Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
5900
Gene name Gene Name - the full gene name approved by the HGNC.
Ral guanine nucleotide dissociation stimulator
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
RALGDS
Synonyms (NCBI Gene) Gene synonyms aliases
RGDS, RGF, RalGEF
Chromosome Chromosome number
9
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
9q34.13-q34.2
Summary Summary of gene provided in NCBI Entrez Gene.
Guanine nucleotide dissociation stimulators (GDSs, or exchange factors), such as RALGDS, are effectors of Ras-related GTPases (see MIM 190020) that participate in signaling for a variety of cellular processes.[supplied by OMIM, Nov 2010]
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT017310 hsa-miR-335-5p Microarray 18185580
MIRT047157 hsa-miR-183-5p CLASH 23622248
MIRT044953 hsa-miR-186-5p CLASH 23622248
MIRT039756 hsa-miR-615-3p CLASH 23622248
MIRT439826 hsa-miR-374a-5p HITS-CLIP 22473208
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005085 Function Guanyl-nucleotide exchange factor activity IEA
GO:0005515 Function Protein binding IPI 20936779, 21988832, 22705156, 24441586, 25241761
GO:0005634 Component Nucleus IDA 22797597
GO:0005829 Component Cytosol IDA 22797597
GO:0005829 Component Cytosol TAS
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
601619 9842 ENSG00000160271
Protein
UniProt ID Q12967
Protein name Ral guanine nucleotide dissociation stimulator (RalGDS) (Ral guanine nucleotide exchange factor) (RalGEF)
Protein function Functions as a guanine nucleotide exchange factor (GEF) activating either RalA or RalB GTPases and plays an important role in intracellular transport. Interacts and acts as an effector molecule for R-Ras, H-Ras, K-Ras, and Rap (By similarity). D
PDB 1RAX , 2B3A , 2RGF , 3KH0
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00618 RasGEF_N 115 227 RasGEF N-terminal motif Domain
PF00617 RasGEF 389 596 RasGEF domain Family
PF00788 RA 798 885 Ras association (RalGDS/AF-6) domain Domain
Sequence
MVQRMWAEAAGPAGGAEPLFPGSRRSRSVWDAVRLEVGVPDSCPVVLHSFTQLDPDLPRP
ESSTQEIGEELINGVIYSISLRKVQLHHGGNKGQRWLGYENESALNLYETCKVRTVKAGT
LEKLVEHLVPAFQGSDLSYVTIFLCTYRAFTTTQQVLDLLFKRYGRCDALTASSRYGCIL
PYSDEDGGPQDQLKNAISSILGTWLDQYSEDFCQPPDFPCLKQLVAY
VQLNMPGSDLERR
AHLLLAQLEHSEPIEAEPEALSPVPALKPTPELELALTPARAPSPVPAPAPEPEPAPTPA
PGSELEVAPAPAPELQQAPEPAVGLESAPAPALELEPAPEQDPAPSQTLELEPAPAPVPS
LQPSWPSPVVAENGLSEEKPHLLVFPPDLVAEQFTLMDAELFKKVVPYHCLGSIWSQRDK
KGKEHLAPTIRATVTQFNSVANCVITTCLGNRSTKAPDRARVVEHWIEVARECRILKNFS
SLYAILSALQSNSIHRLKKTWEDVSRDSFRIFQKLSEIFSDENNYSLSRELLIKEGTSKF
ATLEMNPKRAQKRPKETGIIQGTVPYLGTFLTDLVMLDTAMKDYLYGRLINFEKRR
KEFE
VIAQIKLLQSACNNYSIAPDEQFGAWFRAVERLSETESYNLSCELEPPSESASNTLRTKK
NTAIVKRWSDRQAPSTELSTSGSSHSKSCDQLRCGPYLSSGDIADALSVHSAGSSSSDVE
EINISFVPESPDGQEKKFWESASQSSPETSGISSASSSTSSSSASTTPVAATRTHKRSVS
GLCNSSSALPLYNQQVGDCCIIRVSLDVDNGNMYKSILVTSQDKAPAVIRKAMDKHNLEE
EEPEDYELLQILSDDRKLKIPENANVFYAMNSTANYDFVLKKRTF
TKGVKVKHGASSTLP
RMKQKGLKIAKGIF
Sequence length 914
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Ras signaling pathway
Rap1 signaling pathway
Phospholipase D signaling pathway
Pathways in cancer
Colorectal cancer
Pancreatic cancer
Choline metabolism in cancer
  p38MAPK events
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Colorectal cancer Colorectal Carcinoma rs137854568, rs137854573, rs137854575, rs387906234, rs121908380, rs121908702, rs267606674, rs794729661, rs121909055, rs281865417, rs267606884, rs28934575, rs587776769, rs104893815, rs587776800
View all (467 more)
Mental retardation Profound Mental Retardation, Mental deficiency, Intellectual Disability rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
21937992
Unknown
Disease term Disease name Evidence References Source
Neurodevelopmental Disorders complex neurodevelopmental disorder, neurodevelopmental disorder GenCC
Associations from Text Mining
Disease Name Relationship Type References
Carcinoma Pancreatic Ductal Associate 24222664
Colorectal Neoplasms Associate 21199803, 26222778
Diabetes Mellitus Associate 32075680
Fibrosarcoma Associate 32499600
Melanoma Associate 20412563
Neoplasms Associate 25578962, 34715892, 40157967
Noonan Syndrome Associate 25941399
Persistent Infection Associate 32075680