Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
6804
Gene name Gene Name - the full gene name approved by the HGNC.
Syntaxin 1A
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
STX1A
Synonyms (NCBI Gene) Gene synonyms aliases
HPC-1, P35-1, STX1, SYN1A
Chromosome Chromosome number
7
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
7q11.23
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the syntaxin superfamily. Syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane. Syntaxins possess a single C-terminal transmembrane domain, a SNARE
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT006305 hsa-miR-34a-5p Luciferase reporter assay, Western blot 22160687
MIRT006305 hsa-miR-34a-5p Luciferase reporter assay, Western blot 22160687
MIRT006305 hsa-miR-34a-5p Luciferase reporter assay, Western blot 22160687
MIRT018783 hsa-miR-335-5p Microarray 18185580
MIRT030051 hsa-miR-26b-5p Microarray 19088304
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000149 Function SNARE binding IBA 21873635
GO:0001956 Process Positive regulation of neurotransmitter secretion IEA
GO:0005484 Function SNAP receptor activity IBA 21873635
GO:0005515 Function Protein binding IPI 10321247, 10481273, 12730201, 15459722, 19748891, 20798282, 24722188, 26635000, 32296183
GO:0005576 Component Extracellular region IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
186590 11433 ENSG00000106089
Protein
UniProt ID Q16623
Protein name Syntaxin-1A (Neuron-specific antigen HPC-1)
Protein function Plays an essential role in hormone and neurotransmitter calcium-dependent exocytosis and endocytosis (PubMed:26635000). Part of the SNARE (Soluble NSF Attachment Receptor) complex composed of SNAP25, STX1A and VAMP2 which mediates the fusion of
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00804 Syntaxin 30 227 Syntaxin Domain
PF05739 SNARE 228 280 SNARE domain Family
Tissue specificity TISSUE SPECIFICITY: [Isoform 1]: Highly expressed in embryonic spinal cord and ganglia and in adult cerebellum and cerebral cortex. {ECO:0000269|PubMed:10644452}.; TISSUE SPECIFICITY: [Isoform 2]: Expressed in heart, liver, fat, skeletal muscle, kidney an
Sequence
Sequence length 288
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  SNARE interactions in vesicular transport
Synaptic vesicle cycle
Insulin secretion
Huntington disease
Pathways of neurodegeneration - multiple diseases
Amphetamine addiction
  Serotonin Neurotransmitter Release Cycle
Norepinephrine Neurotransmitter Release Cycle
Glutamate Neurotransmitter Release Cycle
Dopamine Neurotransmitter Release Cycle
Acetylcholine Neurotransmitter Release Cycle
Other interleukin signaling
Toxicity of botulinum toxin type C (BoNT/C)
LGI-ADAM interactions
GABA synthesis, release, reuptake and degradation
Insertion of tail-anchored proteins into the endoplasmic reticulum membrane
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Autism Autistic Disorder rs121964908, rs62643608, rs181327458, rs797046134, rs869312704, rs1555013332, rs876657679, rs1057518999, rs1057518658, rs771827120, rs1555187899, rs773080572, rs753871454, rs1684130791, rs1684180699
View all (8 more)
18593506
Cystic fibrosis Cystic Fibrosis, Cystic fibrosis rs113993960, rs121908745, rs77101217, rs78655421, rs77932196, rs74551128, rs76713772, rs80055610, rs121909006, rs113993959, rs121908755, rs121908758, rs75527207, rs74597325, rs75549581
View all (694 more)
23572023
Pulmonary fibrosis Pulmonary Fibrosis rs121918666, rs199422300, rs121917834, rs199422294, rs201159197, rs199422297, rs199422305, rs751381953, rs876661305, rs878853260, rs1555811762, rs1060502990, rs1555903332, rs1554038539, rs1554042899
View all (1 more)
Schizophrenia Schizophrenia rs13447324, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346
View all (12 more)
15219469, 18512733
Unknown
Disease term Disease name Evidence References Source
Cystic Fibrosis cystic fibrosis GenCC
Neurodevelopmental Disorders complex neurodevelopmental disorder, neurodevelopmental disorder GenCC
Associations from Text Mining
Disease Name Relationship Type References
Astrocytoma Associate 12586365, 15037634
Attention Deficit Disorder with Hyperactivity Associate 22773342
Autistic Disorder Associate 18593506, 36564538
Brain Damage Chronic Associate 36008522
Brain Diseases Associate 36564538
Brain Ischemia Associate 36008522
Breast Neoplasms Associate 26673618
Carcinoma Neuroendocrine Associate 32059362
Cerebral Infarction Stimulate 36008522
Coronary Artery Disease Associate 31192914