ZSCAN20 (zinc finger and SCAN domain containing 20)

Gene

• Entrez ID: 7579
• Gene name: Zinc finger and SCAN domain containing 20
• Gene symbol: ZSCAN20
• Synonyms (NCBI Gene): KOX29, ZFP-31, ZNF31, ZNF360
• Chromosome: 1
• Chromosome location: 1p35.1

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT1543564	hsa-miR-1225-5p	CLIP-seq
MIRT1543565	hsa-miR-3183	CLIP-seq
MIRT1543566	hsa-miR-329	CLIP-seq
MIRT1543567	hsa-miR-362-3p	CLIP-seq
MIRT1543568	hsa-miR-3941	CLIP-seq
MIRT1543569	hsa-miR-3978	CLIP-seq
MIRT1543570	hsa-miR-4292	CLIP-seq
MIRT1543571	hsa-miR-4308	CLIP-seq
MIRT1543572	hsa-miR-4717-5p	CLIP-seq
MIRT1543573	hsa-miR-4723-3p	CLIP-seq
MIRT1543574	hsa-miR-548c-3p	CLIP-seq
MIRT1543575	hsa-miR-561	CLIP-seq
MIRT1543576	hsa-miR-603	CLIP-seq
MIRT1543577	hsa-miR-645	CLIP-seq
MIRT1543578	hsa-miR-670	CLIP-seq
MIRT2164011	hsa-miR-147	CLIP-seq
MIRT2164012	hsa-miR-193a-5p	CLIP-seq
MIRT2164013	hsa-miR-300	CLIP-seq
MIRT2164014	hsa-miR-381	CLIP-seq
MIRT2164015	hsa-miR-3911	CLIP-seq
MIRT2164016	hsa-miR-4320	CLIP-seq
MIRT2164017	hsa-miR-4666-5p	CLIP-seq
MIRT2164018	hsa-miR-4778-5p	CLIP-seq
MIRT2164019	hsa-miR-4790-3p	CLIP-seq
MIRT2164020	hsa-miR-548p	CLIP-seq
MIRT2164021	hsa-miR-600	CLIP-seq
MIRT2164022	hsa-miR-624	CLIP-seq
MIRT2164023	hsa-miR-642b	CLIP-seq
MIRT2164024	hsa-miR-644	CLIP-seq
MIRT2383180	hsa-miR-1226	CLIP-seq
MIRT2383181	hsa-miR-1229	CLIP-seq
MIRT2164011	hsa-miR-147	CLIP-seq
MIRT2164012	hsa-miR-193a-5p	CLIP-seq
MIRT2164013	hsa-miR-300	CLIP-seq
MIRT1543565	hsa-miR-3183	CLIP-seq
MIRT2164014	hsa-miR-381	CLIP-seq
MIRT2164015	hsa-miR-3911	CLIP-seq
MIRT2164016	hsa-miR-4320	CLIP-seq
MIRT2164017	hsa-miR-4666-5p	CLIP-seq
MIRT1543573	hsa-miR-4723-3p	CLIP-seq
MIRT2383182	hsa-miR-4733-3p	CLIP-seq
MIRT2164018	hsa-miR-4778-5p	CLIP-seq
MIRT2383183	hsa-miR-543	CLIP-seq
MIRT2164020	hsa-miR-548p	CLIP-seq
MIRT2164021	hsa-miR-600	CLIP-seq
MIRT2164022	hsa-miR-624	CLIP-seq
MIRT2164023	hsa-miR-642b	CLIP-seq
MIRT2164024	hsa-miR-644	CLIP-seq
MIRT2164011	hsa-miR-147	CLIP-seq
MIRT2164012	hsa-miR-193a-5p	CLIP-seq
MIRT2164013	hsa-miR-300	CLIP-seq
MIRT2164014	hsa-miR-381	CLIP-seq
MIRT2164015	hsa-miR-3911	CLIP-seq
MIRT2164016	hsa-miR-4320	CLIP-seq
MIRT2164017	hsa-miR-4666-5p	CLIP-seq
MIRT2164018	hsa-miR-4778-5p	CLIP-seq
MIRT2164020	hsa-miR-548p	CLIP-seq
MIRT2164021	hsa-miR-600	CLIP-seq
MIRT2164022	hsa-miR-624	CLIP-seq
MIRT2164024	hsa-miR-644	CLIP-seq
MIRT1543565	hsa-miR-3183	CLIP-seq
MIRT1543572	hsa-miR-4717-5p	CLIP-seq
MIRT1543573	hsa-miR-4723-3p	CLIP-seq
MIRT1543577	hsa-miR-645	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0003677	Function	DNA binding	IEA
GO:0005515	Function	Protein binding	IPI	16189514, 26871637, 33961781
GO:0005634	Component	Nucleus	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0046872	Function	Metal ion binding	IEA
GO:1990837	Function	Sequence-specific double-stranded DNA binding	IEA

Other IDs

• MIM: 611315
• HGNC: 13093
• e!Ensembl: ENSG00000121903

Protein

• UniProt ID: P17040
• Protein name: Zinc finger and SCAN domain-containing protein 20 (Zinc finger protein 31) (Zinc finger protein 360) (Zinc finger protein KOX29)
• Protein function: May be involved in transcriptional regulation.
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF02023	SCAN	47 → 136	SCAN domain	Domain
  PF13837	Myb_DNA-bind_4	323 → 408		Domain
  PF13837	Myb_DNA-bind_4	483 → 568		Domain
  PF00096	zf-C2H2	710 → 732	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	738 → 760	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	766 → 788	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	794 → 816	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	875 → 897	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	903 → 925	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	931 → 953	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	959 → 981	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	987 → 1009	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	1015 → 1037	Zinc finger, C2H2 type	Domain

• Sequence:

  MAMALELQAQASPQPEPEELLIVKLEEDSWGSESKLWEKDRGSVSGPEASRQRFRQFQYR
  DAAGPHEAFSQLWALCCRWLRPEIRLKEQILELLVLEQFLTILPREVQTWVQARHPESGE
  EAVALVEDWHRETRTAGQSGLELHTEETRPLKTGEEAQSFQLQPVDPWPEGQSQKKGVKN
  TCPDLPNHLNAEVAPQPLKESAVLTPRVPTLPKMGSVGDWEVTAESQEALGPGKHAEKEL
  CKDPPGDDCGNSVCLGVPVSKPSNTSEKEQGPEFWGLSLINSGKRSTADYSLDNEPAQAL
  TWRDSRAWEEQYQWDVEDMKVSGVHWGYEETKTFLAILSESPFSEKLRTCHQNRQVYRAI
  AEQLRARGFLRTLEQCRYRVKNLLRNYRKAKSSHPPGTCPFYEELEALVRARTAIRATDG
  PGEAVALPRLGYSDAEMDEQEEGGWDPEEMAEDCNGAGLVNVESTQGPRIAGAPALFQSR
  IAGVHWGYEETKAFLAILSESPFSEKLRTCHQNSQVYRAIAERLCALGFLRTLEQCRYRF
  KNLLRSYRKAKSSHPPGTCPFYEELDSLMRARAAVRAMGTVREAAGLPRCGQSSAETDAQ
  EAWGEVANEDAVKPSTLCPKAPDMGFEMRHEDEDQISEQDIFEGLPGALSKCPTEAVCQP
  LDWGEDSENENEDEGQWGNPSQEQWQESSSEEDLEKLIDHQGLYLAEKPYKCDTCMKSFS
  RSSHFIAHQRIHTGEKPYKCLECGKNFSDRSNLNTHQRIHTGEKPYKCLECGKSFSDHSN
  LITHQRIHTGEKPYKCGECWKSFNQSSNLLKHQRIHLGGNPDQCSEPGGNFAQSPSFSAH
  WRNSTEETAPEQPQSISKDLNSPGPHSTNSGEKLYECSECGRSFSKSSALISHQRIHTGE
  KPYECAECGKSFSKSSTLANHQRTHTGEKPYKCVDCGKCFSERSKLITHQRVHTGEKPYK
  CLECGKFFRDRSNLITHQRIHTGEKPYKCRECGKCFNQSSSLIIHQRIHTGEKPYKCTEC
  GKDFNNSSHFSAHRRTHAGGKAS

• Sequence length: 1043