum membrane ISS
GO:0008081 Function Phosphoric diester hydrolase activity IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
Gene miRNA Gene ontology Other IDs Protein Pathways
MIM HGNC e!Ensembl
616318 28638 ENSG00000102886
Protein
Gene miRNA Gene ontology Other IDs Protein Pathways
UniProt ID Q7L5L3
Protein name Lysophospholipase D GDPD3 (EC 3.1.4.-) (Glycerophosphodiester phosphodiesterase 7) (Glycerophosphodiester phosphodiesterase domain-containing protein 3)
Protein function Hydrolyzes lysoglycerophospholipids to produce lysophosphatidic acid (LPA) and the corresponding amines (PubMed:27637550). Shows a preference for 1-O-alkyl-sn-glycero-3-phosphocholine (lyso-PAF), lysophosphatidylcholine (lyso-PC) and N-acylethan
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF03009 GDPD 44 → 303 Glycerophosphoryl diester phosphodiesterase family Family
Tissue specificity TISSUE SPECIFICITY: Widely expressed, with high level in kidney and ovary. {ECO:0000269|PubMed:27637550}.
Sequence
Sequence length 318
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
Gene miRNA Gene ontology Other IDs Protein Pathways
  KEGG  
  Ether lipid metabolism
Metabolic pathways