Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
65018
Gene name Gene Name - the full gene name approved by the HGNC.
PTEN induced kinase 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
PINK1
Synonyms (NCBI Gene) Gene synonyms aliases
BRPK, PARK6
Chromosome Chromosome number
1
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
1p36.12
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a serine/threonine protein kinase that localizes to mitochondria. It is thought to protect cells from stress-induced mitochondrial dysfunction. Mutations in this gene cause one form of autosomal recessive early-onset Parkinson disease. [
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs45604240 C>T Uncertain-significance, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs74315357 C>A,T Pathogenic Stop gained, coding sequence variant, synonymous variant
rs74315360 C>A Pathogenic Missense variant, coding sequence variant
rs756677845 G>- Pathogenic Frameshift variant, coding sequence variant
rs756783990 C>A Pathogenic Coding sequence variant, stop gained
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT1235378 hsa-miR-2116 CLIP-seq
MIRT1235379 hsa-miR-3605-5p CLIP-seq
MIRT1235380 hsa-miR-4659a-5p CLIP-seq
MIRT1235381 hsa-miR-4659b-5p CLIP-seq
MIRT1235382 hsa-miR-4677-5p CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0000287 Function Magnesium ion binding IDA 14607334
GO:0000287 Function Magnesium ion binding IEA
GO:0000422 Process Autophagy of mitochondrion IBA
GO:0000422 Process Autophagy of mitochondrion IMP 20798600, 23933751, 24896179
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
608309 14581 ENSG00000158828
Protein
UniProt ID Q9BXM7
Protein name Serine/threonine-protein kinase PINK1, mitochondrial (EC 2.7.11.1) (BRPK) (PTEN-induced putative kinase protein 1)
Protein function Serine/threonine-protein kinase which acts as a sensor of mitochondrial damage and protects against mitochondrial dysfunction during cellular stress. It phosphorylates mitochondrial proteins to coordinate mitochondrial quality control mechanisms
PDB 9EIH , 9EII , 9EIJ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00069 Pkinase 264 509 Protein kinase domain Domain
Tissue specificity TISSUE SPECIFICITY: Highly expressed in heart, skeletal muscle and testis, and at lower levels in brain, placenta, liver, kidney, pancreas, prostate, ovary and small intestine. Present in the embryonic testis from an early stage of development. {ECO:00002
Sequence
MAVRQALGRGLQLGRALLLRFTGKPGRAYGLGRPGPAAGCVRGERPGWAAGPGAEPRRVG
LGLPNRLRFFRQSVAGLAARLQRQFVVRAWGCAGPCGRAVFLAFGLGLGLIEEKQAESRR
AVSACQEIQAIFTQKSKPGPDPLDTRRLQGFRLEEYLIGQSIGKGCSAAVYEATMPTLPQ
NLEVTKSTGLLPGRGPGTSAPGEGQERAPGAPAFPLAIKMMWNISAGSSSEAILNTMSQE
LVPASRVALAGEYGAVTYRKSKRGPKQLAPHPNIIRVLRAFTSSVPLLPGALVDYPDVLP
SRLHPEGLGHGRTLFLVMKNYPCTLRQYLCVNTPSPRLAAMMLLQLLEGVDHLVQQGIAH
RDLKSDNILVELDPDGCPWLVIADFGCCLADESIGLQLPFSSWYVDRGGNGCLMAPEVST
ARPGPRAVIDYSKADAWAVGAIAYEIFGLVNPFYGQGKAHLESRSYQEAQLPALPESVPP
DVRQLVRALLQREASKRPSARVAANVLHL
SLWGEHILALKNLKLDKMVGWLLQQSAATLL
ANRLTEKCCVETKMKMLFLANLECETLCQAALLLCSWRAAL
Sequence length 581
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Mitophagy - animal
Parkinson disease
Amyotrophic lateral sclerosis
Pathways of neurodegeneration - multiple diseases
  Pink/Parkin Mediated Mitophagy
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Causal Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
Disease merge term Disease name dbSNP ID References
Parkinson disease Autosomal recessive early-onset Parkinson disease 6, Parkinson disease, autosomal recessive early-onset, digenic, PINK1/DJ1 rs750664040, rs755000580, rs74315359, rs74315360, rs45539432, rs119451946, rs74315355, rs756677845, rs28940284, rs34208370, rs74315356, rs1557561340, rs74315357, rs777160388, rs28940285
View all (3 more)
N/A
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
Acute Kidney Injury Associate 33494815
Adenocarcinoma Associate 29937472, 34252349
Adenocarcinoma of Lung Associate 29937472, 40243539
Adrenocortical Carcinoma Associate 30770352
Affective Disorders Psychotic Associate 17202228
Aggressive Periodontitis Associate 29995846
Alzheimer Disease Associate 21145388, 26721933, 29091718, 33998543
Alzheimer's disease without Neurofibrillary tangles Associate 25899925
Amyotrophic Lateral Sclerosis Associate 26365381, 32779864, 36379251
Attention Deficit Disorder with Hyperactivity Associate 29413154