Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene SNPs miRNA Transcription factors Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	6256
Gene name Gene Name - the full gene name approved by the HGNC.	Retinoid X receptor alpha
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	RXRA
Synonyms (NCBI Gene) Gene synonyms aliases	NR2B1, RXR-alpha, RXRalpha
Chromosome Chromosome number	9
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	9q34.2
Summary Summary of gene provided in NCBI Entrez Gene.	Retinoid X receptors (RXRs) and retinoic acid receptors (RARs) are nuclear receptors that mediate the biological effects of retinoids by their involvement in retinoic acid-mediated gene activation. These receptors function as transcription factors by bind

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SNP ID	Visualize variation	Clinical significance	Consequence
rs1057519958	C>A,T	Likely-pathogenic	Coding sequence variant, missense variant
rs1588299621	G>A	Likely-pathogenic	Coding sequence variant, missense variant

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miRTarBase ID	miRNA	Experiments	Reference
MIRT042547	hsa-miR-423-3p	CLASH	23622248
MIRT054229	hsa-miR-128-3p	Luciferase reporter assay, Microarray, qRT-PCR, Western blot	23990020
MIRT054351	hsa-miR-574-3p	Luciferase reporter assay, Microarray, qRT-PCR, Western blot	23626837
MIRT617638	hsa-miR-6782-3p	HITS-CLIP	23824327
MIRT617637	hsa-miR-488-5p	HITS-CLIP	23824327
MIRT617636	hsa-miR-4724-3p	HITS-CLIP	23824327
MIRT617635	hsa-miR-520a-5p	HITS-CLIP	23824327
MIRT617634	hsa-miR-525-5p	HITS-CLIP	23824327
MIRT617633	hsa-miR-7702	HITS-CLIP	23824327
MIRT617632	hsa-miR-3180-5p	HITS-CLIP	23824327
MIRT617631	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT543486	hsa-miR-4258	PAR-CLIP	20371350
MIRT543482	hsa-miR-4722-3p	PAR-CLIP	20371350
MIRT543483	hsa-miR-6727-3p	PAR-CLIP	20371350
MIRT543481	hsa-miR-6747-3p	PAR-CLIP	20371350
MIRT543480	hsa-miR-1976	PAR-CLIP	20371350
MIRT543479	hsa-miR-4769-3p	PAR-CLIP	20371350
MIRT543478	hsa-miR-6817-5p	PAR-CLIP	20371350
MIRT543477	hsa-miR-3692-3p	PAR-CLIP	20371350
MIRT543486	hsa-miR-4258	PAR-CLIP	20371350
MIRT543482	hsa-miR-4722-3p	PAR-CLIP	20371350
MIRT543483	hsa-miR-6727-3p	PAR-CLIP	20371350
MIRT543481	hsa-miR-6747-3p	PAR-CLIP	20371350
MIRT543480	hsa-miR-1976	PAR-CLIP	20371350
MIRT543479	hsa-miR-4769-3p	PAR-CLIP	20371350
MIRT543478	hsa-miR-6817-5p	PAR-CLIP	20371350
MIRT543477	hsa-miR-3692-3p	PAR-CLIP	20371350
MIRT543486	hsa-miR-4258	PAR-CLIP	21572407
MIRT543485	hsa-miR-4667-3p	PAR-CLIP	21572407
MIRT543484	hsa-miR-660-3p	PAR-CLIP	21572407
MIRT543482	hsa-miR-4722-3p	PAR-CLIP	21572407
MIRT543483	hsa-miR-6727-3p	PAR-CLIP	21572407
MIRT543481	hsa-miR-6747-3p	PAR-CLIP	21572407
MIRT543480	hsa-miR-1976	PAR-CLIP	21572407
MIRT543479	hsa-miR-4769-3p	PAR-CLIP	21572407
MIRT543478	hsa-miR-6817-5p	PAR-CLIP	21572407
MIRT543477	hsa-miR-3692-3p	PAR-CLIP	21572407
MIRT486423	hsa-miR-3940-3p	PAR-CLIP	23592263
MIRT486422	hsa-miR-596	PAR-CLIP	23592263
MIRT486421	hsa-miR-4532	PAR-CLIP	23592263
MIRT486420	hsa-miR-4734	PAR-CLIP	23592263
MIRT486419	hsa-miR-7106-5p	PAR-CLIP	23592263
MIRT486418	hsa-miR-486-3p	PAR-CLIP	23592263
MIRT617638	hsa-miR-6782-3p	HITS-CLIP	23824327
MIRT617637	hsa-miR-488-5p	HITS-CLIP	23824327
MIRT617636	hsa-miR-4724-3p	HITS-CLIP	23824327
MIRT617635	hsa-miR-520a-5p	HITS-CLIP	23824327
MIRT617634	hsa-miR-525-5p	HITS-CLIP	23824327
MIRT617633	hsa-miR-7702	HITS-CLIP	23824327
MIRT617632	hsa-miR-3180-5p	HITS-CLIP	23824327
MIRT617631	hsa-miR-2681-5p	HITS-CLIP	23824327
MIRT543486	hsa-miR-4258	PAR-CLIP	20371350
MIRT543482	hsa-miR-4722-3p	PAR-CLIP	20371350
MIRT543483	hsa-miR-6727-3p	PAR-CLIP	20371350
MIRT543481	hsa-miR-6747-3p	PAR-CLIP	20371350
MIRT543480	hsa-miR-1976	PAR-CLIP	20371350
MIRT543479	hsa-miR-4769-3p	PAR-CLIP	20371350
MIRT543478	hsa-miR-6817-5p	PAR-CLIP	20371350
MIRT543477	hsa-miR-3692-3p	PAR-CLIP	20371350
MIRT543486	hsa-miR-4258	PAR-CLIP	20371350
MIRT543482	hsa-miR-4722-3p	PAR-CLIP	20371350
MIRT543483	hsa-miR-6727-3p	PAR-CLIP	20371350
MIRT543481	hsa-miR-6747-3p	PAR-CLIP	20371350
MIRT543480	hsa-miR-1976	PAR-CLIP	20371350
MIRT543479	hsa-miR-4769-3p	PAR-CLIP	20371350
MIRT543478	hsa-miR-6817-5p	PAR-CLIP	20371350
MIRT543477	hsa-miR-3692-3p	PAR-CLIP	20371350
MIRT543486	hsa-miR-4258	PAR-CLIP	21572407
MIRT543485	hsa-miR-4667-3p	PAR-CLIP	21572407
MIRT543484	hsa-miR-660-3p	PAR-CLIP	21572407
MIRT543482	hsa-miR-4722-3p	PAR-CLIP	21572407
MIRT543483	hsa-miR-6727-3p	PAR-CLIP	21572407
MIRT543481	hsa-miR-6747-3p	PAR-CLIP	21572407
MIRT543480	hsa-miR-1976	PAR-CLIP	21572407
MIRT543479	hsa-miR-4769-3p	PAR-CLIP	21572407
MIRT543478	hsa-miR-6817-5p	PAR-CLIP	21572407
MIRT543477	hsa-miR-3692-3p	PAR-CLIP	21572407
MIRT486423	hsa-miR-3940-3p	PAR-CLIP	23592263
MIRT486422	hsa-miR-596	PAR-CLIP	23592263
MIRT486421	hsa-miR-4532	PAR-CLIP	23592263
MIRT486420	hsa-miR-4734	PAR-CLIP	23592263
MIRT486419	hsa-miR-7106-5p	PAR-CLIP	23592263
MIRT486418	hsa-miR-486-3p	PAR-CLIP	23592263
MIRT1323250	hsa-miR-1205	CLIP-seq
MIRT1323251	hsa-miR-1207-3p	CLIP-seq
MIRT1323252	hsa-miR-1207-5p	CLIP-seq
MIRT1323253	hsa-miR-1225-3p	CLIP-seq
MIRT1323254	hsa-miR-1233	CLIP-seq
MIRT1323255	hsa-miR-124	CLIP-seq
MIRT1323256	hsa-miR-1243	CLIP-seq
MIRT1323257	hsa-miR-1262	CLIP-seq
MIRT1323258	hsa-miR-1277	CLIP-seq
MIRT1323259	hsa-miR-128	CLIP-seq
MIRT1323260	hsa-miR-1293	CLIP-seq
MIRT1323261	hsa-miR-1298	CLIP-seq
MIRT1323262	hsa-miR-130a	CLIP-seq
MIRT1323263	hsa-miR-130b	CLIP-seq
MIRT1323264	hsa-miR-1321	CLIP-seq
MIRT1323265	hsa-miR-1324	CLIP-seq
MIRT1323266	hsa-miR-1343	CLIP-seq
MIRT1323267	hsa-miR-138	CLIP-seq
MIRT1323268	hsa-miR-145	CLIP-seq
MIRT1323269	hsa-miR-147b	CLIP-seq
MIRT1323270	hsa-miR-148a	CLIP-seq
MIRT1323271	hsa-miR-148b	CLIP-seq
MIRT1323272	hsa-miR-150	CLIP-seq
MIRT1323273	hsa-miR-152	CLIP-seq
MIRT1323274	hsa-miR-1825	CLIP-seq
MIRT1323275	hsa-miR-1908	CLIP-seq
MIRT1323276	hsa-miR-1909	CLIP-seq
MIRT1323277	hsa-miR-191	CLIP-seq
MIRT1323278	hsa-miR-197	CLIP-seq
MIRT1323279	hsa-miR-1972	CLIP-seq
MIRT1323280	hsa-miR-199a-5p	CLIP-seq
MIRT1323281	hsa-miR-199b-5p	CLIP-seq
MIRT1323282	hsa-miR-19a	CLIP-seq
MIRT1323283	hsa-miR-19b	CLIP-seq
MIRT1323284	hsa-miR-200b	CLIP-seq
MIRT1323285	hsa-miR-200c	CLIP-seq
MIRT1323286	hsa-miR-2117	CLIP-seq
MIRT1323287	hsa-miR-27a	CLIP-seq
MIRT1323288	hsa-miR-27b	CLIP-seq
MIRT1323289	hsa-miR-296-5p	CLIP-seq
MIRT1323290	hsa-miR-298	CLIP-seq
MIRT1323291	hsa-miR-301a	CLIP-seq
MIRT1323292	hsa-miR-301b	CLIP-seq
MIRT1323293	hsa-miR-3064-5p	CLIP-seq
MIRT1323294	hsa-miR-3120-3p	CLIP-seq
MIRT1323295	hsa-miR-3121-3p	CLIP-seq
MIRT1323296	hsa-miR-3126-5p	CLIP-seq
MIRT1323297	hsa-miR-3127-5p	CLIP-seq
MIRT1323298	hsa-miR-3150a-3p	CLIP-seq
MIRT1323299	hsa-miR-3153	CLIP-seq
MIRT1323300	hsa-miR-3155	CLIP-seq
MIRT1323301	hsa-miR-3155b	CLIP-seq
MIRT1323302	hsa-miR-3158-5p	CLIP-seq
MIRT1323303	hsa-miR-3160-3p	CLIP-seq
MIRT1323304	hsa-miR-3163	CLIP-seq
MIRT1323305	hsa-miR-3165	CLIP-seq
MIRT1323306	hsa-miR-3167	CLIP-seq
MIRT1323307	hsa-miR-3175	CLIP-seq
MIRT1323308	hsa-miR-3183	CLIP-seq
MIRT1323309	hsa-miR-3184	CLIP-seq
MIRT1323310	hsa-miR-3189-5p	CLIP-seq
MIRT1323311	hsa-miR-3197	CLIP-seq
MIRT1323312	hsa-miR-326	CLIP-seq
MIRT1323313	hsa-miR-330-5p	CLIP-seq
MIRT1323314	hsa-miR-338-3p	CLIP-seq
MIRT1323315	hsa-miR-3545-3p	CLIP-seq
MIRT1323316	hsa-miR-3613-3p	CLIP-seq
MIRT1323317	hsa-miR-3650	CLIP-seq
MIRT1323318	hsa-miR-3664-3p	CLIP-seq
MIRT1323319	hsa-miR-3666	CLIP-seq
MIRT1323320	hsa-miR-3667-3p	CLIP-seq
MIRT1323321	hsa-miR-371b-3p	CLIP-seq
MIRT1323322	hsa-miR-3918	CLIP-seq
MIRT1323323	hsa-miR-3926	CLIP-seq
MIRT1323324	hsa-miR-3934	CLIP-seq
MIRT1323325	hsa-miR-3974	CLIP-seq
MIRT1323326	hsa-miR-423-5p	CLIP-seq
MIRT1323327	hsa-miR-4252	CLIP-seq
MIRT1323328	hsa-miR-4261	CLIP-seq
MIRT1323329	hsa-miR-4267	CLIP-seq
MIRT1323330	hsa-miR-4269	CLIP-seq
MIRT1323331	hsa-miR-4273	CLIP-seq
MIRT1323332	hsa-miR-4279	CLIP-seq
MIRT1323333	hsa-miR-4282	CLIP-seq
MIRT1323334	hsa-miR-429	CLIP-seq
MIRT1323335	hsa-miR-4295	CLIP-seq
MIRT1323336	hsa-miR-4297	CLIP-seq
MIRT1323337	hsa-miR-4323	CLIP-seq
MIRT1323338	hsa-miR-4324	CLIP-seq
MIRT1323339	hsa-miR-4419a	CLIP-seq
MIRT1323340	hsa-miR-4433	CLIP-seq
MIRT739035	hsa-miR-4436b-3p	CLIP-seq
MIRT1323341	hsa-miR-4438	CLIP-seq
MIRT1323342	hsa-miR-4446-3p	CLIP-seq
MIRT1323343	hsa-miR-4459	CLIP-seq
MIRT1323344	hsa-miR-4473	CLIP-seq
MIRT1323345	hsa-miR-4475	CLIP-seq
MIRT1323346	hsa-miR-4476	CLIP-seq
MIRT1323347	hsa-miR-4483	CLIP-seq
MIRT1323348	hsa-miR-4487	CLIP-seq
MIRT1323349	hsa-miR-4493	CLIP-seq
MIRT1323350	hsa-miR-4505	CLIP-seq
MIRT1323351	hsa-miR-4509	CLIP-seq
MIRT1323352	hsa-miR-4510	CLIP-seq
MIRT1323353	hsa-miR-4512	CLIP-seq
MIRT1323354	hsa-miR-4514	CLIP-seq
MIRT1323355	hsa-miR-4539	CLIP-seq
MIRT1323356	hsa-miR-454	CLIP-seq
MIRT1323357	hsa-miR-4645-5p	CLIP-seq
MIRT1323358	hsa-miR-4646-5p	CLIP-seq
MIRT1323359	hsa-miR-4650-5p	CLIP-seq
MIRT1323360	hsa-miR-4660	CLIP-seq
MIRT1323361	hsa-miR-4666-5p	CLIP-seq
MIRT1323362	hsa-miR-4667-5p	CLIP-seq
MIRT1323363	hsa-miR-4668-5p	CLIP-seq
MIRT1323364	hsa-miR-4671-3p	CLIP-seq
MIRT1323365	hsa-miR-4673	CLIP-seq
MIRT1323366	hsa-miR-4675	CLIP-seq
MIRT1323367	hsa-miR-4681	CLIP-seq
MIRT1323368	hsa-miR-4687-5p	CLIP-seq
MIRT1323369	hsa-miR-4691-3p	CLIP-seq
MIRT1323370	hsa-miR-4692	CLIP-seq
MIRT1323371	hsa-miR-4700-5p	CLIP-seq
MIRT1323372	hsa-miR-4701-3p	CLIP-seq
MIRT1323373	hsa-miR-4704-3p	CLIP-seq
MIRT1323374	hsa-miR-4706	CLIP-seq
MIRT1323375	hsa-miR-4713-3p	CLIP-seq
MIRT1323376	hsa-miR-4714-3p	CLIP-seq
MIRT1323377	hsa-miR-4723-3p	CLIP-seq
MIRT1323378	hsa-miR-4728-5p	CLIP-seq
MIRT1323379	hsa-miR-4731-5p	CLIP-seq
MIRT1323380	hsa-miR-4732-5p	CLIP-seq
MIRT1323381	hsa-miR-4733-3p	CLIP-seq
MIRT1323382	hsa-miR-4739	CLIP-seq
MIRT1323383	hsa-miR-4741	CLIP-seq
MIRT1323384	hsa-miR-4744	CLIP-seq
MIRT1323385	hsa-miR-4747-5p	CLIP-seq
MIRT1323386	hsa-miR-4749-5p	CLIP-seq
MIRT1323387	hsa-miR-4753-5p	CLIP-seq
MIRT1323388	hsa-miR-4755-3p	CLIP-seq
MIRT1323389	hsa-miR-4756-5p	CLIP-seq
MIRT1323390	hsa-miR-4758-3p	CLIP-seq
MIRT1323391	hsa-miR-4763-3p	CLIP-seq
MIRT1323392	hsa-miR-4766-5p	CLIP-seq
MIRT1323393	hsa-miR-4768-3p	CLIP-seq
MIRT1323394	hsa-miR-4779	CLIP-seq
MIRT1323395	hsa-miR-4793-5p	CLIP-seq
MIRT1323396	hsa-miR-4795-5p	CLIP-seq
MIRT1323397	hsa-miR-484	CLIP-seq
MIRT1323398	hsa-miR-493	CLIP-seq
MIRT1323399	hsa-miR-506	CLIP-seq
MIRT1323400	hsa-miR-509-3p	CLIP-seq
MIRT1323401	hsa-miR-5096	CLIP-seq
MIRT1323402	hsa-miR-510	CLIP-seq
MIRT1323403	hsa-miR-512-3p	CLIP-seq
MIRT1323404	hsa-miR-512-5p	CLIP-seq
MIRT1323405	hsa-miR-513a-5p	CLIP-seq
MIRT1323406	hsa-miR-520d-5p	CLIP-seq
MIRT1323407	hsa-miR-520f	CLIP-seq
MIRT1323408	hsa-miR-524-5p	CLIP-seq
MIRT1323409	hsa-miR-548a-5p	CLIP-seq
MIRT1323410	hsa-miR-548aa	CLIP-seq
MIRT1323411	hsa-miR-548ab	CLIP-seq
MIRT1323412	hsa-miR-548ak	CLIP-seq
MIRT1323413	hsa-miR-548b-5p	CLIP-seq
MIRT1323414	hsa-miR-548c-3p	CLIP-seq
MIRT1323415	hsa-miR-548c-5p	CLIP-seq
MIRT1323416	hsa-miR-548d-5p	CLIP-seq
MIRT1323417	hsa-miR-548h	CLIP-seq
MIRT1323418	hsa-miR-548i	CLIP-seq
MIRT1323419	hsa-miR-548j	CLIP-seq
MIRT1323420	hsa-miR-548k	CLIP-seq
MIRT1323421	hsa-miR-548l	CLIP-seq
MIRT1323422	hsa-miR-548n	CLIP-seq
MIRT1323423	hsa-miR-548w	CLIP-seq
MIRT1323424	hsa-miR-548y	CLIP-seq
MIRT1323425	hsa-miR-552	CLIP-seq
MIRT1323426	hsa-miR-555	CLIP-seq
MIRT1323427	hsa-miR-556-5p	CLIP-seq
MIRT1323428	hsa-miR-558	CLIP-seq
MIRT1323429	hsa-miR-559	CLIP-seq
MIRT1323430	hsa-miR-570	CLIP-seq
MIRT1323431	hsa-miR-583	CLIP-seq
MIRT1323432	hsa-miR-604	CLIP-seq
MIRT1323433	hsa-miR-634	CLIP-seq
MIRT1323434	hsa-miR-635	CLIP-seq
MIRT1323435	hsa-miR-647	CLIP-seq
MIRT1323436	hsa-miR-663	CLIP-seq
MIRT1323437	hsa-miR-664	CLIP-seq
MIRT1323438	hsa-miR-760	CLIP-seq
MIRT1323439	hsa-miR-876-5p	CLIP-seq
MIRT1323440	hsa-miR-885-3p	CLIP-seq
MIRT1323441	hsa-miR-887	CLIP-seq
MIRT1323442	hsa-miR-939	CLIP-seq
MIRT739035	hsa-miR-4436b-3p	CLIP-seq
MIRT1323350	hsa-miR-4505	CLIP-seq
MIRT1323379	hsa-miR-4731-5p	CLIP-seq
MIRT1556998	hsa-miR-3194-5p	CLIP-seq
MIRT739035	hsa-miR-4436b-3p	CLIP-seq
MIRT739035	hsa-miR-4436b-3p	CLIP-seq
MIRT739035	hsa-miR-4436b-3p	CLIP-seq
MIRT2095893	hsa-miR-10a	CLIP-seq
MIRT2095894	hsa-miR-10b	CLIP-seq
MIRT2095895	hsa-miR-1180	CLIP-seq
MIRT2095896	hsa-miR-1184	CLIP-seq
MIRT2095897	hsa-miR-1197	CLIP-seq
MIRT1323250	hsa-miR-1205	CLIP-seq
MIRT1323251	hsa-miR-1207-3p	CLIP-seq
MIRT1323252	hsa-miR-1207-5p	CLIP-seq
MIRT2095898	hsa-miR-1224-3p	CLIP-seq
MIRT2095899	hsa-miR-1238	CLIP-seq
MIRT1323255	hsa-miR-124	CLIP-seq
MIRT1323256	hsa-miR-1243	CLIP-seq
MIRT2095900	hsa-miR-1246	CLIP-seq
MIRT2095901	hsa-miR-1253	CLIP-seq
MIRT2095902	hsa-miR-1260	CLIP-seq
MIRT2095903	hsa-miR-1260b	CLIP-seq
MIRT1323258	hsa-miR-1277	CLIP-seq
MIRT1323259	hsa-miR-128	CLIP-seq
MIRT2095904	hsa-miR-1280	CLIP-seq
MIRT2095905	hsa-miR-1301	CLIP-seq
MIRT1323262	hsa-miR-130a	CLIP-seq
MIRT1323263	hsa-miR-130b	CLIP-seq
MIRT2095906	hsa-miR-132	CLIP-seq
MIRT1323264	hsa-miR-1321	CLIP-seq
MIRT1323265	hsa-miR-1324	CLIP-seq
MIRT2095907	hsa-miR-141	CLIP-seq
MIRT1323268	hsa-miR-145	CLIP-seq
MIRT2095908	hsa-miR-1470	CLIP-seq
MIRT1323270	hsa-miR-148a	CLIP-seq
MIRT1323271	hsa-miR-148b	CLIP-seq
MIRT2095909	hsa-miR-149	CLIP-seq
MIRT1323273	hsa-miR-152	CLIP-seq
MIRT1323274	hsa-miR-1825	CLIP-seq
MIRT2095910	hsa-miR-186	CLIP-seq
MIRT1323276	hsa-miR-1909	CLIP-seq
MIRT2095911	hsa-miR-1913	CLIP-seq
MIRT1323278	hsa-miR-197	CLIP-seq
MIRT1323279	hsa-miR-1972	CLIP-seq
MIRT1323280	hsa-miR-199a-5p	CLIP-seq
MIRT1323281	hsa-miR-199b-5p	CLIP-seq
MIRT1323282	hsa-miR-19a	CLIP-seq
MIRT1323283	hsa-miR-19b	CLIP-seq
MIRT2095912	hsa-miR-200a	CLIP-seq
MIRT1323284	hsa-miR-200b	CLIP-seq
MIRT1323285	hsa-miR-200c	CLIP-seq
MIRT1323286	hsa-miR-2117	CLIP-seq
MIRT2095913	hsa-miR-212	CLIP-seq
MIRT2095914	hsa-miR-216b	CLIP-seq
MIRT2095915	hsa-miR-2277-3p	CLIP-seq
MIRT2095916	hsa-miR-2278	CLIP-seq
MIRT2095917	hsa-miR-24	CLIP-seq
MIRT2095918	hsa-miR-2467-5p	CLIP-seq
MIRT2095919	hsa-miR-2682	CLIP-seq
MIRT1323287	hsa-miR-27a	CLIP-seq
MIRT1323288	hsa-miR-27b	CLIP-seq
MIRT1323289	hsa-miR-296-5p	CLIP-seq
MIRT1323291	hsa-miR-301a	CLIP-seq
MIRT1323292	hsa-miR-301b	CLIP-seq
MIRT1323293	hsa-miR-3064-5p	CLIP-seq
MIRT2095920	hsa-miR-3119	CLIP-seq
MIRT1323295	hsa-miR-3121-3p	CLIP-seq
MIRT1323296	hsa-miR-3126-5p	CLIP-seq
MIRT1323297	hsa-miR-3127-5p	CLIP-seq
MIRT2095921	hsa-miR-3135	CLIP-seq
MIRT2095922	hsa-miR-3136-3p	CLIP-seq
MIRT1323299	hsa-miR-3153	CLIP-seq
MIRT1323300	hsa-miR-3155	CLIP-seq
MIRT1323301	hsa-miR-3155b	CLIP-seq
MIRT1323303	hsa-miR-3160-3p	CLIP-seq
MIRT2095923	hsa-miR-3160-5p	CLIP-seq
MIRT1323305	hsa-miR-3165	CLIP-seq
MIRT2095924	hsa-miR-3173-3p	CLIP-seq
MIRT1323308	hsa-miR-3183	CLIP-seq
MIRT2095925	hsa-miR-3188	CLIP-seq
MIRT2095926	hsa-miR-3192	CLIP-seq
MIRT2095927	hsa-miR-3193	CLIP-seq
MIRT1556998	hsa-miR-3194-5p	CLIP-seq
MIRT2095928	hsa-miR-3195	CLIP-seq
MIRT2095929	hsa-miR-3200-3p	CLIP-seq
MIRT2095930	hsa-miR-320a	CLIP-seq
MIRT2095931	hsa-miR-320b	CLIP-seq
MIRT2095932	hsa-miR-320c	CLIP-seq
MIRT2095933	hsa-miR-320d	CLIP-seq
MIRT2095934	hsa-miR-324-3p	CLIP-seq
MIRT1323314	hsa-miR-338-3p	CLIP-seq
MIRT2095935	hsa-miR-342-5p	CLIP-seq
MIRT2095936	hsa-miR-34a	CLIP-seq
MIRT2095937	hsa-miR-34c-5p	CLIP-seq
MIRT1323315	hsa-miR-3545-3p	CLIP-seq
MIRT2095938	hsa-miR-3591-3p	CLIP-seq
MIRT1323316	hsa-miR-3613-3p	CLIP-seq
MIRT2095939	hsa-miR-3616-3p	CLIP-seq
MIRT2095940	hsa-miR-3622a-3p	CLIP-seq
MIRT2095941	hsa-miR-3622b-3p	CLIP-seq
MIRT2095942	hsa-miR-3652	CLIP-seq
MIRT1323318	hsa-miR-3664-3p	CLIP-seq
MIRT1323319	hsa-miR-3666	CLIP-seq
MIRT2095943	hsa-miR-3667-5p	CLIP-seq
MIRT2095944	hsa-miR-3714	CLIP-seq
MIRT2095945	hsa-miR-378g	CLIP-seq
MIRT2095946	hsa-miR-3910	CLIP-seq
MIRT2095947	hsa-miR-3917	CLIP-seq
MIRT2095948	hsa-miR-3919	CLIP-seq
MIRT2095949	hsa-miR-3925-3p	CLIP-seq
MIRT2095950	hsa-miR-3929	CLIP-seq
MIRT2095951	hsa-miR-3942-3p	CLIP-seq
MIRT2095952	hsa-miR-3975	CLIP-seq
MIRT2095953	hsa-miR-3978	CLIP-seq
MIRT2095954	hsa-miR-4251	CLIP-seq
MIRT1323327	hsa-miR-4252	CLIP-seq
MIRT1323328	hsa-miR-4261	CLIP-seq
MIRT1323329	hsa-miR-4267	CLIP-seq
MIRT1323330	hsa-miR-4269	CLIP-seq
MIRT2095955	hsa-miR-4270	CLIP-seq
MIRT1323331	hsa-miR-4273	CLIP-seq
MIRT2095956	hsa-miR-4276	CLIP-seq
MIRT2095957	hsa-miR-4286	CLIP-seq
MIRT1323334	hsa-miR-429	CLIP-seq
MIRT2095958	hsa-miR-4290	CLIP-seq
MIRT2095959	hsa-miR-4292	CLIP-seq
MIRT1323335	hsa-miR-4295	CLIP-seq
MIRT1323336	hsa-miR-4297	CLIP-seq
MIRT2095960	hsa-miR-4300	CLIP-seq
MIRT2095961	hsa-miR-4308	CLIP-seq
MIRT1323338	hsa-miR-4324	CLIP-seq
MIRT1323339	hsa-miR-4419a	CLIP-seq
MIRT2095962	hsa-miR-4419b	CLIP-seq
MIRT2095963	hsa-miR-4421	CLIP-seq
MIRT2095964	hsa-miR-4423-3p	CLIP-seq
MIRT2095965	hsa-miR-4428	CLIP-seq
MIRT2095966	hsa-miR-4429	CLIP-seq
MIRT2095967	hsa-miR-4430	CLIP-seq
MIRT2095968	hsa-miR-4435	CLIP-seq
MIRT2095969	hsa-miR-4436a	CLIP-seq
MIRT739035	hsa-miR-4436b-3p	CLIP-seq
MIRT2095970	hsa-miR-4437	CLIP-seq
MIRT1323341	hsa-miR-4438	CLIP-seq
MIRT2095971	hsa-miR-4441	CLIP-seq
MIRT1323342	hsa-miR-4446-3p	CLIP-seq
MIRT1323343	hsa-miR-4459	CLIP-seq
MIRT2095972	hsa-miR-4467	CLIP-seq
MIRT2095973	hsa-miR-4468	CLIP-seq
MIRT1323344	hsa-miR-4473	CLIP-seq
MIRT1323346	hsa-miR-4476	CLIP-seq
MIRT2095974	hsa-miR-4478	CLIP-seq
MIRT1323348	hsa-miR-4487	CLIP-seq
MIRT2095975	hsa-miR-4490	CLIP-seq
MIRT2095976	hsa-miR-4492	CLIP-seq
MIRT1323349	hsa-miR-4493	CLIP-seq
MIRT2095977	hsa-miR-4498	CLIP-seq
MIRT2095978	hsa-miR-449a	CLIP-seq
MIRT2095979	hsa-miR-449b	CLIP-seq
MIRT2095980	hsa-miR-449c	CLIP-seq
MIRT2095981	hsa-miR-4504	CLIP-seq
MIRT1323350	hsa-miR-4505	CLIP-seq
MIRT1323351	hsa-miR-4509	CLIP-seq
MIRT1323352	hsa-miR-4510	CLIP-seq
MIRT1323353	hsa-miR-4512	CLIP-seq
MIRT1323354	hsa-miR-4514	CLIP-seq
MIRT2095982	hsa-miR-4519	CLIP-seq
MIRT2095983	hsa-miR-4520a-5p	CLIP-seq
MIRT2095984	hsa-miR-4520b-5p	CLIP-seq
MIRT2095985	hsa-miR-4530	CLIP-seq
MIRT1323356	hsa-miR-454	CLIP-seq
MIRT2095986	hsa-miR-4640-3p	CLIP-seq
MIRT1323357	hsa-miR-4645-5p	CLIP-seq
MIRT1323358	hsa-miR-4646-5p	CLIP-seq
MIRT2095987	hsa-miR-4649-3p	CLIP-seq
MIRT1323359	hsa-miR-4650-5p	CLIP-seq
MIRT1323360	hsa-miR-4660	CLIP-seq
MIRT2095988	hsa-miR-4664-5p	CLIP-seq
MIRT1323363	hsa-miR-4668-5p	CLIP-seq
MIRT1323364	hsa-miR-4671-3p	CLIP-seq
MIRT2095989	hsa-miR-4671-5p	CLIP-seq
MIRT1323365	hsa-miR-4673	CLIP-seq
MIRT2095990	hsa-miR-4677-3p	CLIP-seq
MIRT2095991	hsa-miR-4685-5p	CLIP-seq
MIRT1323368	hsa-miR-4687-5p	CLIP-seq
MIRT2095992	hsa-miR-4690-3p	CLIP-seq
MIRT1323369	hsa-miR-4691-3p	CLIP-seq
MIRT1323370	hsa-miR-4692	CLIP-seq
MIRT2095993	hsa-miR-4699-5p	CLIP-seq
MIRT2095994	hsa-miR-4700-3p	CLIP-seq
MIRT1323373	hsa-miR-4704-3p	CLIP-seq
MIRT2095995	hsa-miR-4708-3p	CLIP-seq
MIRT1323375	hsa-miR-4713-3p	CLIP-seq
MIRT1323376	hsa-miR-4714-3p	CLIP-seq
MIRT2095996	hsa-miR-4715-3p	CLIP-seq
MIRT2095997	hsa-miR-4717-5p	CLIP-seq
MIRT1323377	hsa-miR-4723-3p	CLIP-seq
MIRT2095998	hsa-miR-4725-5p	CLIP-seq
MIRT1323378	hsa-miR-4728-5p	CLIP-seq
MIRT2095999	hsa-miR-4730	CLIP-seq
MIRT1323379	hsa-miR-4731-5p	CLIP-seq
MIRT1323380	hsa-miR-4732-5p	CLIP-seq
MIRT1323381	hsa-miR-4733-3p	CLIP-seq
MIRT2096000	hsa-miR-4738-5p	CLIP-seq
MIRT1323382	hsa-miR-4739	CLIP-seq
MIRT1323384	hsa-miR-4744	CLIP-seq
MIRT2096001	hsa-miR-4747-3p	CLIP-seq
MIRT1323385	hsa-miR-4747-5p	CLIP-seq
MIRT2096002	hsa-miR-4753-3p	CLIP-seq
MIRT1323387	hsa-miR-4753-5p	CLIP-seq
MIRT1323388	hsa-miR-4755-3p	CLIP-seq
MIRT2096003	hsa-miR-4756-3p	CLIP-seq
MIRT1323389	hsa-miR-4756-5p	CLIP-seq
MIRT1323391	hsa-miR-4763-3p	CLIP-seq
MIRT1323392	hsa-miR-4766-5p	CLIP-seq
MIRT2096004	hsa-miR-4768-5p	CLIP-seq
MIRT2096005	hsa-miR-4773	CLIP-seq
MIRT1323394	hsa-miR-4779	CLIP-seq
MIRT1323395	hsa-miR-4793-5p	CLIP-seq
MIRT2096006	hsa-miR-4794	CLIP-seq
MIRT1323396	hsa-miR-4795-5p	CLIP-seq
MIRT2096007	hsa-miR-483-3p	CLIP-seq
MIRT1323397	hsa-miR-484	CLIP-seq
MIRT2096008	hsa-miR-485-5p	CLIP-seq
MIRT2096009	hsa-miR-488	CLIP-seq
MIRT1323398	hsa-miR-493	CLIP-seq
MIRT2096010	hsa-miR-504	CLIP-seq
MIRT2096011	hsa-miR-5047	CLIP-seq
MIRT1323399	hsa-miR-506	CLIP-seq
MIRT2096012	hsa-miR-508-5p	CLIP-seq
MIRT1323400	hsa-miR-509-3p	CLIP-seq
MIRT1323401	hsa-miR-5096	CLIP-seq
MIRT1323403	hsa-miR-512-3p	CLIP-seq
MIRT1323404	hsa-miR-512-5p	CLIP-seq
MIRT1323405	hsa-miR-513a-5p	CLIP-seq
MIRT2096013	hsa-miR-515-3p	CLIP-seq
MIRT2096014	hsa-miR-516b	CLIP-seq
MIRT2096015	hsa-miR-519e	CLIP-seq
MIRT1323407	hsa-miR-520f	CLIP-seq
MIRT2096016	hsa-miR-541	CLIP-seq
MIRT2096017	hsa-miR-544b	CLIP-seq
MIRT1323409	hsa-miR-548a-5p	CLIP-seq
MIRT1323410	hsa-miR-548aa	CLIP-seq
MIRT1323411	hsa-miR-548ab	CLIP-seq
MIRT1323412	hsa-miR-548ak	CLIP-seq
MIRT1323413	hsa-miR-548b-5p	CLIP-seq
MIRT1323414	hsa-miR-548c-3p	CLIP-seq
MIRT1323415	hsa-miR-548c-5p	CLIP-seq
MIRT1323416	hsa-miR-548d-5p	CLIP-seq
MIRT2096018	hsa-miR-548g	CLIP-seq
MIRT1323417	hsa-miR-548h	CLIP-seq
MIRT1323418	hsa-miR-548i	CLIP-seq
MIRT1323419	hsa-miR-548j	CLIP-seq
MIRT1323420	hsa-miR-548k	CLIP-seq
MIRT1323421	hsa-miR-548l	CLIP-seq
MIRT1323423	hsa-miR-548w	CLIP-seq
MIRT1323424	hsa-miR-548y	CLIP-seq
MIRT2096019	hsa-miR-549	CLIP-seq
MIRT2096020	hsa-miR-550a	CLIP-seq
MIRT1323425	hsa-miR-552	CLIP-seq
MIRT1323426	hsa-miR-555	CLIP-seq
MIRT1323427	hsa-miR-556-5p	CLIP-seq
MIRT1323428	hsa-miR-558	CLIP-seq
MIRT1323429	hsa-miR-559	CLIP-seq
MIRT1323430	hsa-miR-570	CLIP-seq
MIRT1323431	hsa-miR-583	CLIP-seq
MIRT1323433	hsa-miR-634	CLIP-seq
MIRT1323434	hsa-miR-635	CLIP-seq
MIRT2096021	hsa-miR-644	CLIP-seq
MIRT2096022	hsa-miR-654-5p	CLIP-seq
MIRT2096023	hsa-miR-663b	CLIP-seq
MIRT2096024	hsa-miR-665	CLIP-seq
MIRT2096025	hsa-miR-668	CLIP-seq
MIRT2096026	hsa-miR-762	CLIP-seq
MIRT2096027	hsa-miR-766	CLIP-seq
MIRT1323440	hsa-miR-885-3p	CLIP-seq
MIRT2096028	hsa-miR-920	CLIP-seq
MIRT1323442	hsa-miR-939	CLIP-seq
MIRT2096029	hsa-miR-940	CLIP-seq
MIRT1323250	hsa-miR-1205	CLIP-seq
MIRT1323251	hsa-miR-1207-3p	CLIP-seq
MIRT1323252	hsa-miR-1207-5p	CLIP-seq
MIRT1323253	hsa-miR-1225-3p	CLIP-seq
MIRT2320303	hsa-miR-1226	CLIP-seq
MIRT1323255	hsa-miR-124	CLIP-seq
MIRT2320304	hsa-miR-1245b-3p	CLIP-seq
MIRT2095900	hsa-miR-1246	CLIP-seq
MIRT2320305	hsa-miR-1256	CLIP-seq
MIRT2320306	hsa-miR-1285	CLIP-seq
MIRT1323262	hsa-miR-130a	CLIP-seq
MIRT1323263	hsa-miR-130b	CLIP-seq
MIRT1323264	hsa-miR-1321	CLIP-seq
MIRT1323265	hsa-miR-1324	CLIP-seq
MIRT2095907	hsa-miR-141	CLIP-seq
MIRT1323268	hsa-miR-145	CLIP-seq
MIRT2320307	hsa-miR-146b-3p	CLIP-seq
MIRT1323270	hsa-miR-148a	CLIP-seq
MIRT1323271	hsa-miR-148b	CLIP-seq
MIRT1323272	hsa-miR-150	CLIP-seq
MIRT1323273	hsa-miR-152	CLIP-seq
MIRT2320308	hsa-miR-155	CLIP-seq
MIRT1323274	hsa-miR-1825	CLIP-seq
MIRT1323277	hsa-miR-191	CLIP-seq
MIRT1323279	hsa-miR-1972	CLIP-seq
MIRT1323280	hsa-miR-199a-5p	CLIP-seq
MIRT1323281	hsa-miR-199b-5p	CLIP-seq
MIRT1323282	hsa-miR-19a	CLIP-seq
MIRT1323283	hsa-miR-19b	CLIP-seq
MIRT2095912	hsa-miR-200a	CLIP-seq
MIRT2095916	hsa-miR-2278	CLIP-seq
MIRT1323291	hsa-miR-301a	CLIP-seq
MIRT1323292	hsa-miR-301b	CLIP-seq
MIRT1323293	hsa-miR-3064-5p	CLIP-seq
MIRT1323294	hsa-miR-3120-3p	CLIP-seq
MIRT1323295	hsa-miR-3121-3p	CLIP-seq
MIRT1323300	hsa-miR-3155	CLIP-seq
MIRT1323301	hsa-miR-3155b	CLIP-seq
MIRT2095924	hsa-miR-3173-3p	CLIP-seq
MIRT2320309	hsa-miR-3173-5p	CLIP-seq
MIRT1323308	hsa-miR-3183	CLIP-seq
MIRT2320310	hsa-miR-3187-5p	CLIP-seq
MIRT1323310	hsa-miR-3189-5p	CLIP-seq
MIRT1556998	hsa-miR-3194-5p	CLIP-seq
MIRT2095928	hsa-miR-3195	CLIP-seq
MIRT2095930	hsa-miR-320a	CLIP-seq
MIRT2095931	hsa-miR-320b	CLIP-seq
MIRT2095932	hsa-miR-320c	CLIP-seq
MIRT2095933	hsa-miR-320d	CLIP-seq
MIRT1323314	hsa-miR-338-3p	CLIP-seq
MIRT2095938	hsa-miR-3591-3p	CLIP-seq
MIRT2095942	hsa-miR-3652	CLIP-seq
MIRT1323319	hsa-miR-3666	CLIP-seq
MIRT2320311	hsa-miR-3692	CLIP-seq
MIRT2095944	hsa-miR-3714	CLIP-seq
MIRT2095946	hsa-miR-3910	CLIP-seq
MIRT1323322	hsa-miR-3918	CLIP-seq
MIRT1323328	hsa-miR-4261	CLIP-seq
MIRT1323329	hsa-miR-4267	CLIP-seq
MIRT1323330	hsa-miR-4269	CLIP-seq
MIRT2095956	hsa-miR-4276	CLIP-seq
MIRT2095959	hsa-miR-4292	CLIP-seq
MIRT1323335	hsa-miR-4295	CLIP-seq
MIRT1323336	hsa-miR-4297	CLIP-seq
MIRT1323337	hsa-miR-4323	CLIP-seq
MIRT1323338	hsa-miR-4324	CLIP-seq
MIRT2320312	hsa-miR-4326	CLIP-seq
MIRT2095966	hsa-miR-4429	CLIP-seq
MIRT2095967	hsa-miR-4430	CLIP-seq
MIRT2095968	hsa-miR-4435	CLIP-seq
MIRT739035	hsa-miR-4436b-3p	CLIP-seq
MIRT1323341	hsa-miR-4438	CLIP-seq
MIRT1323343	hsa-miR-4459	CLIP-seq
MIRT2095973	hsa-miR-4468	CLIP-seq
MIRT2095975	hsa-miR-4490	CLIP-seq
MIRT2095976	hsa-miR-4492	CLIP-seq
MIRT2320313	hsa-miR-4496	CLIP-seq
MIRT2095977	hsa-miR-4498	CLIP-seq
MIRT1323350	hsa-miR-4505	CLIP-seq
MIRT1323351	hsa-miR-4509	CLIP-seq
MIRT1323353	hsa-miR-4512	CLIP-seq
MIRT1323354	hsa-miR-4514	CLIP-seq
MIRT1323356	hsa-miR-454	CLIP-seq
MIRT2320314	hsa-miR-4640-5p	CLIP-seq
MIRT1323357	hsa-miR-4645-5p	CLIP-seq
MIRT1323365	hsa-miR-4673	CLIP-seq
MIRT2095991	hsa-miR-4685-5p	CLIP-seq
MIRT2095992	hsa-miR-4690-3p	CLIP-seq
MIRT1323370	hsa-miR-4692	CLIP-seq
MIRT2095996	hsa-miR-4715-3p	CLIP-seq
MIRT2095997	hsa-miR-4717-5p	CLIP-seq
MIRT1323377	hsa-miR-4723-3p	CLIP-seq
MIRT2320315	hsa-miR-4726-5p	CLIP-seq
MIRT1323378	hsa-miR-4728-5p	CLIP-seq
MIRT1323381	hsa-miR-4733-3p	CLIP-seq
MIRT2096000	hsa-miR-4738-5p	CLIP-seq
MIRT1323382	hsa-miR-4739	CLIP-seq
MIRT1323384	hsa-miR-4744	CLIP-seq
MIRT1323389	hsa-miR-4756-5p	CLIP-seq
MIRT1323391	hsa-miR-4763-3p	CLIP-seq
MIRT1323392	hsa-miR-4766-5p	CLIP-seq
MIRT1323394	hsa-miR-4779	CLIP-seq
MIRT1323395	hsa-miR-4793-5p	CLIP-seq
MIRT2096007	hsa-miR-483-3p	CLIP-seq
MIRT1323397	hsa-miR-484	CLIP-seq
MIRT1323399	hsa-miR-506	CLIP-seq
MIRT2096012	hsa-miR-508-5p	CLIP-seq
MIRT1323404	hsa-miR-512-5p	CLIP-seq
MIRT1323405	hsa-miR-513a-5p	CLIP-seq
MIRT2096017	hsa-miR-544b	CLIP-seq
MIRT1323409	hsa-miR-548a-5p	CLIP-seq
MIRT1323410	hsa-miR-548aa	CLIP-seq
MIRT1323411	hsa-miR-548ab	CLIP-seq
MIRT1323412	hsa-miR-548ak	CLIP-seq
MIRT1323413	hsa-miR-548b-5p	CLIP-seq
MIRT1323414	hsa-miR-548c-3p	CLIP-seq
MIRT1323415	hsa-miR-548c-5p	CLIP-seq
MIRT1323416	hsa-miR-548d-5p	CLIP-seq
MIRT1323417	hsa-miR-548h	CLIP-seq
MIRT1323418	hsa-miR-548i	CLIP-seq
MIRT1323419	hsa-miR-548j	CLIP-seq
MIRT1323420	hsa-miR-548k	CLIP-seq
MIRT1323421	hsa-miR-548l	CLIP-seq
MIRT1323423	hsa-miR-548w	CLIP-seq
MIRT1323424	hsa-miR-548y	CLIP-seq
MIRT1323429	hsa-miR-559	CLIP-seq
MIRT1323430	hsa-miR-570	CLIP-seq
MIRT2320316	hsa-miR-576-5p	CLIP-seq
MIRT2320317	hsa-miR-612	CLIP-seq
MIRT1323433	hsa-miR-634	CLIP-seq
MIRT1323437	hsa-miR-664	CLIP-seq
MIRT2096025	hsa-miR-668	CLIP-seq
MIRT2096026	hsa-miR-762	CLIP-seq
MIRT2320318	hsa-miR-874	CLIP-seq
MIRT2096029	hsa-miR-940	CLIP-seq
MIRT2320309	hsa-miR-3173-5p	CLIP-seq
MIRT2095938	hsa-miR-3591-3p	CLIP-seq
MIRT2095944	hsa-miR-3714	CLIP-seq
MIRT1323327	hsa-miR-4252	CLIP-seq
MIRT739035	hsa-miR-4436b-3p	CLIP-seq
MIRT1323346	hsa-miR-4476	CLIP-seq
MIRT1323358	hsa-miR-4646-5p	CLIP-seq
MIRT1323369	hsa-miR-4691-3p	CLIP-seq
MIRT1323385	hsa-miR-4747-5p	CLIP-seq
MIRT1323396	hsa-miR-4795-5p	CLIP-seq
MIRT739035	hsa-miR-4436b-3p	CLIP-seq
MIRT739035	hsa-miR-4436b-3p	CLIP-seq

Transcription factors

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Transcription factor	Regulation	Reference
NR1I2	Unknown	21295138

Show/Hide all(81)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000122	Process	Negative regulation of transcription by RNA polymerase II	IDA	17426122
GO:0000785	Component	Chromatin	IDA	9267036
GO:0000785	Component	Chromatin	IDA	18511497, 25592151
GO:0000785	Component	Chromatin	ISA
GO:0000976	Function	Transcription cis-regulatory region binding	IDA	18511497
GO:0000977	Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IDA	7831303
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	12037571
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	ISA
GO:0001221	Function	Transcription coregulator binding	IPI	14701856
GO:0001972	Function	Retinoic acid binding	IDA	18690216, 19043829
GO:0002157	Process	Positive regulation of thyroid hormone receptor signaling pathway	IDA	1310350, 26289479
GO:0003677	Function	DNA binding	IEA
GO:0003690	Function	Double-stranded DNA binding	IMP	19043829
GO:0003700	Function	DNA-binding transcription factor activity	IDA	12037571, 17426122
GO:0003700	Function	DNA-binding transcription factor activity	IEA
GO:0003707	Function	Nuclear steroid receptor activity	IEA
GO:0004879	Function	Nuclear receptor activity	IBA
GO:0004879	Function	Nuclear receptor activity	IDA	1651173, 7990953, 9267036, 9568716, 20219900, 25592151
GO:0004879	Function	Nuclear receptor activity	TAS	1310260
GO:0005515	Function	Protein binding	IPI	9653119, 10428834, 10866662, 11915042, 12040021, 15722453, 16769902, 17363140, 17426122, 17641689, 17673910, 17947383, 19047629, 19345331, 19786558, 19917671, 20211142, 20219900, 20541701, 20682316, 21220114, 21478865, 21988832, 22179700, 22474364, 23602807, 24561505, 25241761, 2530
GO:0005634	Component	Nucleus	IDA	7990953, 19917671
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IEA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005667	Component	Transcription regulator complex	IPI	10698945, 20682316, 21152046, 23602807, 26820900
GO:0005737	Component	Cytoplasm	IEA
GO:0005739	Component	Mitochondrion	IEA
GO:0005829	Component	Cytosol	TAS
GO:0006355	Process	Regulation of DNA-templated transcription	IEA
GO:0007399	Process	Nervous system development	IBA
GO:0008270	Function	Zinc ion binding	IDA	19043829
GO:0008270	Function	Zinc ion binding	IEA
GO:0009755	Process	Hormone-mediated signaling pathway	IDA	7744246
GO:0009755	Process	Hormone-mediated signaling pathway	ISS
GO:0010875	Process	Positive regulation of cholesterol efflux	TAS	23990020
GO:0019899	Function	Enzyme binding	IPI	12039952
GO:0030154	Process	Cell differentiation	IBA
GO:0030224	Process	Monocyte differentiation	IDA	9568716
GO:0030501	Process	Positive regulation of bone mineralization	NAS	27184385
GO:0030518	Process	Nuclear receptor-mediated steroid hormone signaling pathway	IEA
GO:0032526	Process	Response to retinoic acid	IMP	17538076
GO:0035357	Process	Peroxisome proliferator activated receptor signaling pathway	IDA	9568716, 10195690
GO:0042277	Function	Peptide binding	IDA	19043829
GO:0042789	Process	MRNA transcription by RNA polymerase II	IDA	1309942, 1310350, 1310351, 7744246, 20171278, 26289479
GO:0042789	Process	MRNA transcription by RNA polymerase II	ISS
GO:0042789	Process	MRNA transcription by RNA polymerase II	NAS	9430642
GO:0042802	Function	Identical protein binding	IPI	7831303
GO:0042809	Function	Nuclear vitamin D receptor binding	IPI	17426122
GO:0043235	Component	Receptor complex	IDA	17426122, 19043829
GO:0043565	Function	Sequence-specific DNA binding	IDA	11915042
GO:0043565	Function	Sequence-specific DNA binding	IEA
GO:0044323	Function	Retinoic acid-responsive element binding	IBA
GO:0044323	Function	Retinoic acid-responsive element binding	IDA	19917671, 25592151
GO:0045834	Process	Positive regulation of lipid metabolic process	TAS	9568716
GO:0045893	Process	Positive regulation of DNA-templated transcription	IDA	1651173
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	IBA
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	IDA	9568716
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	IDA	12037571
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	IDA	1309942, 1310350, 7744246, 9430642, 20171278, 20219900, 25592151, 26289479
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	ISS
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	NAS	23602807
GO:0046872	Function	Metal ion binding	IEA
GO:0048384	Process	Retinoic acid receptor signaling pathway	IBA
GO:0048384	Process	Retinoic acid receptor signaling pathway	IDA	9267036, 19917671
GO:0048384	Process	Retinoic acid receptor signaling pathway	IDA	1309942, 9267036
GO:0048384	Process	Retinoic acid receptor signaling pathway	IMP	17538076
GO:0048469	Process	Cell maturation	IDA	9568716
GO:0050692	Function	DNA binding domain binding	IDA	19043829
GO:0050693	Function	LBD domain binding	IDA	19043829
GO:0070564	Process	Positive regulation of vitamin D receptor signaling pathway	IDA	20171278
GO:0070644	Function	Vitamin D response element binding	IDA	17426122
GO:0071404	Process	Cellular response to low-density lipoprotein particle stimulus	IDA	9568716
GO:0071630	Process	Nuclear protein quality control by the ubiquitin-proteasome system	IDA	37478846
GO:0090575	Component	RNA polymerase II transcription regulator complex	EXP	19167885, 22474364
GO:0090575	Component	RNA polymerase II transcription regulator complex	IBA
GO:0090575	Component	RNA polymerase II transcription regulator complex	IDA	1310351, 9568716, 17426122, 18511497, 26289479
GO:0090575	Component	RNA polymerase II transcription regulator complex	IPI	10669605, 22179700
GO:0090575	Component	RNA polymerase II transcription regulator complex	ISS
GO:0090575	Component	RNA polymerase II transcription regulator complex	NAS	9430642
GO:0140077	Process	Positive regulation of lipoprotein transport	IDA	9568716
GO:1990837	Function	Sequence-specific double-stranded DNA binding	IDA	28473536

MIM	HGNC	e!Ensembl
180245	10477	ENSG00000186350

Protein

UniProt ID

P19793

Protein name

Retinoic acid receptor RXR-alpha (Nuclear receptor subfamily 2 group B member 1) (Retinoid X receptor alpha)

Protein function

Receptor for retinoic acid that acts as a transcription factor (PubMed:10874028, PubMed:11162439, PubMed:11915042, PubMed:37478846). Forms homo- or heterodimers with retinoic acid receptors (RARs) and binds to target response elements in respons

PDB

1BY4 , 1DSZ , 1FBY , 1FM6 , 1FM9 , 1G1U , 1G5Y , 1K74 , 1MV9 , 1MVC , 1MZN , 1R0N , 1RDT , 1RXR , 1XLS , 1XV9 , 1XVP , 1YNW , 2ACL , 2NLL , 2P1T , 2P1U , 2P1V , 2ZXZ , 2ZY0 , 3DZU , 3DZY , 3E00 , 3E94 , 3FAL , 3FC6 , 3FUG , 3H0A , 3KWY , 3NSP , 3NSQ , 3OAP , 3OZJ , 3PCU , 3R29 , 3R2A , 3R5M , 3UVV , 4CN2 , 4CN3 , 4CN5 , 4CN7 , 4J5W , 4J5X , 4K4J , 4K6I

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF11825	Nuc_recep-AF1	17 → 127	Nuclear/hormone receptor activator site AF-1	Family
PF00105	zf-C4	133 → 202	Zinc finger, C4 type (two domains)	Domain
PF00104	Hormone_recep	257 → 442	Ligand-binding domain of nuclear hormone receptor	Domain

Tissue specificity

TISSUE SPECIFICITY: Expressed in lung fibroblasts (at protein level) (PubMed:30216632). Expressed in monocytes (PubMed:26463675). Highly expressed in liver, also found in kidney and brain (PubMed:14702039, PubMed:2159111, PubMed:24275569). {ECO:0000269|Pu

Sequence

MDTKHFLPLDFSTQVNSSLTSPTGRGSMAAPSLHPSLGPGIGSPGQLHSPISTLSSPING
MGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKVP
AHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLID
KRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVERILEAEL
AVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVIL
LRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDM
QMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLL
RLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT

Sequence length

462

Interactions

View interactions

	KEGG		Reactome
	PPAR signaling pathway Efferocytosis PI3K-Akt signaling pathway Th17 cell differentiation Thyroid hormone signaling pathway Adipocytokine signaling pathway Parathyroid hormone synthesis, secretion and action Non-alcoholic fatty liver disease Bile secretion Hepatitis C Pathways in cancer Transcriptional misregulation in cancer Chemical carcinogenesis - receptor activation Thyroid cancer Small cell lung cancer Non-small cell lung cancer Gastric cancer Lipid and atherosclerosis		RORA activates gene expression Recycling of bile acids and salts Synthesis of bile acids and bile salts Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol Synthesis of bile acids and bile salts via 27-hydroxycholesterol PPARA activates gene expression Carnitine metabolism Regulation of pyruvate dehydrogenase (PDH) complex Endogenous sterols Transcriptional activation of mitochondrial biogenesis Activation of gene expression by SREBF (SREBP) Transcriptional regulation of white adipocyte differentiation Nuclear Receptor transcription pathway Regulation of lipid metabolism by PPARalpha Circadian Clock SUMOylation of intracellular receptors Signaling by Retinoic Acid NR1H2 & NR1H3 regulate gene expression linked to lipogenesis NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux NR1H2 & NR1H3 regulate gene expression to limit cholesterol uptake NR1H2 & NR1H3 regulate gene expression linked to triglyceride lipolysis in adipose Transcriptional regulation of granulopoiesis NR1H2 & NR1H3 regulate gene expression to control bile acid homeostasis NR1H2 & NR1H3 regulate gene expression linked to gluconeogenesis

Show/Hide Causal Diseases (1)

Disease merge term	Disease name	dbSNP ID	References
Causal Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
Multiple myeloma	multiple myeloma	rs1588299621	N/A

Show/Hide Unknown Diseases (2)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Crohn Disease	Crohn's disease (need for surgery)	N/A	N/A	GWAS
Keratoconus	Keratoconus	N/A	N/A	GWAS

Show/Hide Text Mining Associations (143)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Abortion Habitual	Stimulate	28076928
Abortion Spontaneous	Stimulate	28076928
Acute Kidney Injury	Associate	36443310
Adenomatous Polyposis Coli	Associate	12771132
Adenomyosis	Associate	17296180
Alzheimer Disease	Associate	19374686
Amaurosis Fugax	Associate	21709632
Aniridia	Associate	34827649
Arthritis Rheumatoid	Associate	28335003, 29848990
Atherosclerosis	Associate	14534304, 36613720
Atherosclerosis	Inhibit	24391011
Autoimmune Diseases	Associate	28335003
Breast Neoplasms	Associate	12841681, 15082790, 15318936, 18565212, 19644018, 23180655, 25013807, 25328014, 25778982, 25833198, 26310932, 27530324, 30857277, 33478016, 34239022, 35406808, 36930833, 9343423 View all (3 more)
Breast Neoplasms	Stimulate	28427429
Carcinogenesis	Associate	22205725, 22948024, 24103747, 26156677
Carcinoma Adenoid Cystic	Associate	37040084
Carcinoma Ductal Breast	Associate	18565212
Carcinoma Hepatocellular	Associate	17604322, 17900311, 23317196, 23690070, 24103747, 34861383, 35712812
Carcinoma Intraductal Noninfiltrating	Associate	11092983
Carcinoma Renal Cell	Associate	19753122
Carcinoma Squamous Cell	Associate	11077050
Cardiomyopathies	Associate	37542511
Cardiomyopathy Hypertrophic	Associate	33757590
Cardiovascular Diseases	Associate	33055159
Carotid Artery Diseases	Associate	21709632
Carotid Stenosis	Associate	21709632
Cell Transformation Neoplastic	Associate	26156677
Chediak Higashi Syndrome	Associate	31139831
Cholangiocarcinoma	Associate	26310932
Cholestasis	Associate	25798860
Colonic Diseases	Associate	20145122
Colonic Neoplasms	Associate	25171473
Colonic Neoplasms	Inhibit	27167203
Colorectal Neoplasms	Associate	12771132, 17604322, 18196974, 20558521, 22108803, 25171473, 26450852, 27167203, 29740162, 33472949, 37246895, 7883226
Colorectal Neoplasms	Stimulate	20558521
Coronary Disease	Associate	20855565
COVID 19	Associate	36918693
Crohn Disease	Associate	28335003
Cystic Fibrosis	Associate	33050003
Diabetes Complications	Associate	22180072
Diabetes Gestational	Associate	27636996, 34633445
Diabetes Mellitus	Associate	9065481
Diabetes Mellitus Type 2	Associate	14534304, 22023374, 29057944
Diabetic Retinopathy	Associate	22180072
DiGeorge Syndrome	Associate	35940635
Drug Related Side Effects and Adverse Reactions	Associate	28669525, 37040084
Dyslipidemias	Associate	22896670
Endometrial Neoplasms	Associate	22205725
Esophageal Squamous Cell Carcinoma	Associate	32194853
Esophagitis	Associate	11315258
Fatty Liver	Associate	25948673
Foramen Ovale Patent	Associate	23147404
Gallbladder Neoplasms	Associate	27167107
Glomerulonephritis	Associate	26610845
Granulomatosis with Polyangiitis	Associate	25939343
Head and Neck Neoplasms	Associate	36902107
Heart Failure	Associate	32154187
Hematologic Neoplasms	Associate	12149223
Hemolytic Uremic Syndrome	Inhibit	40108621
Hepatolenticular Degeneration	Associate	30709419
Hereditary Breast and Ovarian Cancer Syndrome	Associate	11092983
Herpes Zoster	Associate	27777363
HIV Infections	Inhibit	23106848
Hyperaldosteronism	Associate	27777363
Hyperlipoproteinemias	Associate	22023374
Hypertension	Inhibit	21709632
Hypertension	Associate	22023374
Hypertensive Retinopathy	Associate	22180072
Hypertriglyceridemia	Associate	12519787
Hypothyroidism	Associate	10194237, 37563580
Hypoxia	Inhibit	32978975
Inflammation	Inhibit	23690070, 24391011
Inflammation	Associate	27106679, 31173497, 31638178, 37542511
Inflammatory Bowel Diseases	Associate	28335003, 35275975
Intellectual Disability	Associate	29769320
Iron Overload	Stimulate	21114893
Keratoconus	Associate	26040312
Kidney Diseases	Associate	36443310
Kidney Neoplasms	Associate	29991691
Leukemia	Associate	10601023, 8634447
Leukemia Lymphoma Adult T Cell	Associate	18559673
Leukemia Myeloid	Associate	10068679, 11756188, 15026318, 16946489, 30225259, 8530518, 8634447
Leukemia Myeloid Acute	Associate	23823656, 32434928
Leukemia Plasma Cell	Associate	22508408
Leukemia Promyelocytic Acute	Associate	10601023, 10979971, 20159609, 8634447
Leukemia T Cell	Associate	11035054
Liposarcoma	Associate	8990192
Liver Cirrhosis Biliary	Associate	30528300
Liver Diseases	Associate	35246921
Liver Failure	Associate	17272513
Lymphohistiocytosis Hemophagocytic	Associate	21325597
Lymphoma T Cell	Associate	18559673
Lymphoma T Cell Cutaneous	Associate	10194237, 12149223, 19791803, 21649908, 25826424, 28370539, 29599065, 35778597
Lymphoma T Cell Cutaneous	Inhibit	37947652
Macrophage Activation Syndrome	Associate	22002519
Macular Degeneration	Associate	26883505
Marijuana Abuse	Associate	34500744
Melanoma	Associate	30200275, 9228081
Melanoma Cutaneous Malignant	Associate	26575331
Metabolic Diseases	Associate	22140563
Metabolic Syndrome	Inhibit	24060638
Metabolic Syndrome	Associate	29057944
Multiple Myeloma	Associate	25669983
Mycosis Fungoides	Associate	33299887
Myocardial Infarction	Associate	30413149
Neoplasm Metastasis	Inhibit	12006550
Neoplasms	Inhibit	10389997, 20145122, 20799942, 23605322, 25141867
Neoplasms	Associate	15140235, 17900311, 19644018, 20145122, 20558521, 22205725, 26156677, 26310932, 26898458, 30176882, 30651555, 30893778, 33187070, 33352140, 33390794 View all (6 more)
Neoplasms Adipose Tissue	Associate	21471513, 23907847
Neoplasms Second Primary	Associate	21292633
Neoplastic Syndromes Hereditary	Associate	16936639
Nephrotic Syndrome	Associate	26610845
Neurodegenerative Diseases	Associate	26883505, 33187070
Non Muscle Invasive Bladder Neoplasms	Associate	33024200
Obesity	Associate	22023374, 22205725, 29454501
Obesity Metabolically Benign	Associate	27106679
Oligodendroglioma	Associate	8798469
Osteoarthritis	Associate	24286485
Osteosarcoma	Associate	12006550
Ovarian Neoplasms	Associate	31865146, 38143770
Overweight	Associate	22023374
Pancreatic Neoplasms	Associate	23826131, 28573829, 31210298
Pneumonia Aspiration	Associate	30225259
Polycystic Ovary Syndrome	Associate	31173497
Prostatitis	Associate	12514092, 26310932
Rectal Neoplasms	Associate	20558521
Retinoblastoma	Associate	9260893
Rhabdomyosarcoma	Associate	25915942
Sezary Syndrome	Associate	15245439
Sjogren's Syndrome	Associate	19404300
Sleep Wake Disorders	Associate	31139831
Sleepiness	Associate	31139831
Squamous Cell Carcinoma of Head and Neck	Associate	10738115
Stomach Neoplasms	Associate	11044367, 12970875, 22901127, 23605322
Stomach Neoplasms	Stimulate	26898458
Thyroid cancer follicular	Associate	33009242
Thyroid Neoplasms	Associate	26310932
Thyroid Neoplasms	Inhibit	33009242
Urinary Bladder Neoplasms	Associate	26901314, 30651555
Uterine Cervical Neoplasms	Associate	21736279
Vasospasm Intracranial	Associate	31595394
Vitamin D Deficiency	Associate	25171473
Zinc Deficiency Neonatal due to Low Breast Milk Zinc	Inhibit	24029070

RXRA (retinoid X receptor alpha)