Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
79101
Gene name Gene Name - the full gene name approved by the HGNC.
TATA-box binding protein associated factor, RNA polymerase I subunit D
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
TAF1D
Synonyms (NCBI Gene) Gene synonyms aliases
JOSD3, RAFI41, TAF(I)41, TAFI41
Chromosome Chromosome number
11
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
11q21
Summary Summary of gene provided in NCBI Entrez Gene.
TAF1D is a member of the SL1 complex, which includes TBP (MIM 600075) and TAF1A (MIM 604903), TAF1B (MIM 604904), and TAF1C (MIM 604905), and plays a role in RNA polymerase I transcription (Wang et al., 2004 [PubMed 15520167]; Gorski et al., 2007 [PubMed
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT016190 hsa-miR-590-3p Sequencing 20371350
MIRT027628 hsa-miR-98-5p Microarray 19088304
MIRT036069 hsa-miR-1296-5p CLASH 23622248
MIRT682131 hsa-miR-576-3p HITS-CLIP 23706177
MIRT466683 hsa-miR-1915-3p HITS-CLIP 23706177
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0003677 Function DNA binding IEA
GO:0005515 Function Protein binding IPI 15520167, 21900206, 25416956, 32296183
GO:0005654 Component Nucleoplasm IBA 21873635
GO:0005654 Component Nucleoplasm IDA
GO:0005654 Component Nucleoplasm TAS
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
612823 28759 ENSG00000166012
Protein
UniProt ID Q9H5J8
Protein name TATA box-binding protein-associated factor RNA polymerase I subunit D (RNA polymerase I-specific TBP-associated factor 41 kDa) (TAFI41) (TATA box-binding protein-associated factor 1D) (TBP-associated factor 1D) (Transcription initiation factor SL1/TIF-IB
Protein function Component of the transcription factor SL1/TIF-IB complex, which is involved in the assembly of the PIC (preinitiation complex) during RNA polymerase I-dependent transcription. The rate of PIC formation probably is primarily dependent on the rate
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF15333 TAF1D 27 244 TATA box-binding protein-associated factor 1D Family
Sequence
Sequence length 278
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    B-WICH complex positively regulates rRNA expression
RNA Polymerase I Transcription Initiation
RNA Polymerase I Promoter Escape
RNA Polymerase I Transcription Termination