Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7298
Gene name Gene Name - the full gene name approved by the HGNC.
Thymidylate synthetase
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
TYMS
Synonyms (NCBI Gene) Gene synonyms aliases
DKCD, HST422, TMS, TS
Chromosome Chromosome number
18
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
18p11.32
Summary Summary of gene provided in NCBI Entrez Gene.
Thymidylate synthase catalyzes the methylation of deoxyuridylate to deoxythymidylate using, 10-methylenetetrahydrofolate (methylene-THF) as a cofactor. This function maintains the dTMP (thymidine-5-prime monophosphate) pool critical for DNA replication an
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT001582 hsa-let-7b-5p pSILAC 18668040
MIRT016485 hsa-miR-193b-3p Microarray 20304954
MIRT025487 hsa-miR-34a-5p Proteomics 21566225
MIRT025487 hsa-miR-34a-5p Proteomics 21566225
MIRT029608 hsa-miR-26b-5p Microarray 19088304
Transcription factors
Transcription factor Regulation Reference
CHD8 Unknown 19255092
E2F1 Activation 14618416;9748140
E2F1 Unknown 10914714;14679120
ESR1 Unknown 10875244
SP1 Unknown 10875244;9218479
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000900 Function MRNA regulatory element binding translation repressor activity IDA 1924359
GO:0004799 Function Thymidylate synthase activity IBA
GO:0004799 Function Thymidylate synthase activity IDA 8845352, 11278511, 15093541
GO:0004799 Function Thymidylate synthase activity IEA
GO:0004799 Function Thymidylate synthase activity TAS 1924359
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
188350 12441 ENSG00000176890
Protein
UniProt ID P04818
Protein name Thymidylate synthase (TS) (TSase) (EC 2.1.1.45)
Protein function Catalyzes the reductive methylation of 2'-deoxyuridine 5'-monophosphate (dUMP) to thymidine 5'-monophosphate (dTMP), using the cosubstrate, 5,10- methylenetetrahydrofolate (CH2H4folate) as a 1-carbon donor and reductant and contributes to the de
PDB 1HVY , 1HW3 , 1HW4 , 1HZW , 1I00 , 1JU6 , 1JUJ , 1YPV , 2ONB , 2RD8 , 2RDA , 3EAW , 3EBU , 3ED7 , 3EDW , 3EF9 , 3EGY , 3EHI , 3EJL , 3GG5 , 3GH0 , 3GH2 , 3H9K , 3HB8 , 3N5E , 3N5G , 3OB7 , 4E28 , 4FGT , 4G2O , 4G6W , 4GD7 , 4GYH , 4H1I , 4JEF , 4KPW , 4O1U , 4O1X , 4UP1 , 5HS3 , 5WRN , 5X4W , 5X4X , 5X4Y , 5X5A , 5X5D , 5X5Q , 5X66 , 5X67 , 5X69 , 6OJU
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00303 Thymidylat_synt 31 313 Thymidylate synthase Domain
Sequence
Sequence length 313
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Pyrimidine metabolism
One carbon pool by folate
Metabolic pathways
Nucleotide metabolism
Antifolate resistance
Folate transport and metabolism
  Interconversion of nucleotide di- and triphosphates
G1/S-Specific Transcription
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Uterine Fibroids Uterine fibroids N/A N/A GWAS
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
Acidosis Lactic Associate 38098057
Adenocarcinoma Associate 15868929, 19460136, 21205745, 21716147, 23470290, 23803067, 25250715, 26374242, 30823845
Adenocarcinoma Mucinous Inhibit 16012177
Adenocarcinoma Mucinous Associate 20570913
Adenocarcinoma of Lung Associate 16489621, 21321092, 23350714, 27094798, 29895834, 34818974, 34996932, 36311801, 36769342
Adenoma Associate 17971770
Adenoma Pleomorphic Stimulate 26031756
Adenomatous Polyposis Coli Associate 24259968
Adrenal Cortex Neoplasms Associate 28432084
Adrenocortical Carcinoma Associate 28432084