Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7332
Gene name Gene Name - the full gene name approved by the HGNC.
Ubiquitin conjugating enzyme E2 L3
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
UBE2L3
Synonyms (NCBI Gene) Gene synonyms aliases
E2-F1, L-UBC, UBCH7, UbcM4
Chromosome Chromosome number
22
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
22q11.21
Summary Summary of gene provided in NCBI Entrez Gene.
The modification of proteins with ubiquitin is an important cellular mechanism for targeting abnormal or short-lived proteins for degradation. Ubiquitination involves at least three classes of enzymes: ubiquitin-activating enzymes (E1s), ubiquitin-conjuga
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT023267 hsa-miR-122-5p Microarray 17612493
MIRT048772 hsa-miR-93-5p CLASH 23622248
MIRT038073 hsa-miR-423-5p CLASH 23622248
MIRT054872 hsa-miR-125a-5p qRT-PCR 24675842
MIRT1468205 hsa-miR-10a CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000151 Component Ubiquitin ligase complex IBA 21873635
GO:0000151 Component Ubiquitin ligase complex TAS 8563171
GO:0000209 Process Protein polyubiquitination IBA 21873635
GO:0000209 Process Protein polyubiquitination IDA 10888878, 14765125
GO:0003713 Function Transcription coactivator activity IDA 15367689
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
603721 12488 ENSG00000185651
Protein
UniProt ID P68036
Protein name Ubiquitin-conjugating enzyme E2 L3 (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme L3) (L-UBC) (UbcH7) (Ubiquitin carrier protein L3) (Ubiquitin-conjugating enzyme E2-F1) (Ubiquitin-protein ligase L3)
Protein function Ubiquitin-conjugating enzyme E2 that specifically acts with HECT-type and RBR family E3 ubiquitin-protein ligases. Does not function with most RING-containing E3 ubiquitin-protein ligases because it lacks intrinsic E3-independent reactivity with
PDB 1C4Z , 1FBV , 3SQV , 3SY2 , 4Q5E , 4Q5H , 5HPT , 5TTE , 5UDH , 6CP2 , 6DJW , 6DJX , 6N13 , 6XXU , 7B5L , 7B5N , 7OIK , 7V8F , 8EAZ , 8EB0
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00179 UQ_con 6 144 Ubiquitin-conjugating enzyme Domain
Tissue specificity TISSUE SPECIFICITY: Ubiquitous, with highest expression in testis.
Sequence
Sequence length 154
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Ubiquitin mediated proteolysis
Parkinson disease
Pathways of neurodegeneration - multiple diseases
  Synthesis of active ubiquitin: roles of E1 and E2 enzymes
E3 ubiquitin ligases ubiquitinate target proteins
Antigen processing: Ubiquitination & Proteasome degradation
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Alzheimer disease Alzheimer`s Disease rs63750215, rs28936379, rs63749851, rs63749884, rs28936380, rs63750048, rs63750579, rs63750264, rs63749964, rs63750671, rs281865161, rs63750066, rs63750399, rs63750734, rs63751039
View all (65 more)
30805717
Arthritis Systemic onset juvenile chronic arthritis rs1594890601, rs1594882933, rs184370809, rs776489319, rs1594883470 23603761
Autoimmune diseases Autoimmune Diseases, AUTOIMMUNE DISEASE, MULTISYSTEM, INFANTILE-ONSET, 1, AUTOIMMUNE DISEASE, MULTISYSTEM, INFANTILE-ONSET, 2 rs869025224 21383967, 30595370
Inflammatory bowel disease Inflammatory Bowel Diseases rs137853579, rs137853580, rs121909601, rs149491038, rs368287711, rs387907326, rs587777338, rs758439420, rs1329427406, rs1264862631, rs1192830343, rs1373354533, rs1419560997, rs1591263883, rs1989014468 23128233, 28067908, 26192919
Unknown
Disease term Disease name Evidence References Source
Crohn disease Crohn Disease 26974007, 28067908, 21102463, 26192919 ClinVar
Celiac disease Celiac disease GWAS
Eczema Eczema GWAS
Crohn Disease Crohn Disease GWAS
Associations from Text Mining
Disease Name Relationship Type References
Adenocarcinoma of Lung Associate 37762133
Alzheimer Disease Associate 30859738
Arthritis Juvenile Associate 25540605
Arthritis Rheumatoid Associate 21068098, 22045845
Autoimmune Diseases Associate 22045845, 25640675, 27094594, 34279042
Carcinoma Hepatocellular Associate 31886256
Celiac Disease Associate 26859134, 31127932
Cerebral Infarction Associate 30859738
Drug Hypersensitivity Associate 32603359
Glomerulonephritis IGA Associate 24458077