Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
6401
Gene name Gene Name - the full gene name approved by the HGNC.
Selectin E
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
SELE
Synonyms (NCBI Gene) Gene synonyms aliases
CD62E, ELAM, ELAM1, ESEL, LECAM2, selectin-e
Chromosome Chromosome number
1
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
1q24.2
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is found in cytokine-stimulated endothelial cells and is thought to be responsible for the accumulation of blood leukocytes at sites of inflammation by mediating the adhesion of cells to the vascular lining. It exhibits st
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT004019 hsa-miR-31-5p Immunocytochemistry, Northern blot, qRT-PCR, Western blot 19949084
MIRT005711 hsa-miR-17-5p Luciferase reporter assay 19949084
MIRT005712 hsa-miR-17-3p Luciferase reporter assay 19949084
MIRT005713 hsa-miR-155-5p Luciferase reporter assay 19949084
MIRT005714 hsa-miR-221-3p Luciferase reporter assay 19949084
Transcription factors
Transcription factor Regulation Reference
ATF3 Repression 10964678
HOXA9 Unknown 22269951
NFKB1 Activation 10946302;12408953;12885753;19422386
NFKB1 Unknown 8878392
REL Activation 12408953
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0002092 Process Positive regulation of receptor internalization IDA 9312078
GO:0002523 Process Leukocyte migration involved in inflammatory response TAS 18029551
GO:0004888 Function Transmembrane signaling receptor activity IMP 12960351
GO:0005515 Function Protein binding IPI 18606703, 32814053
GO:0005615 Component Extracellular space IDA 9290466
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
131210 10718 ENSG00000007908
Protein
UniProt ID P16581
Protein name E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
Protein function Cell-surface glycoprotein having a role in immunoadhesion. Mediates in the adhesion of blood neutrophils in cytokine-activated endothelium through interaction with SELPLG/PSGL1. May have a role in capillary morphogenesis. {ECO:0000269|PubMed:168
PDB 1ESL , 1G1T , 4C16 , 4CSY , 6EYI , 6EYJ , 6EYK , 8R5L , 8R5M
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00059 Lectin_C 29 140 Lectin C-type domain Domain
PF00008 EGF 143 173 EGF-like domain Domain
PF00084 Sushi 180 237 Sushi repeat (SCR repeat) Domain
PF00084 Sushi 242 299 Sushi repeat (SCR repeat) Domain
PF00084 Sushi 304 362 Sushi repeat (SCR repeat) Domain
PF00084 Sushi 367 425 Sushi repeat (SCR repeat) Domain
PF00084 Sushi 430 488 Sushi repeat (SCR repeat) Domain
PF00084 Sushi 493 547 Sushi repeat (SCR repeat) Domain
Sequence
Sequence length 610
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Cell adhesion molecules
TNF signaling pathway
AGE-RAGE signaling pathway in diabetic complications
African trypanosomiasis
Malaria
Lipid and atherosclerosis
Fluid shear stress and atherosclerosis
  Cell surface interactions at the vascular wall
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Atrial fibrillation Atrial Fibrillation rs120074192, rs121908590, rs121908593, rs121434558, rs587776851, rs387906612, rs387906613, rs387906614, rs387906615, rs199472687, rs199472705, rs199473324, rs587777336, rs587777339, rs587777557
View all (6 more)
17890461
Dermatitis Dermatitis, Atopic, Dermatitis, Allergic Contact rs61816761, rs150597413, rs138726443, rs201356558, rs149484917, rs372754256, rs747301529, rs567795279, rs745915174 12410700, 17597826
Hypercholesterolemia Hypercholesterolemia rs28942111, rs28942112, rs137852912, rs121908025, rs28942082, rs28942083, rs121908028, rs121908030, rs28942079, rs28942084, rs121908032, rs387906302, rs387906303, rs121908033, rs121908034
View all (1161 more)
14602771
Multiple sclerosis Multiple Sclerosis, Multiple Sclerosis, Acute Fulminating rs104895219, rs483353022, rs483353023, rs483353028, rs483353029, rs483353024, rs483353030, rs3207617, rs483353031, rs483353032, rs483353033, rs483353034, rs483353035, rs483353036, rs483353039
View all (4 more)
20175758
Unknown
Disease term Disease name Evidence References Source
Paroxysmal atrial fibrillation Paroxysmal atrial fibrillation 17890461 ClinVar
Associations from Text Mining
Disease Name Relationship Type References
Acidosis Stimulate 22110680
Acrodermatitis Associate 12839559
Acute Coronary Syndrome Associate 18441195, 25147432, 29962384
Acute Kidney Injury Associate 16501492
Adenoma Associate 11231628, 12714632
Albuminuria Stimulate 31023084
Allergic Fungal Sinusitis Associate 24995349
Alopecia universalis Associate 7511865
Amyotrophic Lateral Sclerosis Associate 11054140, 18513389
Anemia Sickle Cell Stimulate 24551209