Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
59344
Gene name Gene Name - the full gene name approved by the HGNC.
Arachidonate epidermal lipoxygenase 3
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ALOXE3
Synonyms (NCBI Gene) Gene synonyms aliases
ARCI3, E-LOX, LI5, eLOX-3, eLOX3
Disease Acronyms (UniProt) Disease acronyms from UniProt database
ARCI3
Chromosome Chromosome number
17
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
17p13.1
Summary Summary of gene provided in NCBI Entrez Gene.
This gene is a member of the lipoxygenase family, which are catabolized by arachidonic acid-derived compounds. The encoded enzyme is a hydroperoxide isomerase that synthesizes a unique type of epoxy alcohol (8R-hydroxy-11R,12R-epoxyeicosa-5Z,9E,14Z-trieno
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs121434232 C>A,T Pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs121434233 G>A Pathogenic Coding sequence variant, non coding transcript variant, stop gained
rs121434234 G>T Pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs139375856 T>C Pathogenic Splice acceptor variant, downstream transcript variant, genic downstream transcript variant
rs141340759 G>A Pathogenic Coding sequence variant, non coding transcript variant, stop gained
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT778925 hsa-miR-1255a CLIP-seq
MIRT778926 hsa-miR-1255b CLIP-seq
MIRT778927 hsa-miR-2110 CLIP-seq
MIRT778928 hsa-miR-3126-5p CLIP-seq
MIRT778929 hsa-miR-3150a-3p CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005506 Function Iron ion binding IEA
GO:0005515 Function Protein binding IPI 22622417, 32296183
GO:0005829 Component Cytosol TAS
GO:0006665 Process Sphingolipid metabolic process IDA 21558561
GO:0016702 Function Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IDA 20921226, 20923767
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
607206 13743 ENSG00000179148
Protein
UniProt ID Q9BYJ1
Protein name Hydroperoxide isomerase ALOXE3 (Epidermis-type lipoxygenase 3) (Epidermal LOX-3) (e-LOX-3) (eLOX-3) (Hydroperoxy dehydratase ALOXE3) (Hydroperoxy icosatetraenoate dehydratase) (EC 4.2.1.152) (Hydroperoxy icosatetraenoate isomerase) (EC 5.4.4.7)
Protein function Non-heme iron-containing lipoxygenase which is atypical in that it displays a prominent hydroperoxide isomerase activity and a reduced lipoxygenases activity (PubMed:12881489, PubMed:17045234, PubMed:20921226, PubMed:20923767). The hydroperoxide
PDB 6VB2
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01477 PLAT 4 113 PLAT/LH2 domain Domain
PF00305 Lipoxygenase 211 697 Lipoxygenase Domain
Tissue specificity TISSUE SPECIFICITY: Predominantly expressed in skin.
Sequence
Sequence length 711
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Arachidonic acid metabolism
Metabolic pathways
  Synthesis of 12-eicosatetraenoic acid derivatives
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Congenital ichthyosis Congenital ichthyosis, Collodion Fetus rs118203935, rs118203936, rs118203937, rs199422216, rs199422217, rs1561831582, rs28940268, rs28940269, rs28940568, rs28940270, rs387906284, rs387906285, rs137853289, rs267606622, rs121434232
View all (226 more)
21739938
Hypotrichosis Hypotrichosis rs121434306, rs121434307, rs121434308, rs121434309, rs1325804776, rs267606775, rs786200875, rs1568062215, rs267606776, rs1462595806, rs267606777, rs267606659, rs2147483647, rs559648418, rs121917819
View all (18 more)
Ichthyosis Ichthyoses rs199766569, rs587776996, rs587777262, rs863223405, rs370031870, rs1569044747, rs200806519
Ichthyosis with hypotrichosis ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 3, ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 2 rs1114167426, rs1114167425, rs1114167424, rs762765702, rs530109812, rs774363396, rs760309815, rs140526640, rs1303127476 19890349, 19131948, 16116617, 15629692, 25998749, 11773004
Unknown
Disease term Disease name Evidence References Source
Otitis media Chronic otitis media ClinVar
Congenital Ichthyosis autosomal recessive congenital ichthyosis 3 GenCC
Associations from Text Mining
Disease Name Relationship Type References
Alopecia Associate 26370990
Hyperkeratosis Epidermolytic Associate 26370990, 29935003
Ichthyosiform Erythroderma Congenital Associate 27025581
Ichthyosis Associate 27025581
Lamellar ichthyosis type 3 Associate 17139268, 19131948, 26578203, 30600594
Prostatic Neoplasms Associate 30678711
Self Healing Collodion Baby Associate 19890349
Skin Diseases Associate 26370990, 29130490
Trichophyton infection Associate 26370990