Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene SNPs miRNA Gene ontology Other IDs Protein
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	7701
Gene name Gene Name - the full gene name approved by the HGNC.	Zinc finger protein 142
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	ZNF142
Synonyms (NCBI Gene) Gene synonyms aliases	HA4654, NEDISHM, pHZ-49
Chromosome Chromosome number	2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	2q35
Summary Summary of gene provided in NCBI Entrez Gene.	The protein encoded by this gene belongs to the Kruppel family of C2H2-type zinc finger proteins. It contains 31 C2H2-type zinc fingers and may be involved in transcriptional regulation. Alternatively spliced transcript variants have been found for this g

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SNP ID	Visualize variation	Clinical significance	Consequence
rs367658234	G>A,C,T	Conflicting-interpretations-of-pathogenicity	Coding sequence variant, genic downstream transcript variant, synonymous variant, missense variant
rs546151500	G>A,T	Likely-pathogenic	Synonymous variant, genic downstream transcript variant, coding sequence variant, stop gained
rs748323893	C>T	Pathogenic-likely-pathogenic	Genic downstream transcript variant, coding sequence variant, synonymous variant
rs756225038	G>A	Likely-pathogenic	Genic downstream transcript variant, coding sequence variant, missense variant
rs776031837	G>-	Pathogenic-likely-pathogenic	Coding sequence variant, frameshift variant, genic downstream transcript variant
rs1275959058	C>A,T	Conflicting-interpretations-of-pathogenicity	Coding sequence variant, missense variant, genic downstream transcript variant
rs1447313633	TT>-	Pathogenic	Coding sequence variant, genic downstream transcript variant, frameshift variant
rs1559296368	C>-	Pathogenic	Coding sequence variant, genic downstream transcript variant, frameshift variant
rs1575060677	C>-	Pathogenic	Frameshift variant, genic downstream transcript variant, coding sequence variant

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miRTarBase ID	miRNA	Experiments
MIRT1516581	hsa-miR-1915	CLIP-seq
MIRT1516582	hsa-miR-3620	CLIP-seq
MIRT1516583	hsa-miR-3651	CLIP-seq
MIRT1516584	hsa-miR-3973	CLIP-seq
MIRT1516585	hsa-miR-4476	CLIP-seq
MIRT1516586	hsa-miR-4676-5p	CLIP-seq
MIRT1516587	hsa-miR-4726-3p	CLIP-seq
MIRT1516588	hsa-miR-520g	CLIP-seq
MIRT1516589	hsa-miR-520h	CLIP-seq
MIRT1516590	hsa-miR-548k	CLIP-seq
MIRT1516591	hsa-miR-554	CLIP-seq
MIRT1516592	hsa-miR-575	CLIP-seq
MIRT2155904	hsa-miR-122	CLIP-seq
MIRT2155905	hsa-miR-1252	CLIP-seq
MIRT2155906	hsa-miR-1253	CLIP-seq
MIRT2155907	hsa-miR-2278	CLIP-seq
MIRT2155908	hsa-miR-3622a-5p	CLIP-seq
MIRT1516583	hsa-miR-3651	CLIP-seq
MIRT2155909	hsa-miR-3653	CLIP-seq
MIRT2155910	hsa-miR-4311	CLIP-seq
MIRT2155911	hsa-miR-4423-3p	CLIP-seq
MIRT2155912	hsa-miR-4426	CLIP-seq
MIRT2155913	hsa-miR-4481	CLIP-seq
MIRT2155914	hsa-miR-452	CLIP-seq
MIRT2155915	hsa-miR-4534	CLIP-seq
MIRT2155916	hsa-miR-4647	CLIP-seq
MIRT2155917	hsa-miR-4662b	CLIP-seq
MIRT2155918	hsa-miR-4668-3p	CLIP-seq
MIRT2155919	hsa-miR-4676-3p	CLIP-seq
MIRT1516586	hsa-miR-4676-5p	CLIP-seq
MIRT2155920	hsa-miR-4745-5p	CLIP-seq
MIRT2155921	hsa-miR-555	CLIP-seq
MIRT1516592	hsa-miR-575	CLIP-seq
MIRT2155922	hsa-miR-642b	CLIP-seq
MIRT1516586	hsa-miR-4676-5p	CLIP-seq
MIRT1516592	hsa-miR-575	CLIP-seq
MIRT2155904	hsa-miR-122	CLIP-seq
MIRT2155905	hsa-miR-1252	CLIP-seq
MIRT2155906	hsa-miR-1253	CLIP-seq
MIRT2667914	hsa-miR-3134	CLIP-seq
MIRT2667915	hsa-miR-3185	CLIP-seq
MIRT1516583	hsa-miR-3651	CLIP-seq
MIRT2155909	hsa-miR-3653	CLIP-seq
MIRT2155910	hsa-miR-4311	CLIP-seq
MIRT2155912	hsa-miR-4426	CLIP-seq
MIRT2155913	hsa-miR-4481	CLIP-seq
MIRT2155915	hsa-miR-4534	CLIP-seq
MIRT2155916	hsa-miR-4647	CLIP-seq
MIRT2155917	hsa-miR-4662b	CLIP-seq
MIRT2155918	hsa-miR-4668-3p	CLIP-seq
MIRT1516586	hsa-miR-4676-5p	CLIP-seq
MIRT2155920	hsa-miR-4745-5p	CLIP-seq
MIRT2667916	hsa-miR-4765	CLIP-seq
MIRT2155921	hsa-miR-555	CLIP-seq
MIRT1516592	hsa-miR-575	CLIP-seq
MIRT2155922	hsa-miR-642b	CLIP-seq
MIRT2155904	hsa-miR-122	CLIP-seq
MIRT2155905	hsa-miR-1252	CLIP-seq
MIRT2155906	hsa-miR-1253	CLIP-seq
MIRT2155909	hsa-miR-3653	CLIP-seq
MIRT2155910	hsa-miR-4311	CLIP-seq
MIRT2155912	hsa-miR-4426	CLIP-seq
MIRT2155913	hsa-miR-4481	CLIP-seq
MIRT2155915	hsa-miR-4534	CLIP-seq
MIRT2155916	hsa-miR-4647	CLIP-seq
MIRT2155917	hsa-miR-4662b	CLIP-seq
MIRT2155918	hsa-miR-4668-3p	CLIP-seq
MIRT2155920	hsa-miR-4745-5p	CLIP-seq
MIRT2155921	hsa-miR-555	CLIP-seq
MIRT2155922	hsa-miR-642b	CLIP-seq

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GO ID	Ontology	Definition	Evidence
GO:0000977	Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0003677	Function	DNA binding	IEA
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0010468	Process	Regulation of gene expression	IEA
GO:0046872	Function	Metal ion binding	IEA

MIM	HGNC	e!Ensembl
604083	12927	ENSG00000115568

Protein

UniProt ID

P52746

Protein name

Zinc finger protein 142

Protein function

May be involved in transcriptional regulation.

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00096	zf-C2H2	191 → 212	Zinc finger, C2H2 type	Domain
PF13909	zf-H2C2_5	401 → 425		Domain
PF00096	zf-C2H2	1536 → 1559	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	1565 → 1587	Zinc finger, C2H2 type	Domain

Sequence

MTDPLLDSQPASSTGEMDGLCPELLLIPPPLSNRGILGPVQSPCPSRDPAPIPTEPGCLL
VEATATEEGPGNMEIIVETVAGTLTPGAPGETPAPKLPPGEREPSQEAGTPLPGQETAEE
ENVEKEEKSDTQKDSQKAVDKGQGAQRLEGDVVSGTESLFKTHMCPECKRCFKKRTHLVE
HLHLHFPDPSLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMAS
MHEDISNFYSDTYACPVCREEFRLSQALKEHLKSHTAAAAAEPLPLRCFQEGCSYAAPDR
KAFIKHLKETHGVRAVECRHHSCPMLFATAEAMEAHHKSHYAFHCPHCDFACSNKHLFRK
HKKQGHPGSEELRCTFCPFATFNPVAYQDHVGKMHAHEKIHQCPECNFATAHKRVLIRHM
LLHTGEKPHKCELCDFTCRDVSYLSKHMLTHSNTKDYMCTECGYVTKWKHYLRVHMRKHA
GDLRYQCNQCSYRCHRADQLSSHKLRHQGKSLMCEVCAFACKRKYELQKHMASQHHPGTP
APLYPCHYCSYQSRHKQAVLSHENCKHTRLREFHCALCDYRTFSNTTLLFHKRKAHGYVP
GDQAWQLRYASQEPEGAMQGPTPPPDSEPSNQLSARPEGPGHEPGTVVDPSLDQALPEMS
EEVNTGRQEGSEAPHGGDLGGSPSPAEVEEGSCTLHLEALGVELESVTEPPLEEVTETAP
MEFRPLGLEGPDGLEGPELSSFEGIGTSDLSAEENPLLEKPVSEPSTNPPSLEEAPNNWV
GTFKTTPPAETAPLPPLPESESLLKALRRQDKEQAEALVLEGRVQMVVIQGEGRAFRCPH
CPFITRREKALNLHSRTGCQGRREPLLCPECGASFKQQRGLSTHLLKKCPVLLRKNKGLP
RPDSPIPLQPVLPGTQASEDTESGKPPPASQEAELLLPKDAPLELPREPEETEEPLATVS
GSPVPPAGNSLPTEAPKKHCFDPVPPAGNSSPTEAPKKHHLDPVPPAGNSSPTEALKKHR
FEQGKFHCNSCPFLCSRLSSITSHVAEGCRGGRGGGGKRGTPQTQPDVSPLSNGDSAPPK
NGSTESSSGDGDTVLVQKQKGARFSCPTCPFSCQQERALRTHQIRGCPLEESGELHCSLC
PFTAPAATALRLHQKRRHPTAAPARGPRPHLQCGDCGFTCKQSRCMQQHRRLKHEGVKPH
QCPFCDFSTTRRYRLEAHQSRHTGIGRIPCSSCPQTFGTNSKLRLHRLRVHDKTPTHFCP
LCDYSGYLRHDITRHVNSCHQGTPAFACSQCEAQFSSETALKQHALRRHPEPAQPAPGSP
AETTEGPLHCSRCGLLCPSPASLRGHTRKQHPRLECGACQEAFPSRLALDEHRRQQHFSH
RCQLCDFAARERVGLVKHYLEQHEETSAAVAASDGDGDAGQPPLHCPFCDFTCRHQLVLD
HHVKGHGGTRLYKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHMR
IHKEERKYLCPECGYKCKWVNQLKYHMTKHTGLKPYQCPECEYCTNRADALRVHQETRHR
EARAFMCEQCGKAFKTRFLLRTHLRKHSEAKPYVCNVCHRAFRWAAGLRHHALTHTDRHP
FFCRLCNYKAKQKFQVVKHVRRHHPDQADPNQGVGKDPTTPTVHLHDVQLEDPSPPAPAA
PHTGPEG

Sequence length

1687

Interactions

View interactions

ZNF142 (zinc finger protein 142)