Gene Gene information from NCBI Gene database.
Entrez ID 59269
Gene name HIVEP zinc finger 3
Gene symbol HIVEP3
Synonyms (NCBI Gene)
KBP-1KBP1KRCSHN3Schnurri-3ZAS3ZNF40C
Chromosome 1
Chromosome location 1p34.2
Summary This gene encodes a member of the human immunodeficiency virus type 1 enhancer-binding protein family. Members of this protein family contain multiple zinc finger and acid-rich (ZAS) domains and serine-threonine rich regions. This protein acts as a transc
miRNA miRNA information provided by mirtarbase database.
350
miRTarBase ID miRNA Experiments Reference
MIRT050043 hsa-miR-26b-5p CLASH 23622248
MIRT047575 hsa-miR-10a-5p CLASH 23622248
MIRT725438 hsa-miR-6858-3p HITS-CLIP 19536157
MIRT725436 hsa-miR-4687-5p HITS-CLIP 19536157
MIRT725437 hsa-miR-4667-3p HITS-CLIP 19536157
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
13
GO ID Ontology Definition Evidence Reference
GO:0000978 Function RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0003677 Function DNA binding IEA
GO:0005515 Function Protein binding IPI 34341191
GO:0005634 Component Nucleus IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
606649 13561 ENSG00000127124
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q5T1R4
Protein name Transcription factor HIVEP3 (Human immunodeficiency virus type I enhancer-binding protein 3) (Kappa-B and V(D)J recombination signal sequences-binding protein) (Kappa-binding protein 1) (KBP-1) (Zinc finger protein ZAS3)
Protein function Plays a role of transcription factor; binds to recognition signal sequences (Rss heptamer) for somatic recombination of immunoglobulin and T-cell receptor gene segments; Also binds to the kappa-B motif of gene such as S100A4, involved in cell pr
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00096 zf-C2H2 192 214 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 220 242 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 1754 1776 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 1782 1806 Zinc finger, C2H2 type Domain
Sequence
MDPEQSVKGTKKAEGSPRKRLTKGEAIQTSVSSSVPYPGSGTAATQESPAQELLAPQPFP
GPSSVLREGSQEKTGQQQKPPKRPPIEASVHISQLPQHPLTPAFMSPGKPEHLLEGSTWQ
LVDPMRPGPSGSFVAPGLHPQSQLLPSHASIIPPEDLPGVPKVFVPRPSQVSLKPTEEAH
KKERKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRK
SH
AHRIKAGLASGMGGEMYPHGLEMERIPGEEFEEPTEGESTDSEEETSATSGHPAELSP
RPKQPLLSSGLYSSGSHSSSHERCSLSQSSTAQSLEDPPPFVEPSSEHPLSHKPEDTHTI
KQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQVSPPNTNAKSYAEIIFG
KCGRIGQRTAMLTATSTQPLLPLSTEDKPSLVPLSVPRTQVIEHITKLITINEAVVDTSE
IDSVKPRRSSLSRRSSMESPKSSLYREPLSSHSEKTKPEQSLLSLQHPPSTAPPVPLLRS
HSMPSAACTISTPHHPFRGSYSFDDHITDSEALSHSSHVFTSHPRMLKRQPAIELPLGGE
YSSEEPGPSSKDTASKPSDEVEPKESELTKKTKKGLKTKGVIYECNICGARYKKRDNYEA
HKKYYCSELQIAKPISAGTHTSPEAEKSQIEHEPWSQMMHYKLGTTLELTPLRKRRKEKS
LGDEEEPPAFESTKSQFGSPGPSDAARNLPLESTKSPAEPSKSVPSLEGPTGFQPRTPKP
GSGSESGKERRTTSKEISVIQHTSSFEKSDSLEQPSGLEGEDKPLAQFPSPPPAPHGRSA
HSLQPKLVRQPNIQVPEILVTEEPDRPDTEPEPPPKEPEKTEEFQWPQRSQTLAQLPAEK
LPPKKKRLRLAEMAQSSGESSFESSVPLSRSPSQESNVSLSGSSRSASFERDDHGKAEAP
SPSSDMRPKPLGTHMLTVPSHHPHAREMRRSASEQSPNVSHSAHMTETRSKSFDYGSLSL
TGPSAPAPVAPPARVAPPERRKCFLVRQASLSRPPESELEVAPKGRQESEEPQPSSSKPS
AKSSLSQISSAATSHGGPPGGKGPGQDRPPLGPTVPYTEALQVFHHPVAQTPLHEKPYLP
PPVSLFSFQHLVQHEPGQSPEFFSTQAMSSLLSSPYSMPPLPPSLFQAPPLPLQPTVLHP
GQLHLPQLMPHPANIPFRQPPSFLPMPYPTSSALSSGFFLPLQSQFALQLPGDVESHLPQ
IKTSLAPLATGSAGLSPSTEYSSDIRLPPVAPPASSSAPTSAPPLALPACPDTMVSLVVP
VRVQTNMPSYGSAMYTTLSQILVTQSQGSSATVALPKFEEPPSKGTTVCGADVHEVGPGP
SGLSEEQSRAFPTPYLRVPVTLPERKGTSLSSESILSLEGSSSTAGGSKRVLSPAGSLEL
TMETQQQKRVKEEEASKADEKLELVKPCSVVLTSTEDGKRPEKSHLGNQGQGRRELEMLS
SLSSDPSDTKEIPPLPHPALSHGTAPGSEALKEYPQPSGKPHRRGLTPLSVKKEDSKEQP
DLPSLAPPSSLPLSETSSRPAKSQEGTDSKKVLQFPSLHTTTNVSWCYLNYIKPNHIQHA
DRRSSVYAGWCISLYNPNLPGVSTKAALSLLRSKQKVSKETYTMATAPHPEAGRLVPSSS
RKPRMTEVHLPSLVSPEGQKDLARVEKEEERRGEPEEDAPASQRGEPARIKIFEGGYKSN
EEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKH
MKSKAH
SKKCQETGVLEELEAEEGTSDDLFQDSEGREGSEAVEEHQFSDLEDSDSDSDLD
EDEDEDEEESQDELSRPSSEAPPPGPPHALRADSSPILGPQPPDAPASGTEATRGSSVSE
AERLTASSCSMSSQSMPGLPWLGPAPLGSVEKDTGSALSYKPVSPRRPWSPSKEAGSRPP
LARKHSLTKNDSSPQRCSPAREPQASAPSPPGLHVDPGRGMGALPCGSPRLQLSPLTLCP
LGRELAPRAHVLSKLEGTTDPGLPRYSPTRRWSPGQAESPPRSAPPGKWALAGPGSPSAG
EHGPGLGLDPRVLFPPAPLPHKLLSRSPETCASPWQKAESRSPSCSPGPAHPLSSRPFSA
LHDFHGHILARTEENIFSHLPLHSQHLTRAPCPLIPIGGIQMVQARPGAHPTLLPGPTAA
WVSGFSGGGSDLTGAREAQERGRWSPTESSSASVSPVAKVSKFTLSSELEGGDYPKERER
TGGGPGRPPDWTPHGTGAPAEPTPTHSPCTPPDTLPRPPQGRRAAQSWSPRLESPRAPTN
PEPSATPPLDRSSSVGCLAEASARFPARTRNLSGEPRTRQDSPKPSGSGEPRAHPHQPED
RVPPNA
Sequence length 2406
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
82
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Clear cell carcinoma of kidney Benign rs61732495 RCV005933357
HIVEP3-related disorder Uncertain significance; Likely benign; Benign rs1291998192, rs2521990706, rs34970884, rs141636566, rs369641811, rs146324975, rs78793608, rs35784470, rs2521943305, rs559361161, rs35624100, rs1241831148, rs150644975, rs755009116, rs200163948
View all (64 more)
RCV003403098
RCV003397840
RCV003919070
RCV003946505
RCV003919071
RCV003907090
RCV003907131
RCV003909510
RCV003919637
RCV003929734
RCV003929745
RCV003893983
RCV003904139
RCV003964533
RCV003903993
RCV003911989
RCV003912054
RCV003912243
RCV003914257
RCV003979380
RCV003977324
RCV003911598
RCV003909714
RCV003914115
RCV003952116
RCV003944590
RCV003972081
RCV003972107
RCV003917101
RCV003931504
RCV003931545
RCV003931596
RCV003927236
RCV003939595
RCV003939615
RCV003951689
RCV003951733
RCV003951793
RCV003914438
RCV003917394
RCV003939369
RCV003941354
RCV003937184
RCV003951448
RCV003922045
RCV003922265
RCV003932165
RCV003932189
RCV003942154
RCV003949194
RCV003944647
RCV003979096
RCV003979113
RCV003964336
RCV003964750
RCV003982051
RCV003982092
RCV003971792
RCV003971830
RCV003962081
RCV003971503
RCV003976544
RCV003976615
RCV003969120
RCV003976349
RCV003976432
RCV003972709
RCV003972711
RCV003970262
RCV003972710
RCV003983068
RCV003983069
RCV003970263
RCV003972712
RCV003915880
RCV003978288
RCV003918459
RCV003918450
RCV003918451
Neurodevelopmental disorder Uncertain significance rs1644389600 RCV001262215
See cases Uncertain significance rs2149047392 RCV001837266
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Carcinogenesis Associate 21524353
Diabetes Mellitus Type 2 Associate 23300827
Leukemia Myeloid Acute Associate 35535739
Neoplasms Inhibit 21524353
Osteoporosis Associate 29518962
Parkinson Disease Associate 24156912