Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7846
Gene name Gene Name - the full gene name approved by the HGNC.
Tubulin alpha 1a
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
TUBA1A
Synonyms (NCBI Gene) Gene synonyms aliases
B-ALPHA-1, LIS3, TUBA3
Disease Acronyms (UniProt) Disease acronyms from UniProt database
LIS3
Chromosome Chromosome number
12
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
12q13.12
Summary Summary of gene provided in NCBI Entrez Gene.
Microtubules of the eukaryotic cytoskeleton perform essential and diverse functions and are composed of a heterodimer of alpha and beta tubulins. The genes encoding these microtubule constituents belong to the tubulin superfamily, which is composed of six
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs113208258 G>A,C Pathogenic Coding sequence variant, missense variant
rs137853043 G>A,C Pathogenic, likely-pathogenic Coding sequence variant, missense variant
rs137853044 C>A,T Pathogenic Coding sequence variant, missense variant
rs137853045 T>G Pathogenic Coding sequence variant, missense variant
rs137853046 G>T Pathogenic Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT022850 hsa-miR-124-3p Microarray 18668037
MIRT001765 hsa-miR-30a-3p qRT-PCR 16239240
MIRT051216 hsa-miR-16-5p CLASH 23622248
MIRT047713 hsa-miR-10a-5p CLASH 23622248
MIRT043046 hsa-miR-324-5p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000086 Process G2/M transition of mitotic cell cycle TAS
GO:0000226 Process Microtubule cytoskeleton organization IBA 21873635
GO:0000278 Process Mitotic cell cycle IBA 21873635
GO:0003924 Function GTPase activity IEA
GO:0005198 Function Structural molecule activity TAS 12090300
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
602529 20766 ENSG00000167552
Protein
UniProt ID Q71U36
Protein name Tubulin alpha-1A chain (EC 3.6.5.-) (Alpha-tubulin 3) (Tubulin B-alpha-1) (Tubulin alpha-3 chain) [Cleaved into: Detyrosinated tubulin alpha-1A chain]
Protein function Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule en
PDB 5JCO , 6J8F , 6WSL , 7C1M , 7UN1 , 7UNG , 8J07 , 8SH7
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00091 Tubulin 3 214 Tubulin/FtsZ family, GTPase domain Domain
PF03953 Tubulin_C 263 393 Tubulin C-terminal domain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed at a high level in fetal brain. {ECO:0000269|PubMed:17584854}.
Sequence
Sequence length 451
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Phagosome
Apoptosis
Tight junction
Gap junction
Motor proteins
Alzheimer disease
Parkinson disease
Amyotrophic lateral sclerosis
Huntington disease
Prion disease
Pathways of neurodegeneration - multiple diseases
Pathogenic Escherichia coli infection
Salmonella infection
  Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane
MHC class II antigen presentation
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
Regulation of PLK1 Activity at G2/M Transition
HSP90 chaperone cycle for steroid hormone receptors (SHR)
Loss of Nlp from mitotic centrosomes
Recruitment of mitotic centrosome proteins and complexes
Loss of proteins required for interphase microtubule organization from the centrosome
Recruitment of NuMA to mitotic centrosomes
Recycling pathway of L1
Hedgehog 'off' state
Cilium Assembly
Anchoring of the basal body to the plasma membrane
Intraflagellar transport
RHO GTPases activate IQGAPs
RHO GTPases Activate Formins
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic
COPI-independent Golgi-to-ER retrograde traffic
Mitotic Prometaphase
The role of GTSE1 in G2/M progression after G2 checkpoint
AURKA Activation by TPX2
Carboxyterminal post-translational modifications of tubulin
HCMV Early Events
Aggrephagy
EML4 and NUDC in mitotic spindle formation
Sealing of the nuclear envelope (NE) by ESCRT-III
Kinesins
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Agenesis of corpus callosum Agenesis of corpus callosum rs754914260, rs1057519053, rs1057519056, rs1057519054, rs1057519055, rs1057519057, rs1384496494, rs1599017933
Limb-girdle muscular dystrophy Alpha-Sarcoglycanopathies rs2137534216, rs104894422, rs762777463, rs104894423, rs137854524, rs137854521, rs137854523, rs137854529, rs398123555, rs119463996, rs587777814, rs119463992, rs267606971, rs267606967, rs28941782
View all (762 more)
Cryptorchidism Cryptorchidism rs121912555, rs104894697, rs104894698, rs398122886
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Unknown
Disease term Disease name Evidence References Source
Tubulinopathy-Associated Dysgyria tubulinopathy-associated dysgyria GenCC
Associations from Text Mining
Disease Name Relationship Type References
Adenocarcinoma of Lung Associate 38095634
Agenesis of Cerebellar Vermis Associate 37131188
Agenesis of Corpus Callosum Associate 20466733, 25053001, 25059107, 26493046
Allanson Pantzar McLeod syndrome Associate 22948023, 26493046
Anemia Aplastic Associate 22948023
Arthritis Rheumatoid Associate 34079550
Basal Ganglia Diseases Associate 22948023, 40179460
Brain Diseases Associate 22948023
Brain Stem Neoplasms Associate 22948023
Central Nervous System Vascular Malformations Associate 26493046