Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
63916
Gene name Gene Name - the full gene name approved by the HGNC.
Engulfment and cell motility 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ELMO2
Synonyms (NCBI Gene) Gene synonyms aliases
CED-12, CED12, Ced-12A, ELMO-2, VMPI
Disease Acronyms (UniProt) Disease acronyms from UniProt database
VMPI
Chromosome Chromosome number
20
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
20q13.12
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene interacts with the dedicator of cyto-kinesis 1 protein. Similarity to a C. elegans protein suggests that this protein may function in phagocytosis of apoptotic cells and in cell migration. Alternative splicing results in m
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs768410753 C>T Pathogenic Splice donor variant
rs886037918 C>G Pathogenic Splice acceptor variant
rs886037919 G>- Pathogenic Coding sequence variant, frameshift variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT016514 hsa-miR-193b-3p Microarray 20304954
MIRT016635 hsa-miR-429 Reporter assay 20005803
MIRT020346 hsa-miR-200a-3p Reporter assay 20005803
MIRT021068 hsa-miR-200c-3p Reporter assay 20005803
MIRT021653 hsa-miR-141-3p Reporter assay 20005803
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 20679435, 24567399, 32296183
GO:0005829 Component Cytosol IDA 20679435
GO:0005829 Component Cytosol TAS
GO:0006915 Process Apoptotic process IEA
GO:0007015 Process Actin filament organization IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
606421 17233 ENSG00000062598
Protein
UniProt ID Q96JJ3
Protein name Engulfment and cell motility protein 2 (Protein ced-12 homolog A) (hCed-12A)
Protein function Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in association with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May en
PDB 6IDX , 6IE1
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF11841 DUF3361 115 272 Domain of unknown function (DUF3361) Family
PF04727 ELMO_CED12 295 474 ELMO/CED-12 family Family
PF16457 PH_12 541 667 Pleckstrin homology domain Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed, with a higher expression in skeletal muscle, kidney and placenta. {ECO:0000269|PubMed:11595183}.
Sequence
Sequence length 720
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Bacterial invasion of epithelial cells
Shigellosis
Salmonella infection
Yersinia infection
  Regulation of actin dynamics for phagocytic cup formation
VEGFA-VEGFR2 Pathway
PTK6 Regulates RHO GTPases, RAS GTPase and MAP kinases
FCGR3A-mediated phagocytosis
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Diabetes mellitus Diabetes Mellitus rs587776515, rs61730328, rs606231121, rs606231122, rs79020217, rs77625743, rs78378398, rs606231123, rs1362648752, rs104893649, rs80356624, rs80356616, rs80356625, rs80356611, rs104894237
View all (293 more)
Hearing loss Conductive hearing loss, Sensorineural Hearing Loss (disorder) rs267607135, rs267606855, rs779841884, rs267606854, rs28942097, rs121908073, rs121908076, rs74315289, rs121908144, rs111033313, rs74315437, rs121908348, rs121908349, rs121908350, rs397515359
View all (184 more)
Mental retardation Intellectual Disability rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
Intraosseous venous malformation Primary intraosseous venous malformation rs768410753, rs886037918, rs886037919, rs1568748859
Unknown
Disease term Disease name Evidence References Source
Ramon Syndrome Ramon syndrome GenCC
Intraosseous Venous Malformation primary intraosseous venous malformation GenCC
Associations from Text Mining
Disease Name Relationship Type References
Breast Neoplasms Associate 25332238
Diabetes Mellitus Type 2 Associate 18602983
Esophageal Neoplasms Inhibit 32164040
Esophageal Squamous Cell Carcinoma Inhibit 32164040
Glioblastoma Associate 30108175
Kidney Failure Chronic Associate 18602983
Neoplasms Associate 29495584, 30108175
Neoplasms Inhibit 32164040
Ramon Syndrome Associate 39201553