Gene Gene information from NCBI Gene database.
Entrez ID 5889
Gene name RAD51 paralog C
Gene symbol RAD51C
Synonyms (NCBI Gene)
BROVCA3FANCOR51H3RAD51L2
Chromosome 17
Chromosome location 17q22
Summary This gene is a member of the RAD51 family. RAD51 family members are highly similar to bacterial RecA and Saccharomyces cerevisiae Rad51 and are known to be involved in the homologous recombination and repair of DNA. This protein can interact with other RA
SNPs SNP information provided by dbSNP.
83
SNP ID Visualize variation Clinical significance Consequence
rs140804406 C>T Conflicting-interpretations-of-pathogenicity, uncertain-significance Genic downstream transcript variant, missense variant, non coding transcript variant, coding sequence variant
rs145310733 A>G Likely-pathogenic Splice acceptor variant, genic downstream transcript variant
rs147241704 G>A Uncertain-significance, conflicting-interpretations-of-pathogenicity, likely-benign Missense variant, non coding transcript variant, genic downstream transcript variant, coding sequence variant
rs149228565 A>T Uncertain-significance, conflicting-interpretations-of-pathogenicity, likely-benign 5 prime UTR variant, synonymous variant, non coding transcript variant, coding sequence variant
rs200293302 C>T Pathogenic Non coding transcript variant, genic downstream transcript variant, stop gained, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
25
miRTarBase ID miRNA Experiments Reference
MIRT000898 hsa-miR-15a-5p Microarray 18362358
MIRT000897 hsa-miR-16-5p Microarray 18362358
MIRT029315 hsa-miR-26b-5p Microarray 19088304
MIRT048689 hsa-miR-99a-5p CLASH 23622248
MIRT048598 hsa-miR-100-5p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
47
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0000400 Function Four-way junction DNA binding IBA
GO:0000400 Function Four-way junction DNA binding IDA 20207730
GO:0000707 Process Meiotic DNA recombinase assembly IBA
GO:0000722 Process Telomere maintenance via recombination IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
602774 9820 ENSG00000108384
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O43502
Protein name DNA repair protein RAD51 homolog 3 (R51H3) (RAD51 homolog C) (RAD51-like protein 2)
Protein function Essential for the homologous recombination (HR) pathway of DNA repair. Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents. Part of the RAD5
PDB 8FAZ , 8GBJ , 8OUY , 8OUZ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF08423 Rad51 31 349 Rad51 Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in a variety of tissues, with highest expression in testis, heart muscle, spleen and prostate.
Sequence
Sequence length 376
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Homologous recombination
Fanconi anemia pathway
  HDR through Homologous Recombination (HRR)
Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)
Resolution of D-loop Structures through Holliday Junction Intermediates
Homologous DNA Pairing and Strand Exchange
Presynaptic phase of homologous DNA pairing and strand exchange
Factors involved in megakaryocyte development and platelet production
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
4608
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Breast and/or ovarian cancer Likely pathogenic; Pathogenic rs1413872299, rs587781410, rs587781490, rs587781995, rs587782702, rs786201909, rs387907159, rs2047958236, rs2048273755 RCV003492253
RCV001271004
RCV001271006
RCV001271008
RCV001798459
RCV001798584
RCV003149575
RCV001271005
RCV001271007
Breast carcinoma Pathogenic; Likely pathogenic rs2143961266, rs200293302, rs770637624 RCV001579300
RCV001554248
RCV001554261
Breast-ovarian cancer, familial, susceptibility to, 1 Pathogenic rs730881939, rs2047814459 RCV004804701
RCV001090199
Breast-ovarian cancer, familial, susceptibility to, 3 Pathogenic; Likely pathogenic rs1233795152, rs2143746162, rs2143797889, rs2143853617, rs2143963184, rs2143670048, rs1555593939, rs2143748292, rs1413872299, rs2143798753, rs201529791, rs2143800709, rs1567794476, rs876658644, rs1555599090
View all (149 more)
RCV004037676
RCV001779161
RCV003463007
RCV004037683
RCV004037654
RCV001779190
RCV001779193
RCV001779198
RCV001779199
RCV001779202
RCV001779203
RCV001779204
RCV001779205
RCV001779206
RCV001779207
RCV001779209
RCV001779173
RCV001779211
RCV001779216
RCV001780383
RCV001786499
RCV001786505
RCV000456115
RCV000456123
RCV003464307
RCV004019712
RCV003453830
RCV004039889
RCV004044356
RCV003336474
RCV003464227
RCV004044360
RCV005025534
RCV000501924
RCV000576579
RCV003467108
RCV001095710
RCV000576619
RCV002505113
RCV000410098
RCV000007225
RCV000763015
RCV002290334
RCV004049900
RCV004053726
RCV003464470
RCV000024266
RCV000409268
RCV002492641
RCV000763014
RCV003462105
RCV003467270
RCV004055352
RCV004063353
RCV005248771
RCV003468811
RCV004019977
RCV003467296
RCV003462204
RCV000576766
RCV003464564
RCV003465851
RCV003468897
RCV004068519
RCV003455657
RCV000007226
RCV000007227
RCV003469087
RCV002467443
RCV001778807
RCV002503867
RCV000024267
RCV004020658
RCV000662608
RCV005425836
RCV003140308
RCV004020887
RCV000409098
RCV004020936
RCV004020924
RCV004330305
RCV003315484
RCV003316934
RCV003450514
RCV003463442
RCV003471780
RCV003463443
RCV003463444
RCV003471781
RCV003450528
RCV003450529
RCV003452615
RCV004368981
RCV004369018
RCV005422334
RCV005425200
RCV004437811
RCV004439929
RCV004440027
RCV004440046
RCV004440047
RCV004440124
RCV004440206
RCV004440215
RCV004440220
RCV004440233
RCV004440241
RCV004440256
RCV004440259
RCV004440274
RCV004440306
RCV004440313
RCV004440332
RCV004440348
RCV004442445
RCV004442481
RCV004442486
RCV004442502
RCV004442516
RCV004442528
RCV004442534
RCV004442573
RCV004442593
RCV004442659
RCV000411364
RCV004022156
RCV003463922
RCV003449139
RCV000024264
RCV000024265
RCV000576324
RCV004568045
RCV003493581
RCV003334388
RCV000576452
RCV004023612
RCV003470763
RCV003459395
RCV003459371
RCV003459268
RCV003459370
RCV004024465
RCV004024458
RCV003153738
RCV003459306
RCV003465249
RCV003465212
RCV000755025
RCV004024504
RCV004024457
RCV004569284
RCV003470841
RCV003459303
RCV004024464
RCV003459305
RCV003451314
RCV003465411
RCV003465427
RCV004026257
RCV004026720
RCV004025057
RCV004027258
RCV004027301
RCV002501009
RCV004027345
RCV003155961
RCV003461114
RCV004030308
RCV003461344
RCV004030368
RCV005866738
RCV004030841
RCV005427496
RCV004030972
RCV003455176
RCV002290581
RCV004031647
RCV004033018
RCV004033379
RCV004033405
RCV004033484
RCV004033846
RCV004033176
RCV004783945
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Breast and Ovarian Cancer Susceptibility Benign; Likely benign rs28363317, rs45511291, rs28363336, rs12946397 RCV000341847
RCV000402152
RCV000366342
RCV000269140
Breast-ovarian cancer, familial, susceptibility to, 2 Conflicting classifications of pathogenicity rs587781309, rs751528808 RCV005604781
RCV005623342
Childhood neoplasm Conflicting classifications of pathogenicity rs547142453 RCV005621922
Familial cancer of breast Conflicting classifications of pathogenicity; Benign; Likely benign; Uncertain significance rs147241704, rs2143798127, rs781166242, rs755092293 RCV002272129
RCV003340672
RCV000477694
RCV001195012
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Adenomatous Polyposis Coli Associate 39519399
Alzheimer Disease Associate 34367470
Ataxia Associate 27296891
Breast Neoplasms Associate 22370629, 22383991, 22476429, 22843497, 23021409, 24139550, 24359560, 25452441, 26534844, 26824983, 26873923, 28419251, 28796317, 28825726, 28864920
View all (30 more)
Breast Neoplasms Stimulate 32091585
Carcinogenesis Associate 27465554
Carcinoma Hepatocellular Associate 38297111
Carcinoma Non Small Cell Lung Associate 27465554, 37074454
Carcinoma Ovarian Epithelial Associate 24504028, 26261251, 29020732, 30640700, 36162851, 36210504
Colorectal Neoplasms Associate 25669972, 27296891, 35567913, 35881546