Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7466
Gene name Gene Name - the full gene name approved by the HGNC.
Wolframin ER transmembrane glycoprotein
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
WFS1
Synonyms (NCBI Gene) Gene synonyms aliases
CTRCT41, WFRS, WFS, WFSL
Chromosome Chromosome number
4
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
4p16.1
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a transmembrane protein, which is located primarily in the endoplasmic reticulum and ubiquitously expressed with highest levels in brain, pancreas, heart, and insulinoma beta-cell lines. Mutations in this gene are associated with Wolfram
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs6446482 C>A,G Conflicting-interpretations-of-pathogenicity, benign Intron variant
rs10010131 A>G Benign, pathogenic Intron variant
rs28937890 C>T Pathogenic, uncertain-significance Missense variant, coding sequence variant
rs28937891 G>A,T Pathogenic Missense variant, coding sequence variant
rs28937892 C>A,T Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT000164 hsa-miR-21-5p Quantitative proteomic approach 19253296
MIRT025906 hsa-miR-7-5p Microarray 19073608
MIRT1492376 hsa-miR-1246 CLIP-seq
MIRT1492377 hsa-miR-2110 CLIP-seq
MIRT1492378 hsa-miR-31 CLIP-seq
Transcription factors
Transcription factor Regulation Reference
XBP1 Unknown 16539657
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IDA 20160352
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IEA
GO:0001822 Process Kidney development IMP 9817917
GO:0003091 Process Renal water homeostasis IMP 9817917
GO:0005515 Function Protein binding IPI 17947299, 21044950, 23035048, 25274773, 32296183, 32814053
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
606201 12762 ENSG00000109501
Protein
UniProt ID O76024
Protein name Wolframin
Protein function Participates in the regulation of cellular Ca(2+) homeostasis, at least partly, by modulating the filling state of the endoplasmic reticulum Ca(2+) store (PubMed:16989814). Negatively regulates the ER stress response and positively regulates the
Family and domains
Tissue specificity TISSUE SPECIFICITY: Highly expressed in heart followed by brain, placenta, lung and pancreas. Weakly expressed in liver, kidney and skeletal muscle. Also expressed in islet and beta-cell insulinoma cell line.
Sequence
MDSNTAPLGPSCPQPPPAPQPQARSRLNATASLEQERSERPRAPGPQAGPGPGVRDAAAP
AEPQAQHTRSRERADGTGPTKGDMEIPFEEVLERAKAGDPKAQTEVGKHYLQLAGDTDEE
LNSCTAVDWLVLAAKQGRREAVKLLRRCLADRRGITSENEREVRQLSSETDLERAVRKAA
LVMYWKLNPKKKKQVAVAELLENVGQVNEHDGGAQPGPVPKSLQKQRRMLERLVSSESKN
YIALDDFVEITKKYAKGVIPSSLFLQDDEDDDELAGKSPEDLPLRLKVVKYPLHAIMEIK
EYLIDMASRAGMHWLSTIIPTHHINALIFFFIVSNLTIDFFAFFIPLVIFYLSFISMVIC
TLKVFQDSKAWENFRTLTDLLLRFEPNLDVEQAEVNFGWNHLEPYAHFLLSVFFVIFSFP
IASKDCIPCSELAVITGFFTVTSYLSLSTHAEPYTRRALATEVTAGLLSLLPSMPLNWPY
LKVLGQTFITVPVGHLVVLNVSVPCLLYVYLLYLFFRMAQLRNFKGTYCYLVPYLVCFMW
CELSVVILLESTGLGLLRASIGYFLFLFALPILVAGLALVGVLQFARWFTSLELTKIAVT
VAVCSVPLLLRWWTKASFSVVGMVKSLTRSSMVKLILVWLTAIVLFCWFYVYRSEGMKVY
NSTLTWQQYGALCGPRAWKETNMARTQILCSHLEGHRVTWTGRFKYVRVTDIDNSAESAI
NMLPFFIGDWMRCLYGEAYPACSPGNTSTAEEELCRLKLLAKHPCHIKKFDRYKFEITVG
MPFSSGADGSRSREEDDVTKDIVLRASSEFKSVLLSLRQGSLIEFSTILEGRLGSKWPVF
ELKAISCLNCMAQLSPTRRHVKIEHDWRSTVHGAVKFAFDFFFFPFLSAA
Sequence length 890
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Protein processing in endoplasmic reticulum   XBP1(S) activates chaperone genes
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Post-translational protein phosphorylation
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Causal Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
Disease merge term Disease name dbSNP ID References
Cataract cataract 41 rs398123066 N/A
Deafness Autosomal dominant nonsyndromic hearing loss, Autosomal dominant nonsyndromic hearing loss 6 rs387906930, rs104893882, rs1131691778, rs74315205, rs372855769, rs28937893, rs104893883 N/A
Diabetes Mellitus diabetes mellitus, Type 2 diabetes mellitus rs143064649, rs199946797, rs1362648752, rs1553876668 N/A
Optic Atrophy optic atrophy rs760337383, rs1560408865, rs145639028, rs1057368575, rs1064794257, rs774265764, rs199946797 N/A
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Autism autistic behavior N/A N/A ClinVar
Diabetes Mild age-related type 2 diabetes, Type 2 diabetes with neurological manifestations (PheCode 250.24), Type 2 diabetes with renal manifestations (PheCode 250.22), Type 2 diabetes with ophthalmic manifestations (PheCode 250.23), Type 2 diabetes (PheCode 250.2), Diabetes, Youth-onset type 2 diabetes, Type 2 diabetes, Type 2 diabetes (adjusted for BMI) N/A N/A GWAS
hearing impairment Hearing impairment N/A N/A ClinVar
Heart Failure Heart failure N/A N/A GWAS
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
18 Hydroxylase deficiency Associate 36384999
6q24 Related Transient Neonatal Diabetes Mellitus Associate 28468959
Alstrom Syndrome Associate 28432734
Attention Deficit and Disruptive Behavior Disorders Associate 37399203
Auditory neuropathy Associate 39422244
Autoimmune Diseases Associate 18688868
Bipolar Disorder Associate 15473915
Blindness Associate 34006618, 36933359
Cakut Associate 27151922
Cardiomyopathy Dilated Associate 36967753