Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7504
Gene name Gene Name - the full gene name approved by the HGNC.
X-linked Kx blood group antigen, Kell and VPS13A binding protein
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
XK
Synonyms (NCBI Gene) Gene synonyms aliases
KX, NA, NAC, X1k, XKR1
Chromosome Chromosome number
X
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
Xp21.1
Summary Summary of gene provided in NCBI Entrez Gene.
This locus controls the synthesis of the Kell blood group `precursor substance` (Kx). Mutations in this gene have been associated with McLeod syndrome, an X-linked, recessive disorder characterized by abnormalities in the neuromuscular and hematopoietic s
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs28933690 T>C Pathogenic Coding sequence variant, missense variant, genic downstream transcript variant
rs104894953 G>A Pathogenic Coding sequence variant, stop gained, genic downstream transcript variant
rs104894954 C>T Pathogenic Coding sequence variant, stop gained, genic downstream transcript variant
rs1556450491 A>T Likely-pathogenic Genic downstream transcript variant, stop gained, coding sequence variant
rs1602145991 G>A Pathogenic Splice donor variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT024667 hsa-miR-215-5p Microarray 19074876
MIRT026742 hsa-miR-192-5p Microarray 19074876
MIRT027860 hsa-miR-98-5p Microarray 19088304
MIRT030081 hsa-miR-26b-5p Microarray 19088304
MIRT044236 hsa-miR-29c-3p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005215 Function Transporter activity TAS 8004674
GO:0005515 Function Protein binding IPI 7737196
GO:0005886 Component Plasma membrane TAS
GO:0006865 Process Amino acid transport IEA
GO:0016021 Component Integral component of membrane TAS 9647734
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
314850 12811 ENSG00000047597
Protein
UniProt ID P51811
Protein name Endoplasmic reticulum membrane adapter protein XK (Kell complex 37 kDa component) (Kx antigen) (Membrane transport protein XK) (XK-related protein 1)
Protein function Recruits the lipid transfer protein VPS13A from lipid droplets to the endoplasmic reticulum (ER) membrane.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF09815 XK-related 5 376 XK-related protein Family
Tissue specificity TISSUE SPECIFICITY: High levels in skeletal muscle, heart, brain, and pancreas; low levels in placenta, lung, liver, and kidney. {ECO:0000269|PubMed:8004674}.
Sequence
Sequence length 444
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Peptide ligand-binding receptors
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Atrial fibrillation Atrial Fibrillation rs120074192, rs121908590, rs121908593, rs121434558, rs587776851, rs387906612, rs387906613, rs387906614, rs387906615, rs199472687, rs199472705, rs199473324, rs587777336, rs587777339, rs587777557
View all (6 more)
Cardiomyopathy Cardiomyopathy, Dilated, Cardiomyopathies rs267607003, rs267607002, rs267607004, rs63750743, rs121908333, rs121908334, rs104894655, rs121434420, rs121434421, rs193922674, rs111517471, rs121908987, rs193922384, rs121909374, rs121909377
View all (900 more)
Mcleod neuroacanthocytosis syndrome Blood group deletion syndrome, McLeod neuroacanthocytosis syndrome rs1602145991, rs1602158863, rs1602159120, rs28933690, rs2146834690, rs104894953, rs104894954 11761473, 12823753, 11961232
Mental retardation Mental Retardation, X-Linked rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
19377476
Unknown
Disease term Disease name Evidence References Source
Behavior disorders Behavior Disorders 11261514 ClinVar
Mental depression Depressive disorder ClinVar