Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
|
6046
|
Gene name
Gene Name - the full gene name approved by the HGNC.
|
Bromodomain containing 2 |
Gene symbol
Gene Symbol - the official gene symbol approved by the HGNC.
|
BRD2 |
Synonyms (NCBI Gene)
Gene synonyms aliases
|
BRD2-IT1, D6S113E, FSH, FSHRG1, FSRG1, NAT, O27.1.1, RING3, RNF3 |
Chromosome
Chromosome number
|
6 |
Chromosome location
Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
|
6p21.32 |
Summary
Summary of gene provided in NCBI Entrez Gene.
|
This gene encodes a transcriptional regulator that belongs to the BET (bromodomains and extra terminal domain) family of proteins. This protein associates with transcription complexes and with acetylated chromatin during mitosis, and it selectively binds |
UniProt ID |
P25440
|
Protein name |
Bromodomain-containing protein 2 (O27.1.1) |
Protein function |
Chromatin reader protein that specifically recognizes and binds histone H4 acetylated at 'Lys-5' and 'Lys-12' (H4K5ac and H4K12ac, respectively), thereby controlling gene expression and remodeling chromatin structures (PubMed:17148447, PubMed:17 |
PDB |
1X0J
,
2DVQ
,
2DVR
,
2DVS
,
2DVV
,
2E3K
,
2G4A
,
2YDW
,
2YEK
,
3AQA
,
3ONI
,
4A9E
,
4A9F
,
4A9H
,
4A9I
,
4A9J
,
4A9M
,
4A9N
,
4A9O
,
4AKN
,
4ALG
,
4ALH
,
4J1P
,
4MR5
,
4MR6
,
4QEU
,
4QEV
,
4QEW
,
4UYF
,
4UYG
,
4UYH
,
5BT5
,
5DFB
,
5DFC
,
5DFD
,
5DW1
,
5EK9
,
5HEL
,
5HEM
,
5HEN
,
5HFQ
,
5IBN
,
5IG6
,
5N2L
,
5O38
,
5O39
,
5O3A
,
5O3B
,
5O3C
,
5O3D
,
5O3E
|
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00439
|
Bromodomain |
83 → 168 |
Bromodomain |
Domain |
PF00439
|
Bromodomain |
353 → 441 |
Bromodomain |
Domain |
PF17035
|
BET |
641 → 705 |
Bromodomain extra-terminal - transcription regulation |
Domain |
|
Sequence |
|
Sequence length |
801 |
Interactions |
View interactions
|
Causal |
Disease term |
Disease name |
dbSNP ID |
References |
Gastric cancer |
Gastric Adenocarcinoma |
rs137854571, rs63751108, rs34612342, rs121908383, rs121909144, rs121909775, rs121909219, rs121909223, rs63750871, rs80359530, rs121964873, rs121913530, rs606231203, rs121918505, rs587776802, rs28933369, rs121912469, rs80358011, rs397507262, rs80359439, rs397507333, rs80359543, rs80358831, rs80359596, rs80358920, rs80358972, rs80359659, rs397507404, rs397514661, rs80359516, rs200495564, rs80358419, rs80359274, rs80359283, rs80358427, rs80358428, rs80358435, rs81002805, rs397507660, rs397507663, rs80359391, rs80359443, rs81002797, rs80359466, rs397507752, rs80359484, rs80359603, rs397507954, rs80359058, rs80359071, rs397507981, rs80359121, rs80357086, rs80357064, rs397508936, rs80357695, rs80357661, rs397509035, rs80357544, rs80357577, rs80357881, rs80357296, rs80356923, rs80356866, rs80357504, rs80357390, rs80357239, rs80358099, rs397509284, rs80357258, rs199474738, rs199474747, rs587779204, rs63750439, rs267608076, rs587779246, rs63749999, rs267608078, rs63751327, rs267607719, rs267607734, rs63750706, rs63751711, rs587779047, rs587779075, rs267607949, rs63750633, rs63750803, rs63751618, rs267608154, rs200640585, rs80358018, rs80357857, rs80357882, rs180177103, rs587779815, rs587779865, rs587779872, rs587780059, rs121912666, rs587780088, rs587780104, rs200432447, rs180177100, rs587780226, rs587780784, rs587776416, rs587781276, rs587781629, rs587781694, rs587781727, rs587781730, rs587781807, rs587781894, rs587781948, rs121913344, rs587782292, rs587782350, rs587782558, rs587782719, rs587782885, rs587783057, rs730881833, rs730881411, rs730881336, rs139770721, rs730881869, rs730881633, rs730882007, rs786203115, rs765123255, rs1553333738, rs762083530, rs786202800, rs17174393, rs55996097, rs750621215, rs786203451, rs747604569, rs764389018, rs786204433, rs786204862, rs772821016, rs779582317, rs863225406, rs193922343, rs759965045, rs63749919, rs760228510, rs746481984, rs762307622, rs876659736, rs876660933, rs747727055, rs1450394308, rs876658348, rs876658431, rs876659326, rs876660444, rs730881369, rs878853865, rs753862052, rs587780024, rs138941496, rs886040739, rs886040744, rs886040347, rs878854957, rs886040123, rs398122662, rs886040942, rs1057517104, rs1057516320, rs1057516683, rs879254046, rs1057517253, rs587781927, rs985033810, rs1057519989, rs775464903, rs374230313, rs758304323, rs1060501599, rs758081262, rs1060500126, rs1060502734, rs587776408, rs1060501695, rs1114167816, rs1114167596, rs1114167667, rs1555460315, rs1135402788, rs1554086196, rs730881919, rs773356478, rs769237459, rs1553653158, rs587782087, rs1555107263, rs1555119940, rs1403784434, rs1342519012, rs751710099, rs1553616361, rs1553619721, rs1270783041, rs775036118, rs1555288557, rs1555460548, rs1555461154, rs1298667185, rs1553622218, rs63751101, rs1349928568, rs771936821, rs1021662947, rs1555921011, rs81002831, rs1555124506, rs1555574803, rs1060502716, rs1555605362, rs747057367, rs1565385010, rs1567554500, rs1567516230, rs1558644995, rs1555591308, rs778306619, rs1566231194, rs1603328466, rs1570406302, rs1586108714, rs768362387, rs1597713777, rs1060502926, rs1597867185, rs1591517571, rs1591663236, rs1593903006, rs1555284779, rs1597096243, rs45459799, rs1597360340, rs587781905, rs864622481, rs1601753141, rs1966858562, rs1966967065, rs1967016153, rs1967113484, rs2080473458, rs1591387978, rs1224428422, rs1597747184, rs2082309297, rs2051929740, rs147542208 View all (244 more) |
|
Glioblastoma |
Glioblastoma, Glioblastoma Multiforme |
rs121913500, rs886042842, rs1555138291, rs1558518449, rs1567176006, rs1558650888 |
27388964 |
Inflammatory bowel disease |
Inflammatory Bowel Diseases |
rs137853579, rs137853580, rs121909601, rs149491038, rs368287711, rs387907326, rs587777338, rs758439420, rs1329427406, rs1264862631, rs1192830343, rs1373354533, rs1419560997, rs1591263883, rs1989014468 |
28008999 |
Medulloblastoma |
Medulloblastoma, Childhood Medulloblastoma, Adult Medulloblastoma, Desmoplastic Medulloblastoma, Melanotic medulloblastoma |
rs1589970134, rs587776578, rs587776579, rs17847577, rs111033171, rs80359604, rs80358785, rs80358814, rs863224925, rs1555950011, rs1554231278, rs926177767, rs759412460, rs1564032829, rs761911009 |
24231268 |
Multiple sclerosis |
Multiple Sclerosis |
rs104895219, rs483353022, rs483353023, rs483353028, rs483353029, rs483353024, rs483353030, rs3207617, rs483353031, rs483353032, rs483353033, rs483353034, rs483353035, rs483353036, rs483353039, rs483353038, rs61731956, rs568165874, rs767480544 View all (4 more) |
17660530 |
|
Unknown |
Disease term |
Disease name |
Evidence |
References |
Source |
Crohn disease |
Crohn Disease |
|
28008999 |
ClinVar |
Crohn Disease |
Crohn Disease |
|
|
GWAS |
Ulcerative colitis |
Ulcerative colitis |
|
|
GWAS |
Inflammatory Bowel Disease |
Inflammatory Bowel Disease |
|
|
GWAS |
Asthma |
Asthma |
|
|
GWAS |
Sarcoidosis |
Sarcoidosis |
|
|
GWAS |
Psoriasis |
Psoriasis |
|
|
GWAS |
Oligodendroglioma |
Oligodendroglioma |
|
|
GWAS |
|
Associations from Text Mining |
Disease Name |
Relationship Type |
References |
Abnormalities Drug Induced |
Associate
|
21608014 |
Adrenocortical Carcinoma |
Associate
|
36793283 |
Aphasia Broca |
Associate
|
36818472 |
Arthritis Rheumatoid |
Associate
|
27898717, 33717143 |
Azoospermia |
Associate
|
32860660 |
Bipolar Disorder |
Associate
|
33168801 |
Breast Neoplasms |
Associate
|
15743503, 25001387, 30952871, 33099470 |
Carcinoma Ovarian Epithelial |
Associate
|
31043489 |
Carcinoma Pancreatic Ductal |
Associate
|
28096419 |
Colitis Ulcerative |
Associate
|
28008999 |
Colorectal Neoplasms |
Associate
|
15015580, 18990750 |
COVID 19 |
Associate
|
34176789, 35027731, 36818472 |
Diabetes Mellitus Type 2 |
Associate
|
26409796 |
Epilepsy |
Associate
|
21608014 |
Epilepsy Idiopathic Generalized |
Associate
|
12830434 |
Hematologic Neoplasms |
Associate
|
24435449 |
HIV Infections |
Associate
|
23255218 |
Infertility Male |
Associate
|
32860660 |
Inflammation |
Associate
|
31300040, 33717143 |
Inflammatory Bowel Diseases |
Associate
|
28008999 |
Leiomyosarcoma |
Stimulate
|
39273015 |
Leukemia |
Associate
|
15796204, 25989842 |
Lymphoma Non Hodgkin |
Associate
|
15725081 |
Lymphoma T Cell |
Associate
|
32459053 |
Melanoma |
Associate
|
26051178, 29149598 |
Multiple Sclerosis |
Associate
|
36755464 |
Myoclonic Epilepsy Juvenile |
Associate
|
12830434, 17437413, 29608786 |
Nasopharyngeal Carcinoma |
Stimulate
|
31270100 |
Nasopharyngeal Carcinoma |
Associate
|
31289279 |
Nasopharyngeal Neoplasms |
Associate
|
31270100 |
Neoplasm Metastasis |
Inhibit
|
34813359 |
Neoplasms |
Stimulate
|
16158187 |
Neoplasms |
Associate
|
25001387, 25804798, 26035625, 26080064, 28096419, 30952871, 36793283 |
Osteosarcoma |
Associate
|
15015580 |
Ovarian Hyperstimulation Syndrome |
Associate
|
29869218 |
Ovarian Neoplasms |
Associate
|
33509905 |
Parkinson Disease |
Associate
|
36813848 |
Precancerous Conditions |
Associate
|
26617241, 26840026, 8396914 |
Primary Myelofibrosis |
Associate
|
23872309 |
Prostatic Neoplasms |
Associate
|
35361883 |
Pulmonary Arterial Hypertension |
Associate
|
37516840 |
Sarcoidosis |
Associate
|
37399103 |
Seizures |
Associate
|
21608014 |
Seminoma |
Associate
|
16158187 |
Squamous Cell Carcinoma of Head and Neck |
Associate
|
34346116 |
Triple Negative Breast Neoplasms |
Associate
|
38073442 |
Tyrosine Kinase 2 Deficiency |
Associate
|
24435449 |
Urinary Bladder Neoplasms |
Associate
|
10507782, 8396914 |
|