Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7779
Gene name Gene Name - the full gene name approved by the HGNC.
Solute carrier family 30 member 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
SLC30A1
Synonyms (NCBI Gene) Gene synonyms aliases
ZNT1, ZRC1
Chromosome Chromosome number
1
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
1q32.3
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT001501 hsa-miR-155-5p pSILAC 18668040
MIRT001501 hsa-miR-155-5p Proteomics;Other 18668040
MIRT031411 hsa-miR-16-5p Proteomics 18668040
MIRT032247 hsa-let-7b-5p Proteomics 18668040
MIRT041483 hsa-miR-193b-3p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001701 Process In utero embryonic development IEA
GO:0005385 Function Zinc ion transmembrane transporter activity IBA 21873635
GO:0005385 Function Zinc ion transmembrane transporter activity TAS
GO:0005515 Function Protein binding IPI 18158319, 25657003
GO:0005737 Component Cytoplasm IDA 18158319
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
609521 11012 ENSG00000170385
Protein
UniProt ID Q9Y6M5
Protein name Proton-coupled zinc antiporter SLC30A1 (Solute carrier family 30 member 1) (Zinc transporter 1)
Protein function Zinc ion:proton antiporter that could function at the plasma membrane mediating zinc efflux from cells against its electrochemical gradient protecting them from intracellular zinc accumulation and toxicity (PubMed:31471319). Alternatively, could
PDB 8J2G , 8XM6 , 8XMA , 8XMF , 8XMJ , 8ZB0 , 8ZSB , 8ZSZ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01545 Cation_efflux 11 284 Cation efflux family Family
Sequence
MGCWGRNRGRLLCMLALTFMFMVLEVVVSRVTSSLAMLSDSFHMLSDVLALVVALVAERF
ARRTHATQKNTFGWIRAEVMGALVNAIFLTGLCFAILLEAIERFIEPHEMQQPLVVLGVG
VAGLLVNVLGLCLFHHHSGFSQDSGHGHSHGGHGHGHGLPKGPRVKSTRPGSSDINVAPG
EQGPDQEETNTLVANTSNSNGLKLDPADPENPRSGDTVEVQVNGNLVREPDHMELEEDRA
GQLNMRGVFLHVLGDALGSVIVVVNALVFYFSWKGCSEGDFCVN
PCFPDPCKAFVEIINS
THASVYEAGPCWVLYLDPTLCVVMVCILLYTTYPLLKESALILLQTVPKQIDIRNLIKEL
RNVEGVEEVHELHVWQLAGSRIIATAHIKCEDPTSYMEVAKTIKDVFHNHGIHATTIQPE
FASVGSKSSVVPCELACRTQCALKQCCGTLPQAPSGKDAEKTPAVSISCLELSNNLEKKP
RRTKAENIPAVVIEIKNMPNKQPESSL
Sequence length 507
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Mineral absorption   Zinc efflux and compartmentalization by the SLC30 family
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Seizure Complex partial seizures, Generalized seizures, Visual seizure, Tonic - clonic seizures, Single Seizure rs587784365, rs28939683, rs74315390, rs28939684, rs74315391, rs267607198, rs74315392, rs118192244, rs118192250, rs121917749, rs121917750, rs121917751, rs121917752, rs267606670, rs267607061
View all (179 more)
23266720
Unknown
Disease term Disease name Evidence References Source
Hypertension Hypertension GWAS
Dementia Dementia GWAS
Diabetes Diabetes GWAS
Associations from Text Mining
Disease Name Relationship Type References
Adenocarcinoma Associate 35049094
Alzheimer Disease Associate 27300264
Buschke Lowenstein Tumor Associate 33908744
Condylomata Acuminata Associate 33908744
Depressive Disorder Major Stimulate 27661418
Drug Related Side Effects and Adverse Reactions Associate 32915786
Epidermodysplasia Verruciformis Associate 18158319
Infections Associate 31320712
Neuroblastoma Associate 32915786
Neurodegenerative Diseases Associate 30623748