Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene SNPs miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	6599
Gene name Gene Name - the full gene name approved by the HGNC.	SWI/SNF related BAF chromatin remodeling complex subunit C1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	SMARCC1
Synonyms (NCBI Gene) Gene synonyms aliases	BAF155, CRACC1, HYC5, Rsc8, SRG3, SWI3
Disease Acronyms (UniProt) Disease acronyms from UniProt database	HYC5
Chromosome Chromosome number	3
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	3p21.31
Summary Summary of gene provided in NCBI Entrez Gene.	The protein encoded by this gene is a member of the SWI/SNF family of proteins, whose members display helicase and ATPase activities and which are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. T

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SNP ID	Visualize variation	Clinical significance	Consequence
rs1576390243	T>-	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1576408050	->GAGTCCCCACT	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1576408057	T>G	Likely-pathogenic	Missense variant, coding sequence variant
rs1576412227	->TT	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1576426439	T>A	Likely-pathogenic	Coding sequence variant, stop gained

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miRTarBase ID	miRNA	Experiments	Reference
MIRT023740	hsa-miR-1-3p	Proteomics	18668040
MIRT025422	hsa-miR-34a-5p	Proteomics	21566225
MIRT025422	hsa-miR-34a-5p	Proteomics	21566225
MIRT027600	hsa-miR-98-5p	Microarray	19088304
MIRT032311	hsa-let-7b-5p	Proteomics	18668040
MIRT051857	hsa-let-7c-5p	CLASH	23622248
MIRT051378	hsa-let-7f-5p	CLASH	23622248
MIRT048376	hsa-miR-29b-3p	CLASH	23622248
MIRT053600	hsa-miR-320c	5.0	23799850
MIRT053600	hsa-miR-320c	5.0	23799850
MIRT666205	hsa-miR-34b-3p	HITS-CLIP	23824327
MIRT666204	hsa-miR-4705	HITS-CLIP	23824327
MIRT666203	hsa-miR-3140-5p	HITS-CLIP	23824327
MIRT666202	hsa-miR-3130-3p	HITS-CLIP	23824327
MIRT666201	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT666200	hsa-miR-570-3p	HITS-CLIP	23824327
MIRT307650	hsa-miR-544a	HITS-CLIP	23824327
MIRT307656	hsa-miR-6738-3p	HITS-CLIP	23824327
MIRT666205	hsa-miR-34b-3p	HITS-CLIP	23824327
MIRT666204	hsa-miR-4705	HITS-CLIP	23824327
MIRT666203	hsa-miR-3140-5p	HITS-CLIP	23824327
MIRT666202	hsa-miR-3130-3p	HITS-CLIP	23824327
MIRT666201	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT666200	hsa-miR-570-3p	HITS-CLIP	23824327
MIRT307650	hsa-miR-544a	HITS-CLIP	23824327
MIRT307656	hsa-miR-6738-3p	HITS-CLIP	23824327
MIRT1371688	hsa-let-7a	CLIP-seq
MIRT1371689	hsa-let-7b	CLIP-seq
MIRT1371690	hsa-let-7c	CLIP-seq
MIRT1371691	hsa-let-7d	CLIP-seq
MIRT1371692	hsa-let-7e	CLIP-seq
MIRT1371693	hsa-let-7f	CLIP-seq
MIRT1371694	hsa-let-7g	CLIP-seq
MIRT1371695	hsa-let-7i	CLIP-seq
MIRT1371696	hsa-miR-1	CLIP-seq
MIRT1371697	hsa-miR-1179	CLIP-seq
MIRT1371698	hsa-miR-1183	CLIP-seq
MIRT1371699	hsa-miR-1207-5p	CLIP-seq
MIRT1371700	hsa-miR-1245	CLIP-seq
MIRT1371701	hsa-miR-1245b-5p	CLIP-seq
MIRT1371702	hsa-miR-1248	CLIP-seq
MIRT1371703	hsa-miR-1293	CLIP-seq
MIRT1371704	hsa-miR-1295	CLIP-seq
MIRT1371705	hsa-miR-1298	CLIP-seq
MIRT1371706	hsa-miR-132	CLIP-seq
MIRT1371707	hsa-miR-136	CLIP-seq
MIRT1371708	hsa-miR-1470	CLIP-seq
MIRT1371709	hsa-miR-194	CLIP-seq
MIRT1371710	hsa-miR-196a	CLIP-seq
MIRT1371711	hsa-miR-196b	CLIP-seq
MIRT1371712	hsa-miR-206	CLIP-seq
MIRT1371713	hsa-miR-2110	CLIP-seq
MIRT1371714	hsa-miR-212	CLIP-seq
MIRT1371715	hsa-miR-23a	CLIP-seq
MIRT1371716	hsa-miR-23b	CLIP-seq
MIRT1371717	hsa-miR-23c	CLIP-seq
MIRT1371718	hsa-miR-3121-5p	CLIP-seq
MIRT1371719	hsa-miR-3122	CLIP-seq
MIRT1371720	hsa-miR-3142	CLIP-seq
MIRT1371721	hsa-miR-3144-5p	CLIP-seq
MIRT1371722	hsa-miR-3150a-3p	CLIP-seq
MIRT1371723	hsa-miR-3153	CLIP-seq
MIRT1371724	hsa-miR-3175	CLIP-seq
MIRT1371725	hsa-miR-3187-3p	CLIP-seq
MIRT1371726	hsa-miR-3191	CLIP-seq
MIRT1371727	hsa-miR-3202	CLIP-seq
MIRT1371728	hsa-miR-330-3p	CLIP-seq
MIRT1371729	hsa-miR-3609	CLIP-seq
MIRT1371730	hsa-miR-3612	CLIP-seq
MIRT1371731	hsa-miR-3613-3p	CLIP-seq
MIRT1371732	hsa-miR-3617	CLIP-seq
MIRT1371733	hsa-miR-3622a-5p	CLIP-seq
MIRT1371734	hsa-miR-3653	CLIP-seq
MIRT1371735	hsa-miR-3658	CLIP-seq
MIRT1371736	hsa-miR-3667-3p	CLIP-seq
MIRT1371737	hsa-miR-3673	CLIP-seq
MIRT1371738	hsa-miR-3692	CLIP-seq
MIRT1371739	hsa-miR-3913-5p	CLIP-seq
MIRT1371740	hsa-miR-3919	CLIP-seq
MIRT1371741	hsa-miR-410	CLIP-seq
MIRT1371742	hsa-miR-4260	CLIP-seq
MIRT1371743	hsa-miR-4279	CLIP-seq
MIRT1371744	hsa-miR-4292	CLIP-seq
MIRT1371745	hsa-miR-4308	CLIP-seq
MIRT1371746	hsa-miR-4311	CLIP-seq
MIRT1371747	hsa-miR-432	CLIP-seq
MIRT1371748	hsa-miR-4330	CLIP-seq
MIRT1371749	hsa-miR-4420	CLIP-seq
MIRT1371750	hsa-miR-4434	CLIP-seq
MIRT1371751	hsa-miR-4436b-5p	CLIP-seq
MIRT1371752	hsa-miR-4458	CLIP-seq
MIRT1371753	hsa-miR-4463	CLIP-seq
MIRT1371754	hsa-miR-4469	CLIP-seq
MIRT1371755	hsa-miR-4475	CLIP-seq
MIRT1371756	hsa-miR-4481	CLIP-seq
MIRT1371757	hsa-miR-4483	CLIP-seq
MIRT1371758	hsa-miR-4500	CLIP-seq
MIRT1371759	hsa-miR-4516	CLIP-seq
MIRT1371760	hsa-miR-4529-5p	CLIP-seq
MIRT1371761	hsa-miR-4533	CLIP-seq
MIRT1371762	hsa-miR-4633-3p	CLIP-seq
MIRT1371763	hsa-miR-4651	CLIP-seq
MIRT1371764	hsa-miR-4652-5p	CLIP-seq
MIRT1371765	hsa-miR-4667-3p	CLIP-seq
MIRT1371766	hsa-miR-4668-5p	CLIP-seq
MIRT1371767	hsa-miR-4677-3p	CLIP-seq
MIRT1371768	hsa-miR-4694-3p	CLIP-seq
MIRT1371769	hsa-miR-4695-3p	CLIP-seq
MIRT1371770	hsa-miR-4736	CLIP-seq
MIRT1371771	hsa-miR-4745-5p	CLIP-seq
MIRT1371772	hsa-miR-4756-3p	CLIP-seq
MIRT1371773	hsa-miR-4763-3p	CLIP-seq
MIRT1371774	hsa-miR-4775	CLIP-seq
MIRT1371775	hsa-miR-4778-3p	CLIP-seq
MIRT1371776	hsa-miR-4794	CLIP-seq
MIRT1371777	hsa-miR-491-5p	CLIP-seq
MIRT1371778	hsa-miR-515-5p	CLIP-seq
MIRT1371779	hsa-miR-544b	CLIP-seq
MIRT1371780	hsa-miR-548a-3p	CLIP-seq
MIRT1371781	hsa-miR-548aa	CLIP-seq
MIRT1371782	hsa-miR-548ae	CLIP-seq
MIRT1371783	hsa-miR-548ah	CLIP-seq
MIRT1371784	hsa-miR-548aj	CLIP-seq
MIRT1371785	hsa-miR-548am	CLIP-seq
MIRT1371786	hsa-miR-548e	CLIP-seq
MIRT1371787	hsa-miR-548f	CLIP-seq
MIRT1371788	hsa-miR-548p	CLIP-seq
MIRT1371789	hsa-miR-548u	CLIP-seq
MIRT1371790	hsa-miR-548x	CLIP-seq
MIRT1371791	hsa-miR-564	CLIP-seq
MIRT1371792	hsa-miR-579	CLIP-seq
MIRT1371793	hsa-miR-590-3p	CLIP-seq
MIRT1371794	hsa-miR-608	CLIP-seq
MIRT1371795	hsa-miR-613	CLIP-seq
MIRT1371796	hsa-miR-624	CLIP-seq
MIRT1371797	hsa-miR-636	CLIP-seq
MIRT1371798	hsa-miR-641	CLIP-seq
MIRT1371799	hsa-miR-650	CLIP-seq
MIRT1371800	hsa-miR-664	CLIP-seq
MIRT1371801	hsa-miR-939	CLIP-seq
MIRT1371802	hsa-miR-98	CLIP-seq
MIRT1371781	hsa-miR-548aa	CLIP-seq
MIRT1371696	hsa-miR-1	CLIP-seq
MIRT2110278	hsa-miR-154	CLIP-seq
MIRT2110279	hsa-miR-188-3p	CLIP-seq
MIRT1371712	hsa-miR-206	CLIP-seq
MIRT2110280	hsa-miR-2113	CLIP-seq
MIRT2110281	hsa-miR-214	CLIP-seq
MIRT2110282	hsa-miR-224	CLIP-seq
MIRT2110283	hsa-miR-2682	CLIP-seq
MIRT1371719	hsa-miR-3122	CLIP-seq
MIRT1371723	hsa-miR-3153	CLIP-seq
MIRT2110284	hsa-miR-3154	CLIP-seq
MIRT1371724	hsa-miR-3175	CLIP-seq
MIRT1371727	hsa-miR-3202	CLIP-seq
MIRT2110285	hsa-miR-34a	CLIP-seq
MIRT2110286	hsa-miR-34c-5p	CLIP-seq
MIRT2110287	hsa-miR-3611	CLIP-seq
MIRT1371730	hsa-miR-3612	CLIP-seq
MIRT2110288	hsa-miR-361-5p	CLIP-seq
MIRT2110289	hsa-miR-3616-5p	CLIP-seq
MIRT2110290	hsa-miR-3619-5p	CLIP-seq
MIRT2110291	hsa-miR-3647-5p	CLIP-seq
MIRT1371736	hsa-miR-3667-3p	CLIP-seq
MIRT1371737	hsa-miR-3673	CLIP-seq
MIRT1371738	hsa-miR-3692	CLIP-seq
MIRT2110292	hsa-miR-3911	CLIP-seq
MIRT1371739	hsa-miR-3913-5p	CLIP-seq
MIRT2110293	hsa-miR-3938	CLIP-seq
MIRT2110294	hsa-miR-3978	CLIP-seq
MIRT2110295	hsa-miR-4252	CLIP-seq
MIRT2110296	hsa-miR-4257	CLIP-seq
MIRT2110297	hsa-miR-4261	CLIP-seq
MIRT1371743	hsa-miR-4279	CLIP-seq
MIRT2110298	hsa-miR-4286	CLIP-seq
MIRT2110299	hsa-miR-4290	CLIP-seq
MIRT2110300	hsa-miR-4291	CLIP-seq
MIRT2110301	hsa-miR-4302	CLIP-seq
MIRT1371749	hsa-miR-4420	CLIP-seq
MIRT2110302	hsa-miR-4436a	CLIP-seq
MIRT2110303	hsa-miR-4443	CLIP-seq
MIRT1371753	hsa-miR-4463	CLIP-seq
MIRT2110304	hsa-miR-4474-3p	CLIP-seq
MIRT2110305	hsa-miR-449a	CLIP-seq
MIRT2110306	hsa-miR-449b	CLIP-seq
MIRT2110307	hsa-miR-449c	CLIP-seq
MIRT2110308	hsa-miR-4514	CLIP-seq
MIRT2110309	hsa-miR-4528	CLIP-seq
MIRT1371761	hsa-miR-4533	CLIP-seq
MIRT2110310	hsa-miR-4643	CLIP-seq
MIRT2110311	hsa-miR-4645-5p	CLIP-seq
MIRT1371766	hsa-miR-4668-5p	CLIP-seq
MIRT2110312	hsa-miR-4673	CLIP-seq
MIRT2110313	hsa-miR-4678	CLIP-seq
MIRT2110314	hsa-miR-4692	CLIP-seq
MIRT2110315	hsa-miR-4708-5p	CLIP-seq
MIRT2110316	hsa-miR-4712-5p	CLIP-seq
MIRT2110317	hsa-miR-4717-3p	CLIP-seq
MIRT2110318	hsa-miR-4719	CLIP-seq
MIRT2110319	hsa-miR-4727-5p	CLIP-seq
MIRT2110320	hsa-miR-4733-3p	CLIP-seq
MIRT2110321	hsa-miR-4755-3p	CLIP-seq
MIRT2110322	hsa-miR-4769-3p	CLIP-seq
MIRT1371774	hsa-miR-4775	CLIP-seq
MIRT2110323	hsa-miR-4795-3p	CLIP-seq
MIRT2110324	hsa-miR-4795-5p	CLIP-seq
MIRT2110325	hsa-miR-4802-3p	CLIP-seq
MIRT2110326	hsa-miR-513c	CLIP-seq
MIRT2110327	hsa-miR-514b-5p	CLIP-seq
MIRT2110328	hsa-miR-539	CLIP-seq
MIRT1371781	hsa-miR-548aa	CLIP-seq
MIRT1371789	hsa-miR-548u	CLIP-seq
MIRT2110329	hsa-miR-573	CLIP-seq
MIRT2110330	hsa-miR-580	CLIP-seq
MIRT1371793	hsa-miR-590-3p	CLIP-seq
MIRT1371795	hsa-miR-613	CLIP-seq
MIRT1371799	hsa-miR-650	CLIP-seq
MIRT2110331	hsa-miR-656	CLIP-seq
MIRT2110332	hsa-miR-761	CLIP-seq
MIRT2110333	hsa-miR-770-5p	CLIP-seq
MIRT2110334	hsa-miR-922	CLIP-seq
MIRT1371688	hsa-let-7a	CLIP-seq
MIRT1371689	hsa-let-7b	CLIP-seq
MIRT1371690	hsa-let-7c	CLIP-seq
MIRT1371691	hsa-let-7d	CLIP-seq
MIRT1371692	hsa-let-7e	CLIP-seq
MIRT1371693	hsa-let-7f	CLIP-seq
MIRT1371694	hsa-let-7g	CLIP-seq
MIRT1371695	hsa-let-7i	CLIP-seq
MIRT1371696	hsa-miR-1	CLIP-seq
MIRT1371698	hsa-miR-1183	CLIP-seq
MIRT1371699	hsa-miR-1207-5p	CLIP-seq
MIRT2333865	hsa-miR-1237	CLIP-seq
MIRT2333866	hsa-miR-124	CLIP-seq
MIRT1371702	hsa-miR-1248	CLIP-seq
MIRT2333867	hsa-miR-1256	CLIP-seq
MIRT1371703	hsa-miR-1293	CLIP-seq
MIRT2333868	hsa-miR-1299	CLIP-seq
MIRT2110278	hsa-miR-154	CLIP-seq
MIRT2333869	hsa-miR-1909	CLIP-seq
MIRT1371709	hsa-miR-194	CLIP-seq
MIRT1371710	hsa-miR-196a	CLIP-seq
MIRT1371711	hsa-miR-196b	CLIP-seq
MIRT1371712	hsa-miR-206	CLIP-seq
MIRT1371713	hsa-miR-2110	CLIP-seq
MIRT2110280	hsa-miR-2113	CLIP-seq
MIRT2110281	hsa-miR-214	CLIP-seq
MIRT2110282	hsa-miR-224	CLIP-seq
MIRT2333870	hsa-miR-2355-3p	CLIP-seq
MIRT1371715	hsa-miR-23a	CLIP-seq
MIRT1371716	hsa-miR-23b	CLIP-seq
MIRT1371717	hsa-miR-23c	CLIP-seq
MIRT2110283	hsa-miR-2682	CLIP-seq
MIRT2333871	hsa-miR-29a	CLIP-seq
MIRT2333872	hsa-miR-29b	CLIP-seq
MIRT2333873	hsa-miR-29c	CLIP-seq
MIRT2333874	hsa-miR-3065-3p	CLIP-seq
MIRT1371718	hsa-miR-3121-5p	CLIP-seq
MIRT1371719	hsa-miR-3122	CLIP-seq
MIRT1371722	hsa-miR-3150a-3p	CLIP-seq
MIRT1371723	hsa-miR-3153	CLIP-seq
MIRT1371724	hsa-miR-3175	CLIP-seq
MIRT1371725	hsa-miR-3187-3p	CLIP-seq
MIRT2110285	hsa-miR-34a	CLIP-seq
MIRT2110286	hsa-miR-34c-5p	CLIP-seq
MIRT2110287	hsa-miR-3611	CLIP-seq
MIRT1371730	hsa-miR-3612	CLIP-seq
MIRT2110288	hsa-miR-361-5p	CLIP-seq
MIRT2110289	hsa-miR-3616-5p	CLIP-seq
MIRT1371732	hsa-miR-3617	CLIP-seq
MIRT2110290	hsa-miR-3619-5p	CLIP-seq
MIRT1371733	hsa-miR-3622a-5p	CLIP-seq
MIRT2110291	hsa-miR-3647-5p	CLIP-seq
MIRT2333875	hsa-miR-3663-3p	CLIP-seq
MIRT2333876	hsa-miR-3665	CLIP-seq
MIRT2333877	hsa-miR-3670	CLIP-seq
MIRT1371737	hsa-miR-3673	CLIP-seq
MIRT2333878	hsa-miR-3679-3p	CLIP-seq
MIRT2333879	hsa-miR-3714	CLIP-seq
MIRT2333880	hsa-miR-371-5p	CLIP-seq
MIRT2333881	hsa-miR-371b-5p	CLIP-seq
MIRT2333882	hsa-miR-3909	CLIP-seq
MIRT2333883	hsa-miR-3910	CLIP-seq
MIRT2110292	hsa-miR-3911	CLIP-seq
MIRT1371739	hsa-miR-3913-5p	CLIP-seq
MIRT1371740	hsa-miR-3919	CLIP-seq
MIRT2110295	hsa-miR-4252	CLIP-seq
MIRT1371742	hsa-miR-4260	CLIP-seq
MIRT2110300	hsa-miR-4291	CLIP-seq
MIRT2333884	hsa-miR-4293	CLIP-seq
MIRT2110301	hsa-miR-4302	CLIP-seq
MIRT2333885	hsa-miR-433	CLIP-seq
MIRT2110302	hsa-miR-4436a	CLIP-seq
MIRT2110303	hsa-miR-4443	CLIP-seq
MIRT1371752	hsa-miR-4458	CLIP-seq
MIRT1371753	hsa-miR-4463	CLIP-seq
MIRT2333886	hsa-miR-4471	CLIP-seq
MIRT2110304	hsa-miR-4474-3p	CLIP-seq
MIRT1371756	hsa-miR-4481	CLIP-seq
MIRT1371757	hsa-miR-4483	CLIP-seq
MIRT2110305	hsa-miR-449a	CLIP-seq
MIRT2110306	hsa-miR-449b	CLIP-seq
MIRT2110307	hsa-miR-449c	CLIP-seq
MIRT1371758	hsa-miR-4500	CLIP-seq
MIRT2110308	hsa-miR-4514	CLIP-seq
MIRT1371760	hsa-miR-4529-5p	CLIP-seq
MIRT2333887	hsa-miR-4530	CLIP-seq
MIRT1371761	hsa-miR-4533	CLIP-seq
MIRT2110311	hsa-miR-4645-5p	CLIP-seq
MIRT2333888	hsa-miR-4650-5p	CLIP-seq
MIRT1371763	hsa-miR-4651	CLIP-seq
MIRT1371766	hsa-miR-4668-5p	CLIP-seq
MIRT2110312	hsa-miR-4673	CLIP-seq
MIRT2333889	hsa-miR-4680-5p	CLIP-seq
MIRT2333890	hsa-miR-4690-5p	CLIP-seq
MIRT2110314	hsa-miR-4692	CLIP-seq
MIRT2110315	hsa-miR-4708-5p	CLIP-seq
MIRT2110319	hsa-miR-4727-5p	CLIP-seq
MIRT2110320	hsa-miR-4733-3p	CLIP-seq
MIRT1371770	hsa-miR-4736	CLIP-seq
MIRT1371771	hsa-miR-4745-5p	CLIP-seq
MIRT2333891	hsa-miR-4747-5p	CLIP-seq
MIRT2110321	hsa-miR-4755-3p	CLIP-seq
MIRT1371772	hsa-miR-4756-3p	CLIP-seq
MIRT1371773	hsa-miR-4763-3p	CLIP-seq
MIRT2110324	hsa-miR-4795-5p	CLIP-seq
MIRT1371777	hsa-miR-491-5p	CLIP-seq
MIRT2333892	hsa-miR-506	CLIP-seq
MIRT2110326	hsa-miR-513c	CLIP-seq
MIRT2110327	hsa-miR-514b-5p	CLIP-seq
MIRT2110328	hsa-miR-539	CLIP-seq
MIRT1371781	hsa-miR-548aa	CLIP-seq
MIRT1371789	hsa-miR-548u	CLIP-seq
MIRT1371791	hsa-miR-564	CLIP-seq
MIRT2110329	hsa-miR-573	CLIP-seq
MIRT2110330	hsa-miR-580	CLIP-seq
MIRT1371794	hsa-miR-608	CLIP-seq
MIRT1371795	hsa-miR-613	CLIP-seq
MIRT1371798	hsa-miR-641	CLIP-seq
MIRT1371799	hsa-miR-650	CLIP-seq
MIRT2333893	hsa-miR-657	CLIP-seq
MIRT2333894	hsa-miR-676	CLIP-seq
MIRT2110332	hsa-miR-761	CLIP-seq
MIRT2333895	hsa-miR-767-5p	CLIP-seq
MIRT2333896	hsa-miR-875-3p	CLIP-seq
MIRT2110334	hsa-miR-922	CLIP-seq
MIRT1371801	hsa-miR-939	CLIP-seq
MIRT1371802	hsa-miR-98	CLIP-seq
MIRT1371688	hsa-let-7a	CLIP-seq
MIRT1371689	hsa-let-7b	CLIP-seq
MIRT1371690	hsa-let-7c	CLIP-seq
MIRT1371691	hsa-let-7d	CLIP-seq
MIRT1371692	hsa-let-7e	CLIP-seq
MIRT1371693	hsa-let-7f	CLIP-seq
MIRT1371694	hsa-let-7g	CLIP-seq
MIRT1371695	hsa-let-7i	CLIP-seq
MIRT2110278	hsa-miR-154	CLIP-seq
MIRT2110279	hsa-miR-188-3p	CLIP-seq
MIRT1371709	hsa-miR-194	CLIP-seq
MIRT1371710	hsa-miR-196a	CLIP-seq
MIRT1371711	hsa-miR-196b	CLIP-seq
MIRT1371713	hsa-miR-2110	CLIP-seq
MIRT1371721	hsa-miR-3144-5p	CLIP-seq
MIRT1371722	hsa-miR-3150a-3p	CLIP-seq
MIRT1371724	hsa-miR-3175	CLIP-seq
MIRT1371726	hsa-miR-3191	CLIP-seq
MIRT2333876	hsa-miR-3665	CLIP-seq
MIRT1371742	hsa-miR-4260	CLIP-seq
MIRT2110302	hsa-miR-4436a	CLIP-seq
MIRT1371752	hsa-miR-4458	CLIP-seq
MIRT1371758	hsa-miR-4500	CLIP-seq
MIRT1371764	hsa-miR-4652-5p	CLIP-seq
MIRT2110315	hsa-miR-4708-5p	CLIP-seq
MIRT2110320	hsa-miR-4733-3p	CLIP-seq
MIRT2394857	hsa-miR-532-3p	CLIP-seq
MIRT2394858	hsa-miR-548g	CLIP-seq
MIRT2394859	hsa-miR-550b	CLIP-seq
MIRT2333893	hsa-miR-657	CLIP-seq
MIRT1371802	hsa-miR-98	CLIP-seq
MIRT2333865	hsa-miR-1237	CLIP-seq
MIRT1371702	hsa-miR-1248	CLIP-seq
MIRT2333865	hsa-miR-1237	CLIP-seq
MIRT1371702	hsa-miR-1248	CLIP-seq
MIRT2333875	hsa-miR-3663-3p	CLIP-seq
MIRT2333884	hsa-miR-4293	CLIP-seq
MIRT1371688	hsa-let-7a	CLIP-seq
MIRT1371689	hsa-let-7b	CLIP-seq
MIRT1371690	hsa-let-7c	CLIP-seq
MIRT1371691	hsa-let-7d	CLIP-seq
MIRT1371692	hsa-let-7e	CLIP-seq
MIRT1371693	hsa-let-7f	CLIP-seq
MIRT1371694	hsa-let-7g	CLIP-seq
MIRT1371695	hsa-let-7i	CLIP-seq
MIRT1371696	hsa-miR-1	CLIP-seq
MIRT2628088	hsa-miR-10a	CLIP-seq
MIRT2628089	hsa-miR-10b	CLIP-seq
MIRT2628090	hsa-miR-140-3p	CLIP-seq
MIRT2628091	hsa-miR-153	CLIP-seq
MIRT2628092	hsa-miR-1913	CLIP-seq
MIRT1371709	hsa-miR-194	CLIP-seq
MIRT1371710	hsa-miR-196a	CLIP-seq
MIRT1371711	hsa-miR-196b	CLIP-seq
MIRT1371712	hsa-miR-206	CLIP-seq
MIRT1371713	hsa-miR-2110	CLIP-seq
MIRT2110281	hsa-miR-214	CLIP-seq
MIRT1371715	hsa-miR-23a	CLIP-seq
MIRT1371716	hsa-miR-23b	CLIP-seq
MIRT1371717	hsa-miR-23c	CLIP-seq
MIRT2628093	hsa-miR-3135	CLIP-seq
MIRT1371721	hsa-miR-3144-5p	CLIP-seq
MIRT1371722	hsa-miR-3150a-3p	CLIP-seq
MIRT2628094	hsa-miR-3174	CLIP-seq
MIRT1371726	hsa-miR-3191	CLIP-seq
MIRT1371727	hsa-miR-3202	CLIP-seq
MIRT2628095	hsa-miR-324-3p	CLIP-seq
MIRT2110287	hsa-miR-3611	CLIP-seq
MIRT2628096	hsa-miR-361-3p	CLIP-seq
MIRT2110289	hsa-miR-3616-5p	CLIP-seq
MIRT2110290	hsa-miR-3619-5p	CLIP-seq
MIRT2110291	hsa-miR-3647-5p	CLIP-seq
MIRT2333875	hsa-miR-3663-3p	CLIP-seq
MIRT1371737	hsa-miR-3673	CLIP-seq
MIRT2628097	hsa-miR-3689a-5p	CLIP-seq
MIRT2628098	hsa-miR-3689b	CLIP-seq
MIRT2628099	hsa-miR-3689e	CLIP-seq
MIRT2628100	hsa-miR-3689f	CLIP-seq
MIRT2110294	hsa-miR-3978	CLIP-seq
MIRT2110295	hsa-miR-4252	CLIP-seq
MIRT1371742	hsa-miR-4260	CLIP-seq
MIRT2110297	hsa-miR-4261	CLIP-seq
MIRT2333884	hsa-miR-4293	CLIP-seq
MIRT2628101	hsa-miR-4310	CLIP-seq
MIRT2628102	hsa-miR-4313	CLIP-seq
MIRT1371748	hsa-miR-4330	CLIP-seq
MIRT1371750	hsa-miR-4434	CLIP-seq
MIRT1371752	hsa-miR-4458	CLIP-seq
MIRT1371755	hsa-miR-4475	CLIP-seq
MIRT2628103	hsa-miR-4480	CLIP-seq
MIRT1371758	hsa-miR-4500	CLIP-seq
MIRT1371759	hsa-miR-4516	CLIP-seq
MIRT2333887	hsa-miR-4530	CLIP-seq
MIRT1371761	hsa-miR-4533	CLIP-seq
MIRT2628104	hsa-miR-4640-3p	CLIP-seq
MIRT2333888	hsa-miR-4650-5p	CLIP-seq
MIRT1371764	hsa-miR-4652-5p	CLIP-seq
MIRT2628105	hsa-miR-4679	CLIP-seq
MIRT2333890	hsa-miR-4690-5p	CLIP-seq
MIRT1371768	hsa-miR-4694-3p	CLIP-seq
MIRT1371769	hsa-miR-4695-3p	CLIP-seq
MIRT2628106	hsa-miR-4753-3p	CLIP-seq
MIRT2110321	hsa-miR-4755-3p	CLIP-seq
MIRT2110324	hsa-miR-4795-5p	CLIP-seq
MIRT2628107	hsa-miR-502-5p	CLIP-seq
MIRT2110328	hsa-miR-539	CLIP-seq
MIRT1371779	hsa-miR-544b	CLIP-seq
MIRT1371781	hsa-miR-548aa	CLIP-seq
MIRT1371789	hsa-miR-548u	CLIP-seq
MIRT2628108	hsa-miR-570	CLIP-seq
MIRT2110329	hsa-miR-573	CLIP-seq
MIRT2110330	hsa-miR-580	CLIP-seq
MIRT1371795	hsa-miR-613	CLIP-seq
MIRT1371796	hsa-miR-624	CLIP-seq
MIRT2110332	hsa-miR-761	CLIP-seq
MIRT1371802	hsa-miR-98	CLIP-seq
MIRT1371688	hsa-let-7a	CLIP-seq
MIRT1371689	hsa-let-7b	CLIP-seq
MIRT1371690	hsa-let-7c	CLIP-seq
MIRT1371691	hsa-let-7d	CLIP-seq
MIRT1371692	hsa-let-7e	CLIP-seq
MIRT1371693	hsa-let-7f	CLIP-seq
MIRT1371694	hsa-let-7g	CLIP-seq
MIRT1371695	hsa-let-7i	CLIP-seq
MIRT1371696	hsa-miR-1	CLIP-seq
MIRT2628088	hsa-miR-10a	CLIP-seq
MIRT2628089	hsa-miR-10b	CLIP-seq
MIRT2691431	hsa-miR-1224-5p	CLIP-seq
MIRT2628091	hsa-miR-153	CLIP-seq
MIRT2628092	hsa-miR-1913	CLIP-seq
MIRT1371709	hsa-miR-194	CLIP-seq
MIRT1371710	hsa-miR-196a	CLIP-seq
MIRT1371711	hsa-miR-196b	CLIP-seq
MIRT1371712	hsa-miR-206	CLIP-seq
MIRT1371713	hsa-miR-2110	CLIP-seq
MIRT2110281	hsa-miR-214	CLIP-seq
MIRT2691432	hsa-miR-28-5p	CLIP-seq
MIRT2691433	hsa-miR-3127-3p	CLIP-seq
MIRT2628093	hsa-miR-3135	CLIP-seq
MIRT2691434	hsa-miR-3139	CLIP-seq
MIRT1371721	hsa-miR-3144-5p	CLIP-seq
MIRT1371722	hsa-miR-3150a-3p	CLIP-seq
MIRT2691435	hsa-miR-3173-3p	CLIP-seq
MIRT2628094	hsa-miR-3174	CLIP-seq
MIRT1371726	hsa-miR-3191	CLIP-seq
MIRT1371727	hsa-miR-3202	CLIP-seq
MIRT2628095	hsa-miR-324-3p	CLIP-seq
MIRT2110287	hsa-miR-3611	CLIP-seq
MIRT2628096	hsa-miR-361-3p	CLIP-seq
MIRT2110289	hsa-miR-3616-5p	CLIP-seq
MIRT2110290	hsa-miR-3619-5p	CLIP-seq
MIRT2110291	hsa-miR-3647-5p	CLIP-seq
MIRT2691436	hsa-miR-3659	CLIP-seq
MIRT2333875	hsa-miR-3663-3p	CLIP-seq
MIRT1371737	hsa-miR-3673	CLIP-seq
MIRT2333878	hsa-miR-3679-3p	CLIP-seq
MIRT2628097	hsa-miR-3689a-5p	CLIP-seq
MIRT2628098	hsa-miR-3689b	CLIP-seq
MIRT2628099	hsa-miR-3689e	CLIP-seq
MIRT2628100	hsa-miR-3689f	CLIP-seq
MIRT2110295	hsa-miR-4252	CLIP-seq
MIRT1371742	hsa-miR-4260	CLIP-seq
MIRT2333884	hsa-miR-4293	CLIP-seq
MIRT2628101	hsa-miR-4310	CLIP-seq
MIRT2628102	hsa-miR-4313	CLIP-seq
MIRT2333885	hsa-miR-433	CLIP-seq
MIRT1371748	hsa-miR-4330	CLIP-seq
MIRT2691437	hsa-miR-4428	CLIP-seq
MIRT1371750	hsa-miR-4434	CLIP-seq
MIRT1371752	hsa-miR-4458	CLIP-seq
MIRT2628103	hsa-miR-4480	CLIP-seq
MIRT1371758	hsa-miR-4500	CLIP-seq
MIRT1371759	hsa-miR-4516	CLIP-seq
MIRT2333887	hsa-miR-4530	CLIP-seq
MIRT1371761	hsa-miR-4533	CLIP-seq
MIRT2628104	hsa-miR-4640-3p	CLIP-seq
MIRT2333888	hsa-miR-4650-5p	CLIP-seq
MIRT1371764	hsa-miR-4652-5p	CLIP-seq
MIRT2691438	hsa-miR-4658	CLIP-seq
MIRT2628105	hsa-miR-4679	CLIP-seq
MIRT2333890	hsa-miR-4690-5p	CLIP-seq
MIRT1371768	hsa-miR-4694-3p	CLIP-seq
MIRT1371769	hsa-miR-4695-3p	CLIP-seq
MIRT2333891	hsa-miR-4747-5p	CLIP-seq
MIRT2691439	hsa-miR-4751	CLIP-seq
MIRT2628106	hsa-miR-4753-3p	CLIP-seq
MIRT2110321	hsa-miR-4755-3p	CLIP-seq
MIRT2691440	hsa-miR-4758-5p	CLIP-seq
MIRT2691441	hsa-miR-4780	CLIP-seq
MIRT2110324	hsa-miR-4795-5p	CLIP-seq
MIRT2628107	hsa-miR-502-5p	CLIP-seq
MIRT2110328	hsa-miR-539	CLIP-seq
MIRT1371781	hsa-miR-548aa	CLIP-seq
MIRT2691442	hsa-miR-552	CLIP-seq
MIRT2691443	hsa-miR-556-5p	CLIP-seq
MIRT2628108	hsa-miR-570	CLIP-seq
MIRT2110329	hsa-miR-573	CLIP-seq
MIRT2691444	hsa-miR-574-5p	CLIP-seq
MIRT2110330	hsa-miR-580	CLIP-seq
MIRT1371795	hsa-miR-613	CLIP-seq
MIRT2691445	hsa-miR-647	CLIP-seq
MIRT2691446	hsa-miR-668	CLIP-seq
MIRT2691447	hsa-miR-708	CLIP-seq
MIRT2691448	hsa-miR-711	CLIP-seq
MIRT2110332	hsa-miR-761	CLIP-seq
MIRT1371802	hsa-miR-98	CLIP-seq

Show/Hide all(31)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000785	Component	Chromatin	HDA	16217013
GO:0001741	Component	XY body	IEA
GO:0003713	Function	Transcription coactivator activity	NAS	8804307
GO:0005515	Function	Protein binding	IPI	9891079, 10078207, 11238380, 12368262, 12917342, 15985610, 18303029, 20111005, 23540691, 24421395, 24434208, 24981860, 25416956, 28420882, 28533407, 28753627, 31759698, 32296183
GO:0005634	Component	Nucleus	IDA	28753627
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005737	Component	Cytoplasm	IDA	28753627
GO:0006337	Process	Nucleosome disassembly	IDA	8895581
GO:0006338	Process	Chromatin remodeling	IDA	10078207, 11018012, 11726552
GO:0006357	Process	Regulation of transcription by RNA polymerase II	NAS	8804307
GO:0007399	Process	Nervous system development	IEA
GO:0008286	Process	Insulin receptor signaling pathway	IEA
GO:0009887	Process	Animal organ morphogenesis	IEA
GO:0016514	Component	SWI/SNF complex	IBA	21873635
GO:0016514	Component	SWI/SNF complex	IDA	8804307, 10078207, 11078522, 29374058
GO:0030850	Process	Prostate gland development	IEA
GO:0031492	Function	Nucleosomal DNA binding	HDA	16217013
GO:0032435	Process	Negative regulation of proteasomal ubiquitin-dependent protein catabolic process	IEA
GO:0032991	Component	Protein-containing complex	HDA	16217013
GO:0042393	Function	Histone binding	IBA	21873635
GO:0043044	Process	ATP-dependent chromatin remodeling	HDA	16217013
GO:0043044	Process	ATP-dependent chromatin remodeling	IBA	21873635
GO:0045893	Process	Positive regulation of transcription, DNA-templated	IBA	21873635
GO:0045893	Process	Positive regulation of transcription, DNA-templated	IDA	11018012
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	IEA
GO:0047485	Function	Protein N-terminus binding	IPI	12917342
GO:0071564	Component	NpBAF complex	IBA	21873635
GO:0071564	Component	NpBAF complex	ISS
GO:0071565	Component	NBAF complex	IBA	21873635
GO:0071565	Component	NBAF complex	ISS

MIM	HGNC	e!Ensembl
601732	11104	ENSG00000173473

Protein

UniProt ID

Q92922

Protein name

SWI/SNF complex subunit SMARCC1 (BRG1-associated factor 155) (BAF155) (SWI/SNF complex 155 kDa subunit) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 1)

Protein function

Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Component of SWI/SNF chromatin remodeling complexes that carry out key enzymatic activities, changing chromati

PDB

2YUS , 5GJK , 6KZ7 , 6YXO , 6YXP

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF16496	SWIRM-assoc_2	32 → 445	SWIRM-associated domain at the N-terminal	Family
PF04433	SWIRM	452 → 537	SWIRM domain	Domain
PF00249	Myb_DNA-binding	620 → 665	Myb-like DNA-binding domain	Domain
PF16498	SWIRM-assoc_3	706 → 772	SWIRM-associated domain at the C-terminal	Family
PF16495	SWIRM-assoc_1	871 → 954	SWIRM-associated region 1	Family

Tissue specificity

TISSUE SPECIFICITY: Expressed in brain, heart, muscle, placenta, lung, liver, muscle, kidney and pancreas.

Sequence

MAAAAGGGGPGTAVGATGSGIAAAAAGLAVYRRKDGGPATKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGALCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEWLRPVMRKEKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDSENTPVKGGTVADLDEQDEETVTAGG
KEDEDPAKGDQSRSVDLGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPVDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
MEADPDGQQPEKAENKVENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKE
LTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMMPGQHMPGRMIPTVAANIHPSGSGPTPPGMPPMPGNILGPRVPLTAPNGMYPPPPQQ
QPPPPPPADGVPPPPAPGPPASAAP

Sequence length

1105

Interactions

View interactions

	KEGG		Reactome
	ATP-dependent chromatin remodeling Thermogenesis Hepatocellular carcinoma		RMTs methylate histone arginines RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known

Show/Hide Causal Diseases (4)

Disease term	Disease name	dbSNP ID	References
Causal
Adenocarcinoma	Adenocarcinoma, Adenocarcinoma, Basal Cell, Adenocarcinoma, Oxyphilic, Adenocarcinoma, Tubular	rs121913530, rs886039394, rs121913474	21552421
Carcinoma	Carcinoma, Cribriform, Carcinoma, Granular Cell	rs121912654, rs555607708, rs786202962, rs1564055259	21552421
Lung adenocarcinoma	Adenocarcinoma of lung (disorder)	rs28934576, rs121913530, rs397516975, rs587776805, rs121913469, rs121913364, rs121913351, rs121913366, rs397516896, rs397516977, rs397516981, rs397517127, rs121913344, rs727504233, rs121913370 View all (5 more)	27602772
Lung cancer	Malignant neoplasm of lung	rs121913530, rs121913529, rs878855122, rs1057519784, rs770315135	21552421

Show/Hide Unknown Diseases (4)

Disease term	Disease name	Source
Unknown
Hydrocephalus	hydrocephalus, congenital, 5, susceptibility to	GenCC
Diabetes	Diabetes	GWAS
Dementia	Dementia	GWAS
Alzheimer disease	Alzheimer disease	GWAS

Show/Hide Text Mining Associations (26)

Disease Name	Relationship Type	References
Associations from Text Mining
Anemia Aplastic	Associate	29596882
Arthritis Rheumatoid	Associate	36800290
Carcinogenesis	Associate	31533543
Carcinoma Hepatocellular	Inhibit	31533543
Coffin Siris syndrome	Associate	34906496
Colorectal Neoplasms	Associate	19156145
Esophageal Squamous Cell Carcinoma	Associate	26812616
Hand Foot and Mouth Disease	Associate	33574876
Heart Diseases	Associate	32037394, 38128548
Hydrocephalus	Associate	29983323, 38128548
Hypoplastic Left Heart Syndrome	Associate	32037394
Inflammation	Associate	36800290
Leukemia Myeloid Acute	Associate	29483235
Mesothelioma Malignant	Associate	27834213
Neoplasm Metastasis	Associate	23874428
Neoplasms	Associate	19156145, 31427792, 33953332, 37186134, 9693044
Neoplasms	Inhibit	22139574
Neuroblastoma	Associate	37186134
Ovarian Neoplasms	Inhibit	22139574
Pancreatic Neoplasms	Associate	23799850
Primary Ovarian Insufficiency	Associate	24939957
Prostatic Neoplasms	Associate	33323379
Prostatic Neoplasms Castration Resistant	Associate	33323379
Retinal Dysplasia	Associate	18248679
Urinary Bladder Neoplasms	Inhibit	32073734
Uterine Cervical Dysplasia	Associate	18248679

SMARCC1 (SWI/SNF related BAF chromatin remodeling complex subunit C1)