Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	79019
Gene name Gene Name - the full gene name approved by the HGNC.	Centromere protein M
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	CENPM
Synonyms (NCBI Gene) Gene synonyms aliases	C22orf18, CENP-M, PANE1
Chromosome Chromosome number	22
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	22q13.2
Summary Summary of gene provided in NCBI Entrez Gene.	The protein encoded by this gene is an inner protein of the kinetochore, the multi-protein complex that binds spindle microtubules to regulate chromosome segregation during cell division. It belongs to the constitutive centromere-associated network protei

Show/Hide all(199)

miRTarBase ID	miRNA	Experiments	Reference
MIRT044255	hsa-miR-106b-5p	CLASH	23622248
MIRT709253	hsa-miR-6072	HITS-CLIP	19536157
MIRT709251	hsa-miR-6891-3p	HITS-CLIP	19536157
MIRT709252	hsa-miR-136-5p	HITS-CLIP	19536157
MIRT709249	hsa-miR-4468	HITS-CLIP	19536157
MIRT709250	hsa-miR-4792	HITS-CLIP	19536157
MIRT709248	hsa-miR-130a-5p	HITS-CLIP	19536157
MIRT709247	hsa-miR-23a-3p	HITS-CLIP	19536157
MIRT709246	hsa-miR-23b-3p	HITS-CLIP	19536157
MIRT709245	hsa-miR-23c	HITS-CLIP	19536157
MIRT691293	hsa-miR-34b-3p	HITS-CLIP	23313552
MIRT631272	hsa-miR-216a-5p	HITS-CLIP	23313552
MIRT691292	hsa-miR-6808-5p	HITS-CLIP	23313552
MIRT691291	hsa-miR-6893-5p	HITS-CLIP	23313552
MIRT691290	hsa-miR-940	HITS-CLIP	23313552
MIRT691289	hsa-miR-3929	HITS-CLIP	23313552
MIRT691288	hsa-miR-4419b	HITS-CLIP	23313552
MIRT691287	hsa-miR-4478	HITS-CLIP	23313552
MIRT691286	hsa-miR-3614-5p	HITS-CLIP	23313552
MIRT691285	hsa-miR-6500-3p	HITS-CLIP	23313552
MIRT691284	hsa-miR-1207-3p	HITS-CLIP	23313552
MIRT691283	hsa-miR-6746-5p	HITS-CLIP	23313552
MIRT691282	hsa-miR-6787-3p	HITS-CLIP	23313552
MIRT691281	hsa-miR-4649-3p	HITS-CLIP	23313552
MIRT691280	hsa-miR-1827	HITS-CLIP	23313552
MIRT691279	hsa-miR-4722-5p	HITS-CLIP	23313552
MIRT691278	hsa-miR-423-3p	HITS-CLIP	23313552
MIRT691277	hsa-miR-7160-5p	HITS-CLIP	23313552
MIRT691276	hsa-miR-6771-5p	HITS-CLIP	23313552
MIRT691275	hsa-miR-665	HITS-CLIP	23313552
MIRT631272	hsa-miR-216a-5p	HITS-CLIP	23824327
MIRT631271	hsa-miR-216b-5p	HITS-CLIP	23824327
MIRT631269	hsa-miR-8088	HITS-CLIP	23824327
MIRT631270	hsa-miR-1267	HITS-CLIP	23824327
MIRT631268	hsa-miR-367-5p	HITS-CLIP	23824327
MIRT631267	hsa-miR-6499-3p	HITS-CLIP	23824327
MIRT631266	hsa-miR-3135b	HITS-CLIP	23824327
MIRT631265	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT631264	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT631262	hsa-miR-3652	HITS-CLIP	23824327
MIRT631263	hsa-miR-4430	HITS-CLIP	23824327
MIRT631261	hsa-miR-143-5p	HITS-CLIP	23824327
MIRT631260	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT631259	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT631258	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT631257	hsa-miR-5698	HITS-CLIP	23824327
MIRT631272	hsa-miR-216a-5p	HITS-CLIP	23824327
MIRT631271	hsa-miR-216b-5p	HITS-CLIP	23824327
MIRT631269	hsa-miR-8088	HITS-CLIP	23824327
MIRT631270	hsa-miR-1267	HITS-CLIP	23824327
MIRT631268	hsa-miR-367-5p	HITS-CLIP	23824327
MIRT631266	hsa-miR-3135b	HITS-CLIP	23824327
MIRT631265	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT631264	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT631262	hsa-miR-3652	HITS-CLIP	23824327
MIRT631263	hsa-miR-4430	HITS-CLIP	23824327
MIRT631261	hsa-miR-143-5p	HITS-CLIP	23824327
MIRT631260	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT631259	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT631258	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT631257	hsa-miR-5698	HITS-CLIP	23824327
MIRT644037	hsa-miR-6890-3p	HITS-CLIP	23824327
MIRT644036	hsa-miR-660-3p	HITS-CLIP	23824327
MIRT644035	hsa-miR-1304-3p	HITS-CLIP	23824327
MIRT644034	hsa-miR-4772-3p	HITS-CLIP	23824327
MIRT644033	hsa-miR-29b-1-5p	HITS-CLIP	23824327
MIRT644032	hsa-miR-6791-3p	HITS-CLIP	23824327
MIRT644031	hsa-miR-6829-3p	HITS-CLIP	23824327
MIRT644030	hsa-miR-6836-3p	HITS-CLIP	23824327
MIRT644029	hsa-miR-29b-2-5p	HITS-CLIP	23824327
MIRT644028	hsa-miR-498	HITS-CLIP	23824327
MIRT631272	hsa-miR-216a-5p	HITS-CLIP	23824327
MIRT631271	hsa-miR-216b-5p	HITS-CLIP	23824327
MIRT631269	hsa-miR-8088	HITS-CLIP	23824327
MIRT631270	hsa-miR-1267	HITS-CLIP	23824327
MIRT631268	hsa-miR-367-5p	HITS-CLIP	23824327
MIRT631267	hsa-miR-6499-3p	HITS-CLIP	23824327
MIRT631266	hsa-miR-3135b	HITS-CLIP	23824327
MIRT631265	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT631264	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT631262	hsa-miR-3652	HITS-CLIP	23824327
MIRT631263	hsa-miR-4430	HITS-CLIP	23824327
MIRT631261	hsa-miR-143-5p	HITS-CLIP	23824327
MIRT631260	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT631259	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT631258	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT631257	hsa-miR-5698	HITS-CLIP	23824327
MIRT709253	hsa-miR-6072	HITS-CLIP	19536157
MIRT709251	hsa-miR-6891-3p	HITS-CLIP	19536157
MIRT709252	hsa-miR-136-5p	HITS-CLIP	19536157
MIRT709249	hsa-miR-4468	HITS-CLIP	19536157
MIRT709250	hsa-miR-4792	HITS-CLIP	19536157
MIRT709248	hsa-miR-130a-5p	HITS-CLIP	19536157
MIRT709247	hsa-miR-23a-3p	HITS-CLIP	19536157
MIRT709246	hsa-miR-23b-3p	HITS-CLIP	19536157
MIRT709245	hsa-miR-23c	HITS-CLIP	19536157
MIRT691293	hsa-miR-34b-3p	HITS-CLIP	23313552
MIRT631272	hsa-miR-216a-5p	HITS-CLIP	23313552
MIRT691292	hsa-miR-6808-5p	HITS-CLIP	23313552
MIRT691291	hsa-miR-6893-5p	HITS-CLIP	23313552
MIRT691290	hsa-miR-940	HITS-CLIP	23313552
MIRT691289	hsa-miR-3929	HITS-CLIP	23313552
MIRT691288	hsa-miR-4419b	HITS-CLIP	23313552
MIRT691287	hsa-miR-4478	HITS-CLIP	23313552
MIRT691286	hsa-miR-3614-5p	HITS-CLIP	23313552
MIRT691285	hsa-miR-6500-3p	HITS-CLIP	23313552
MIRT691284	hsa-miR-1207-3p	HITS-CLIP	23313552
MIRT691283	hsa-miR-6746-5p	HITS-CLIP	23313552
MIRT691282	hsa-miR-6787-3p	HITS-CLIP	23313552
MIRT691281	hsa-miR-4649-3p	HITS-CLIP	23313552
MIRT691280	hsa-miR-1827	HITS-CLIP	23313552
MIRT691279	hsa-miR-4722-5p	HITS-CLIP	23313552
MIRT691278	hsa-miR-423-3p	HITS-CLIP	23313552
MIRT691277	hsa-miR-7160-5p	HITS-CLIP	23313552
MIRT691276	hsa-miR-6771-5p	HITS-CLIP	23313552
MIRT691275	hsa-miR-665	HITS-CLIP	23313552
MIRT631272	hsa-miR-216a-5p	HITS-CLIP	23824327
MIRT631271	hsa-miR-216b-5p	HITS-CLIP	23824327
MIRT631269	hsa-miR-8088	HITS-CLIP	23824327
MIRT631270	hsa-miR-1267	HITS-CLIP	23824327
MIRT631268	hsa-miR-367-5p	HITS-CLIP	23824327
MIRT631267	hsa-miR-6499-3p	HITS-CLIP	23824327
MIRT631266	hsa-miR-3135b	HITS-CLIP	23824327
MIRT631265	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT631264	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT631262	hsa-miR-3652	HITS-CLIP	23824327
MIRT631263	hsa-miR-4430	HITS-CLIP	23824327
MIRT631261	hsa-miR-143-5p	HITS-CLIP	23824327
MIRT631260	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT631259	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT631258	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT631257	hsa-miR-5698	HITS-CLIP	23824327
MIRT631272	hsa-miR-216a-5p	HITS-CLIP	23824327
MIRT631271	hsa-miR-216b-5p	HITS-CLIP	23824327
MIRT631269	hsa-miR-8088	HITS-CLIP	23824327
MIRT631270	hsa-miR-1267	HITS-CLIP	23824327
MIRT631268	hsa-miR-367-5p	HITS-CLIP	23824327
MIRT631266	hsa-miR-3135b	HITS-CLIP	23824327
MIRT631265	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT631264	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT631262	hsa-miR-3652	HITS-CLIP	23824327
MIRT631263	hsa-miR-4430	HITS-CLIP	23824327
MIRT631261	hsa-miR-143-5p	HITS-CLIP	23824327
MIRT631260	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT631259	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT631258	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT631257	hsa-miR-5698	HITS-CLIP	23824327
MIRT644037	hsa-miR-6890-3p	HITS-CLIP	23824327
MIRT644036	hsa-miR-660-3p	HITS-CLIP	23824327
MIRT644035	hsa-miR-1304-3p	HITS-CLIP	23824327
MIRT644034	hsa-miR-4772-3p	HITS-CLIP	23824327
MIRT644033	hsa-miR-29b-1-5p	HITS-CLIP	23824327
MIRT644032	hsa-miR-6791-3p	HITS-CLIP	23824327
MIRT644031	hsa-miR-6829-3p	HITS-CLIP	23824327
MIRT644030	hsa-miR-6836-3p	HITS-CLIP	23824327
MIRT644029	hsa-miR-29b-2-5p	HITS-CLIP	23824327
MIRT644028	hsa-miR-498	HITS-CLIP	23824327
MIRT631272	hsa-miR-216a-5p	HITS-CLIP	23824327
MIRT631271	hsa-miR-216b-5p	HITS-CLIP	23824327
MIRT631269	hsa-miR-8088	HITS-CLIP	23824327
MIRT631270	hsa-miR-1267	HITS-CLIP	23824327
MIRT631268	hsa-miR-367-5p	HITS-CLIP	23824327
MIRT631267	hsa-miR-6499-3p	HITS-CLIP	23824327
MIRT631266	hsa-miR-3135b	HITS-CLIP	23824327
MIRT631265	hsa-miR-504-3p	HITS-CLIP	23824327
MIRT631264	hsa-miR-122-5p	HITS-CLIP	23824327
MIRT631262	hsa-miR-3652	HITS-CLIP	23824327
MIRT631263	hsa-miR-4430	HITS-CLIP	23824327
MIRT631261	hsa-miR-143-5p	HITS-CLIP	23824327
MIRT631260	hsa-miR-6501-5p	HITS-CLIP	23824327
MIRT631259	hsa-miR-4423-5p	HITS-CLIP	23824327
MIRT631258	hsa-miR-744-3p	HITS-CLIP	23824327
MIRT631257	hsa-miR-5698	HITS-CLIP	23824327
MIRT885028	hsa-miR-139-5p	CLIP-seq
MIRT885029	hsa-miR-1913	CLIP-seq
MIRT885030	hsa-miR-296-5p	CLIP-seq
MIRT885031	hsa-miR-324-3p	CLIP-seq
MIRT885032	hsa-miR-3689a-3p	CLIP-seq
MIRT885033	hsa-miR-3689c	CLIP-seq
MIRT885034	hsa-miR-4313	CLIP-seq
MIRT885035	hsa-miR-4481	CLIP-seq
MIRT885036	hsa-miR-4489	CLIP-seq
MIRT885037	hsa-miR-4648	CLIP-seq
MIRT885038	hsa-miR-4654	CLIP-seq
MIRT885039	hsa-miR-4727-5p	CLIP-seq
MIRT885040	hsa-miR-4728-5p	CLIP-seq
MIRT885041	hsa-miR-4745-5p	CLIP-seq
MIRT885042	hsa-miR-4769-5p	CLIP-seq
MIRT885043	hsa-miR-548v	CLIP-seq
MIRT885044	hsa-miR-639	CLIP-seq
MIRT885045	hsa-miR-720	CLIP-seq
MIRT885046	hsa-miR-103a	CLIP-seq
MIRT885047	hsa-miR-107	CLIP-seq
MIRT885048	hsa-miR-1184	CLIP-seq
MIRT885049	hsa-miR-1205	CLIP-seq
MIRT885050	hsa-miR-370	CLIP-seq
MIRT885051	hsa-miR-4418	CLIP-seq
MIRT885052	hsa-miR-509-3-5p	CLIP-seq
MIRT885053	hsa-miR-509-5p	CLIP-seq

Show/Hide all(10)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000775	Component	Chromosome, centromeric region	IEA
GO:0000776	Component	Kinetochore	IEA
GO:0000939	Component	Inner kinetochore	IPI	36085283
GO:0005634	Component	Nucleus	IEA
GO:0005634	Component	Nucleus	NAS	36085283
GO:0005654	Component	Nucleoplasm	TAS
GO:0005694	Component	Chromosome	IEA
GO:0005737	Component	Cytoplasm	IEA
GO:0005829	Component	Cytosol	TAS
GO:0007059	Process	Chromosome segregation	NAS	36085283

MIM	HGNC	e!Ensembl
610152	18352	ENSG00000100162

Protein

UniProt ID

Q9NSP4

Protein name

Centromere protein M (CENP-M) (Interphase centromere complex protein 39) (Proliferation-associated nuclear element protein 1)

Protein function

Component of the CENPA-NAC (nucleosome-associated) complex, a complex that plays a central role in assembly of kinetochore proteins, mitotic progression and chromosome segregation. The CENPA-NAC complex recruits the CENPA-CAD (nucleosome distal)

PDB

4P0T , 4WAU , 7PKN , 7QOO , 7R5S , 7R5V , 7XHN , 7XHO , 7YWX , 7YYH

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF11111	CENP-M	1 → 172	Centromere protein M (CENP-M)	Family

Tissue specificity

TISSUE SPECIFICITY: Isoform 3 is highly expressed in spleen, and intermediately in heart, prostate and ovary. Isoform 3 is highly expressed in resting CD19 B-cells and B-lineage chronic lymphocytic leukemia (B-CLL) cells and weakly expressed in activated

Sequence

MSVLRPLDKLPGLNTATILLVGTEDALLQQLADSMLKEDCASELKVHLAKSLPLPSSVNR
PRIDLIVFVVNLHSKYSLQNTEESLRHVDASFFLGKVCFLATGAGRESHCSIHRHTVVKL
AHTYQSPLLYCDLEVEGFRATMAQRLVRVLQICAGHVPGVSALNLLSLLRSSEGPSLEDL

Sequence length

180

Interactions

View interactions

	Reactome
			Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal Separation of Sister Chromatids Resolution of Sister Chromatid Cohesion RHO GTPases Activate Formins Deposition of new CENPA-containing nucleosomes at the centromere Mitotic Prometaphase EML4 and NUDC in mitotic spindle formation

Show/Hide Unknown Diseases (1)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Schizophrenia	Schizophrenia	N/A	N/A	GWAS

Show/Hide Text Mining Associations (20)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Adenocarcinoma of Lung	Stimulate	35130633
Breast Neoplasms	Associate	33000180, 38200449
Carcinogenesis	Associate	33000180
Carcinoma Hepatocellular	Associate	33591950
Carcinoma Renal Cell	Associate	36635779
Cell Transformation Neoplastic	Associate	33000180
Coronavirus Infections	Associate	37017853
Esophageal Squamous Cell Carcinoma	Associate	35496042
Hereditary Breast and Ovarian Cancer Syndrome	Associate	38200449
Kidney Neoplasms	Stimulate	36635779
Leukemia Lymphocytic Chronic B Cell	Associate	16391015
Neoplasm Metastasis	Associate	32705259, 35130633
Neoplasms	Stimulate	33000180, 37017853
Neoplasms	Associate	34573430, 35496042, 36635779, 38200449
Osteochondritis	Associate	31758856
Pancreatic Neoplasms	Stimulate	32705259
Precancerous Conditions	Associate	33000180
Prostatic Neoplasms	Associate	38179769
Scleroderma Systemic	Associate	23418382
Urinary Bladder Neoplasms	Associate	31828101

CENPM (centromere protein M)