Gene Gene information from NCBI Gene database.
Entrez ID 6282
Gene name S100 calcium binding protein A11
Gene symbol S100A11
Synonyms (NCBI Gene)
HEL-S-43MLN70S100C
Chromosome 1
Chromosome location 1q21.3
Summary The protein encoded by this gene is a member of the S100 family of proteins containing 2 EF-hand calcium-binding motifs. S100 proteins are localized in the cytoplasm and/or nucleus of a wide range of cells, and involved in the regulation of a number of ce
miRNA miRNA information provided by mirtarbase database.
320
miRTarBase ID miRNA Experiments Reference
MIRT020889 hsa-miR-155-5p Proteomics 18668040
MIRT023889 hsa-miR-1-3p Proteomics 18668040
MIRT460531 hsa-miR-548az-5p HITS-CLIP 23706177
MIRT460530 hsa-miR-548t-5p HITS-CLIP 23706177
MIRT460529 hsa-miR-3609 HITS-CLIP 23706177
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
STAT3 Activation 24376686
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
31
GO ID Ontology Definition Evidence Reference
GO:0001726 Component Ruffle IDA 10913138
GO:0005509 Function Calcium ion binding IBA
GO:0005509 Function Calcium ion binding IEA
GO:0005515 Function Protein binding IPI 10913138, 31837246, 32296183, 36555597
GO:0005576 Component Extracellular region HDA 27068509
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
603114 10488 ENSG00000163191
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P31949
Protein name Protein S100-A11 (Calgizzarin) (Metastatic lymph node gene 70 protein) (MLN 70) (Protein S100-C) (S100 calcium-binding protein A11) [Cleaved into: Protein S100-A11, N-terminally processed]
Protein function Facilitates the differentiation and the cornification of keratinocytes.
PDB 1V4Z , 1V50 , 2LUC
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01023 S_100 10 52 S-100/ICaBP type calcium binding domain Domain
PF00036 EF-hand_1 59 87 EF hand Domain
Sequence
Sequence length 105
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Neutrophil degranulation
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
3
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ASTHMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ATOPIC ECZEMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LIVER CIRRHOSIS, EXPERIMENTAL CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References Evidence Score
Adenocarcinoma Stimulate 26544866
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of Lung Associate 26544866
★☆☆☆☆
Found in Text Mining only
Adenomatous Polyposis Coli Associate 33466593
★☆☆☆☆
Found in Text Mining only
Arthritis Rheumatoid Associate 28446208, 33727634, 36614150
★☆☆☆☆
Found in Text Mining only
Autoimmune Diseases Associate 33727634
★☆☆☆☆
Found in Text Mining only
Bipolar Disorder Associate 25487697
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Stimulate 21153724
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Associate 28051137, 38129538
★☆☆☆☆
Found in Text Mining only
Carcinoma Hepatocellular Associate 24376686, 33546025, 37166978
★☆☆☆☆
Found in Text Mining only
Carcinoma Non Small Cell Lung Associate 17537172, 25940438
★☆☆☆☆
Found in Text Mining only