Gene Gene information from NCBI Gene database.
Entrez ID 63901
Gene name FAM111 trypsin like peptidase A
Gene symbol FAM111A
Synonyms (NCBI Gene)
GCLEBKCS2
Chromosome 11
Chromosome location 11q12.1
Summary The protein encoded by this gene is cell-cycle regulated, and has nuclear localization. The C-terminal half of the protein shares homology with trypsin-like peptidases and it contains a PCNA-interacting peptide (PIP) box, that is necessary for its co-loca
SNPs SNP information provided by dbSNP.
6
SNP ID Visualize variation Clinical significance Consequence
rs587777011 G>A Pathogenic, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs587777012 T>C Conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs587777013 A>G,T Pathogenic-likely-pathogenic Coding sequence variant, missense variant
rs587777014 A>G Pathogenic-likely-pathogenic Coding sequence variant, missense variant
rs587777015 C>A,G Pathogenic-likely-pathogenic Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
286
miRTarBase ID miRNA Experiments Reference
MIRT016290 hsa-miR-193b-3p Microarray 20304954
MIRT977194 hsa-miR-1183 CLIP-seq
MIRT977195 hsa-miR-1273f CLIP-seq
MIRT977196 hsa-miR-143 CLIP-seq
MIRT977197 hsa-miR-3074-5p CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
27
GO ID Ontology Definition Evidence Reference
GO:0000785 Component Chromatin IBA
GO:0000785 Component Chromatin IDA 24561620
GO:0001650 Component Fibrillar center IDA
GO:0003677 Function DNA binding IEA
GO:0003697 Function Single-stranded DNA binding IDA 32165630
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
615292 24725 ENSG00000166801
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q96PZ2
Protein name Serine protease FAM111A (EC 3.4.21.-)
Protein function Single-stranded DNA-binding serine protease that mediates the proteolytic cleavage of covalent DNA-protein cross-links (DPCs) during DNA synthesis, thereby playing a key role in maintaining genomic integrity (PubMed:32165630). DPCs are highly to
PDB 8S9K , 8S9L
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13365 Trypsin_2 370 555 Domain
Sequence
MSCKKQRSRKHSVNEKCNMKIEHYFSPVSKEQQNNCSTSLMRMESRGDPRATTNTQAQRF
HSPKKNPEDQTMPQNRTIYVTLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIET
HQGQEMLVRGTEGIKEYINLGMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTE
CVKFYIHAIGIGKCKRRIVKCGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDW
KLIENNDTILESTQPVDELEGRYFQVEVEKRMVPSAAASQNPESEKRNTCVLREQIVAQY
PSLKRESEKIIENFKKKMKVKNGETLFELHRTTFGKVTKNSSSIKVVKLLVRLSDSVGYL
FWDSATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATIIGQCVRVTFGYEELKDK
ETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPVPLSGLIHIIGHPYGEKK
QIDACAVIPQGQRAKKCQERVQSKKAESPEYVHMYTQRSFQKIVHNPDVITYDTEFFFGA
SGSPVFDSKGSLVAM
HAAGFAYTYQNETRSIIEFGSTMESILLDIKQRHKPWYEEVFVNQ
QDVEMMSDEDL
Sequence length 611
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
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Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Autosomal dominant Kenny-Caffey syndrome Likely pathogenic; Pathogenic rs587777011, rs1565206032 RCV000050209
RCV001836635
Osteocraniostenosis Likely pathogenic; Pathogenic rs587777011, rs1565206032, rs587777013, rs587777014, rs587777015, rs145826377 RCV000988563
RCV000050210
RCV000050212
RCV000050213
RCV000050214
RCV001261994
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
FAM111A-related disorder Conflicting classifications of pathogenicity; Likely benign; Uncertain significance; Benign rs149508004, rs1298422871, rs138457522, rs910464497, rs901891770, rs751806560, rs749523037, rs1449491419, rs368238427, rs149943652, rs533676902, rs147786828, rs117988338, rs144151093, rs757690219 RCV003913693
RCV003408213
RCV003973658
RCV003961224
RCV003412099
RCV003416813
RCV004750952
RCV003911910
RCV003962007
RCV003902771
RCV003933294
RCV003905810
RCV003962888
RCV003968011
RCV003913158
Microcephaly Likely benign rs150761330 RCV001252896
See cases Conflicting classifications of pathogenicity rs1298422871 RCV004584564
Skeletal dysplasia Conflicting classifications of pathogenicity rs376721381 RCV005626848
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Aicardi Goutieres syndrome Associate 32996714
Carcinoma Hepatocellular Associate 37400994
Developmental Disabilities Associate 23684011
Epileptic Encephalopathy Early Infantile 3 Associate 37793778
Gracile bone dysplasia Associate 23684011, 32776417
Hypoparathyroidism Associate 23684011, 31433868
Kenny Caffey syndrome Type 1 Associate 23684011, 32776417, 37793778
Kenny Caffey syndrome type 2 Associate 23996431, 32996714
Multiple System Atrophy Associate 32776417
Muscular Dystrophy Duchenne Associate 36619896