Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7274
Gene name Gene Name - the full gene name approved by the HGNC.
Alpha tocopherol transfer protein
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
TTPA
Synonyms (NCBI Gene) Gene synonyms aliases
ATTP, AVED, TTP1, alphaTTP
Disease Acronyms (UniProt) Disease acronyms from UniProt database
AVED
Chromosome Chromosome number
8
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
8q12.3
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a soluble protein that binds alpha-trocopherol, a form of vitamin E, with high selectivity and affinity. This protein plays an important role in regulating vitamin E levels in the body by transporting vitamin E between membrane vesicles
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs35916840 G>A Uncertain-significance, pathogenic Coding sequence variant, missense variant
rs121917849 A>C Pathogenic Intron variant, coding sequence variant, missense variant
rs121917850 C>T Likely-pathogenic, pathogenic Missense variant, coding sequence variant
rs121917851 G>A Pathogenic-likely-pathogenic, pathogenic Intron variant, stop gained, coding sequence variant
rs143010236 C>T Likely-pathogenic, conflicting-interpretations-of-pathogenicity Intron variant, coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT024457 hsa-miR-215-5p Microarray 19074876
MIRT026314 hsa-miR-192-5p Microarray 19074876
MIRT1462520 hsa-miR-1258 CLIP-seq
MIRT1462521 hsa-miR-129-5p CLIP-seq
MIRT1462522 hsa-miR-1323 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 25416956, 32296183, 32814053
GO:0005546 Function Phosphatidylinositol-4,5-bisphosphate binding ISS
GO:0005770 Component Late endosome IBA 21873635
GO:0005829 Component Cytosol TAS
GO:0006629 Process Lipid metabolic process TAS 7887897
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
600415 12404 ENSG00000137561
Protein
UniProt ID P49638
Protein name Alpha-tocopherol transfer protein (Alpha-TTP)
Protein function Binds alpha-tocopherol, enhances its transfer between separate membranes, and stimulates its release from liver cells (PubMed:7887897). Binds both phosphatidylinositol 3,4-bisphosphate and phosphatidylinositol 4,5-bisphosphate; the resulting con
PDB 1OIP , 1OIZ , 1R5L , 5MUE , 5MUG , 6ZPD
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF03765 CRAL_TRIO_N 38 72 CRAL/TRIO, N-terminal domain Domain
PF00650 CRAL_TRIO 95 248 CRAL/TRIO domain Domain
Sequence
Sequence length 278
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Vitamin E
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Ataxia Ataxias, Hereditary rs606231134, rs119103243, rs119103244, rs119103245, rs606231135, rs119468005, rs119468006, rs387906298, rs606231138, rs606231139, rs119468008, rs387906299, rs606231292, rs1553281318, rs794727986
View all (52 more)
26981194
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Developmental regression Developmental regression rs1224421127
Diabetes mellitus Diabetes Mellitus rs587776515, rs61730328, rs606231121, rs606231122, rs79020217, rs77625743, rs78378398, rs606231123, rs1362648752, rs104893649, rs80356624, rs80356616, rs80356625, rs80356611, rs104894237
View all (293 more)
Unknown
Disease term Disease name Evidence References Source
Atherosclerosis Atherosclerosis 11095717 ClinVar
Associations from Text Mining
Disease Name Relationship Type References
Ataxia Associate 10727494, 10896705, 18458655, 34759169, 7887897
Ataxia with vitamin E deficiency Associate 14657365, 23713716, 7887897, 9463307
Carcinoma Hepatocellular Associate 27355945
Cardiomyopathies Associate 9463307
Deafness Associate 10896705
Dystonia Associate 9463307
Endometrial Neoplasms Associate 28213729
Fabry Disease Associate 14657365
Head and Neck Neoplasms Associate 9463307
Neoplasms Associate 28213729