Gene Gene information from NCBI Gene database.
Entrez ID 673
Gene name B-Raf proto-oncogene, serine/threonine kinase
Gene symbol BRAF
Synonyms (NCBI Gene)
B-RAF1B-rafBRAF-1BRAF1NS7RAFB1
Chromosome 7
Chromosome location 7q34
Summary This gene encodes a protein belonging to the RAF family of serine/threonine protein kinases. This protein plays a role in regulating the MAP kinase/ERK signaling pathway, which affects cell division, differentiation, and secretion. Mutations in this gene,
SNPs SNP information provided by dbSNP.
107
SNP ID Visualize variation Clinical significance Consequence
rs113488022 A>C,G,T Pathogenic, likely-pathogenic, uncertain-significance, other, drug-response Non coding transcript variant, intron variant, coding sequence variant, missense variant
rs121913225 A>G Likely-pathogenic Non coding transcript variant, intron variant, coding sequence variant, missense variant
rs121913226 TTT>- Likely-pathogenic Non coding transcript variant, inframe deletion, intron variant, coding sequence variant
rs121913227 AC>CT,TT Drug-response, pathogenic Non coding transcript variant, intron variant, coding sequence variant, missense variant
rs121913335 T>G Likely-pathogenic Non coding transcript variant, intron variant, coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
15
miRTarBase ID miRNA Experiments Reference
MIRT045803 hsa-miR-191-5p CLASH 23622248
MIRT043975 hsa-miR-378a-5p CLASH 23622248
MIRT037574 hsa-miR-744-5p CLASH 23622248
MIRT053218 hsa-miR-143-3p Luciferase reporter assayqRT-PCRWestern blot 23128394
MIRT053219 hsa-miR-145-5p Luciferase reporter assayqRT-PCRWestern blot 23128394
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
90
GO ID Ontology Definition Evidence Reference
GO:0000165 Process MAPK cascade IDA 18567582, 29433126
GO:0000166 Function Nucleotide binding IEA
GO:0002318 Process Myeloid progenitor cell differentiation IEA
GO:0003824 Function Catalytic activity IEA
GO:0004672 Function Protein kinase activity IDA 17563371
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
164757 1097 ENSG00000157764
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P15056
Protein name Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
Protein function Protein kinase involved in the transduction of mitogenic signals from the cell membrane to the nucleus (Probable). Phosphorylates MAP2K1, and thereby activates the MAP kinase signal transduction pathway (PubMed:21441910, PubMed:29433126). Phosph
PDB 1UWH , 1UWJ , 2FB8 , 2L05 , 3C4C , 3D4Q , 3IDP , 3II5 , 3NY5 , 3OG7 , 3PPJ , 3PPK , 3PRF , 3PRI , 3PSB , 3PSD , 3Q4C , 3Q96 , 3SKC , 3TV4 , 3TV6 , 4CQE , 4DBN , 4E26 , 4E4X , 4EHE , 4EHG , 4FC0 , 4FK3 , 4G9C , 4G9R , 4H58 , 4JVG , 4KSP , 4KSQ , 4MBJ , 4MNE , 4MNF , 4PP7 , 4R5Y , 4RZV , 4RZW , 4WO5 , 4XV1 , 4XV2 , 4XV3 , 4XV9 , 4YHT , 5C9C , 5CSW , 5CSX
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02196 RBD 156 225 Raf-like Ras-binding domain Domain
PF00130 C1_1 235 282 Phorbol esters/diacylglycerol binding domain (C1 domain) Domain
PF07714 PK_Tyr_Ser-Thr 457 714 Protein tyrosine and serine/threonine kinase Domain
Tissue specificity TISSUE SPECIFICITY: Brain and testis.
Sequence
MAALSGGGGGGAEPGQALFNGDMEPEAGAGAGAAASSAADPAIPEEVWNIKQMIKLTQEH
IEALLDKFGGEHNPPSIYLEAYEEYTSKLDALQQREQQLLESLGNGTDFSVSSSASMDTV
TSSSSSSLSVLPSSLSVFQNPTDVARSNPKSPQKPIVRVFLPNKQRTVVPARCGVTVRDS
LKKALMMRGLIPECCAVYRIQDGEKKPIGWDTDISWLTGEELHVE
VLENVPLTTHNFVRK
TFFTLAFCDFCRKLLFQGFRCQTCGYKFHQRCSTEVPLMCVN
YDQLDLLFVSKFFEHHPI
PQEEASLAETALTSGSSPSAPASDSIGPQILTSPSPSKSIPIPQPFRPADEDHRNQFGQR
DRSSSAPNVHINTIEPVNIDDLIRDQGFRGDGGSTTGLSATPPASLPGSLTNVKALQKSP
GPQRERKSSSSSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDV
AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHH
LHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV
KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN
NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI
ELLARS
LPKIHRSASEPSLNRAGFQTEDFSLYACASPKTPIQAGGYGAFPVH
Sequence length 766
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  EGFR tyrosine kinase inhibitor resistance
Endocrine resistance
MAPK signaling pathway
ErbB signaling pathway
Rap1 signaling pathway
cAMP signaling pathway
Chemokine signaling pathway
FoxO signaling pathway
mTOR signaling pathway
Vascular smooth muscle contraction
Focal adhesion
Natural killer cell mediated cytotoxicity
Long-term potentiation
Neurotrophin signaling pathway
Serotonergic synapse
Long-term depression
Regulation of actin cytoskeleton
Insulin signaling pathway
Progesterone-mediated oocyte maturation
Parathyroid hormone synthesis, secretion and action
Cushing syndrome
Alzheimer disease
Pathways of neurodegeneration - multiple diseases
Alcoholism
Hepatitis C
Hepatitis B
Pathways in cancer
Proteoglycans in cancer
Chemical carcinogenesis - reactive oxygen species
Colorectal cancer
Renal cell carcinoma
Pancreatic cancer
Endometrial cancer
Glioma
Prostate cancer
Thyroid cancer
Melanoma
Bladder cancer
Chronic myeloid leukemia
Acute myeloid leukemia
Non-small cell lung cancer
Breast cancer
Hepatocellular carcinoma
Gastric cancer
  Spry regulation of FGF signaling
Frs2-mediated activation
RAF activation
MAP2K and MAPK activation
Negative feedback regulation of MAPK pathway
Negative regulation of MAPK pathway
Signaling by moderate kinase activity BRAF mutants
Signaling by high-kinase activity BRAF mutants
Signaling by BRAF and RAF fusions
Paradoxical activation of RAF signaling by kinase inactive BRAF
Signaling downstream of RAS mutants
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
1765
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Ataxia-telangiectasia syndrome Pathogenic; Likely pathogenic rs180177036, rs121913376 RCV001849264
RCV002051798
BRAF-related disorder Pathogenic; Likely pathogenic rs180177042, rs180177035, rs180177036, rs387906660, rs397507473, rs397507483 RCV005867936
RCV004752707
RCV003415705
RCV003398558
RCV003407389
RCV005867806
Carcinoma of colon Pathogenic rs180177032, rs180177033, rs121913348, rs121913364 RCV000014995
RCV000014996
RCV000014997
RCV000014999
Cardio-facio-cutaneous syndrome Pathogenic; Likely pathogenic rs121913341, rs180177036, rs180177042, rs794729219, rs869025606, rs121913348, rs180177034, rs121913369, rs121913357, rs180177035, rs121913355, rs180177038, rs180177039, rs180177040, rs180177041
View all (27 more)
RCV000154266
RCV000844617
RCV000150199
RCV002222430
RCV000208777
RCV000844618
RCV000033285
RCV000033333
RCV001778653
RCV000208766
RCV000211748
RCV000208764
RCV000844616
RCV000211750
RCV000211751
RCV000208775
RCV000824916
RCV000824926
RCV000824925
RCV003230371
RCV000211752
RCV000037955
RCV000037956
RCV000037957
RCV000033288
RCV000824917
RCV000037917
RCV000150208
RCV000150207
RCV001814021
RCV000037924
RCV000150205
RCV000037927
RCV000208758
RCV000208774
RCV000824928
RCV000150201
RCV000037921
RCV000037922
RCV000037923
RCV000037928
RCV000037929
RCV000037939
RCV000824912
RCV000208128
RCV000824920
RCV000824918
RCV000824919
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Acute myeloid leukemia Conflicting classifications of pathogenicity rs956143558 RCV005900801
Alveolar rhabdomyosarcoma Conflicting classifications of pathogenicity rs113488022 RCV006253601
Astrocytoma, low-grade, somatic Conflicting classifications of pathogenicity rs113488022 RCV000014994
Benign metanephric tumor Conflicting classifications of pathogenicity rs113488022 RCV006253612
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Abdominal Injuries Associate 36003386
Abdominal Pain Associate 37358854
Aberrant Crypt Foci Associate 15793287, 25314065, 29222172
Abnormalities Drug Induced Associate 38066633
Absent Eyebrows and Eyelashes with Mental Retardation Associate 37697378
Accessory Atrioventricular Bundle Associate 37352472
Acromegaly Associate 25329702
ACTH Secreting Pituitary Adenoma Associate 30093687
Acute erythroleukemia Associate 30385823
Adenoameloblastoma Associate 37093491