Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7275
Gene name Gene Name - the full gene name approved by the HGNC.
TUB bipartite transcription factor
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
TUB
Synonyms (NCBI Gene) Gene synonyms aliases
RDOB, rd5
Disease Acronyms (UniProt) Disease acronyms from UniProt database
RDOB
Chromosome Chromosome number
11
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
11p15.4
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the Tubby family of bipartite transcription factors. The encoded protein may play a role in obesity and sensorineural degradation. The crystal structure has been determined for a similar protein in mouse, and it functions as
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT021923 hsa-miR-128-3p Sequencing 20371350
MIRT022311 hsa-miR-124-3p Microarray 18668037
MIRT024147 hsa-miR-221-3p Sequencing 20371350
MIRT047219 hsa-miR-181c-5p CLASH 23622248
MIRT021923 hsa-miR-128-3p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001664 Function G protein-coupled receptor binding IDA 28154160
GO:0005576 Component Extracellular region IEA
GO:0005634 Component Nucleus IDA 28154160
GO:0005737 Component Cytoplasm IDA 28154160
GO:0005829 Component Cytosol IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
601197 12406 ENSG00000166402
Protein
UniProt ID P50607
Protein name Tubby protein homolog
Protein function Functions in signal transduction from heterotrimeric G protein-coupled receptors. Binds to membranes containing phosphatidylinositol 4,5-bisphosphate. Can bind DNA (in vitro). May contribute to the regulation of transcription in the nucleus. Cou
PDB 1S31
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF16322 Tub_N 29 237 Tubby N-terminal Family
PF01167 Tub 257 501 Tub family Domain
Sequence
Sequence length 506
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Cataract Cataract rs118203965, rs118203966, rs104893685, rs121908938, rs104894175, rs121909048, rs28937573, rs121909049, rs121909050, rs74315488, rs80358200, rs80358203, rs121434643, rs56141211, rs132630322
View all (150 more)
Diabetes mellitus Diabetes Mellitus, Non-Insulin-Dependent rs587776515, rs61730328, rs606231121, rs606231122, rs79020217, rs77625743, rs78378398, rs606231123, rs1362648752, rs104893649, rs80356624, rs80356616, rs80356625, rs80356611, rs104894237
View all (293 more)
Glaucoma Glaucoma rs121918355, rs1566660365, rs1566635134, rs121918356, rs1566634475, rs28936700, rs55771538, rs28936701, rs104893622, rs55989760, rs72549387, rs104893628, rs2125316417, rs104893629, rs74315328
View all (29 more)
Hearing loss Conductive hearing loss, Sensorineural Hearing Loss (disorder) rs267607135, rs267606855, rs779841884, rs267606854, rs28942097, rs121908073, rs121908076, rs74315289, rs121908144, rs111033313, rs74315437, rs121908348, rs121908349, rs121908350, rs397515359
View all (184 more)
Unknown
Disease term Disease name Evidence References Source
Retinitis Pigmentosa retinitis pigmentosa GenCC
Tremor essential tremor GenCC
Lung adenocarcinoma Lung adenocarcinoma Validation that loss of Tgfbr2 results in more aggressive and T cell-excluded KP lung tumors GWAS, CBGDA
Associations from Text Mining
Disease Name Relationship Type References
Cataract Age Related Nuclear Associate 32337810
Ciliopathies Associate 36498982
Colonic Neoplasms Associate 36181111
Cone Dystrophy Associate 24375934
Deafness Associate 16643894
Dehydration Associate 36380055
Hearing Loss Sensorineural Associate 18183286
Insulin Resistance Associate 18183286
Leber Congenital Amaurosis Associate 16643894
Obesity Associate 16443771, 16643894, 18183286, 24375934, 33983957