Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
5805
Gene name Gene Name - the full gene name approved by the HGNC.
6-pyruvoyltetrahydropterin synthase
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
PTS
Synonyms (NCBI Gene) Gene synonyms aliases
PTPS
Chromosome Chromosome number
11
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
11q23.1
Summary Summary of gene provided in NCBI Entrez Gene.
The enzyme encoded by this gene catalyzes the elimination of inorganic triphosphate from dihydroneopterin triphosphate, which is the second and irreversible step in the biosynthesis of tetrahydrobiopterin from GTP. Tetrahydrobiopterin, also known as BH(4)
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs104894273 G>A Pathogenic Missense variant, coding sequence variant
rs104894274 C>T Pathogenic, uncertain-significance Missense variant, coding sequence variant
rs104894275 A>G Pathogenic Missense variant, coding sequence variant
rs104894276 C>G,T Pathogenic Missense variant, coding sequence variant
rs104894277 G>A,C Pathogenic-likely-pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT024591 hsa-miR-215-5p Microarray 19074876
MIRT026112 hsa-miR-192-5p Microarray 19074876
MIRT049542 hsa-miR-92a-3p CLASH 23622248
MIRT1276703 hsa-miR-3616-5p CLIP-seq
MIRT1276704 hsa-miR-3646 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0003874 Function 6-pyruvoyltetrahydropterin synthase activity IEA
GO:0005515 Function Protein binding IPI 19060904, 25416956, 31515488, 32296183
GO:0005737 Component Cytoplasm IDA
GO:0005739 Component Mitochondrion IBA 21873635
GO:0005739 Component Mitochondrion IDA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
612719 9689 ENSG00000150787
Protein
UniProt ID Q03393
Protein name 6-pyruvoyl tetrahydrobiopterin synthase (PTP synthase) (PTPS) (EC 4.2.3.12)
Protein function Involved in the biosynthesis of tetrahydrobiopterin, an essential cofactor of aromatic amino acid hydroxylases. Catalyzes the transformation of 7,8-dihydroneopterin triphosphate into 6-pyruvoyl tetrahydropterin.
PDB 3I2B
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01242 PTPS 13 145 6-pyruvoyl tetrahydropterin synthase Domain
Sequence
Sequence length 145
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Folate biosynthesis
Metabolic pathways
Biosynthesis of cofactors
  Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
6-pyruvoyl-tetrahydropterin synthase deficiency 6-pyruvoyl-tetrahydropterin synthase deficiency rs104894273, rs104894274, rs104894275, rs104894276, rs104894277, rs104894280, rs1555198165, rs62642937, rs74486803, rs77958223, rs62514909, rs199475647, rs199475679, rs62514931, rs62514957
View all (30 more)
3297709, 11388593, 20059486, 22237589, 9222757, 7698774, 9450907, 21933604, 19234759, 10874306, 9159737, 23942198, 19280650, 8707300, 27830117
View all (25 more)
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Hyperphenylalaninemia Hyperphenylalaninaemia rs104894274, rs794726656, rs104894278, rs62514958, rs5030856, rs62517167, rs1035794099, rs775029664, rs1589052989, rs770562664, rs1273776043, rs569240271, rs761235755, rs1277990552, rs370032864
View all (3 more)
Mental retardation Intellectual Disability rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
27604308
Unknown
Disease term Disease name Evidence References Source
Mental depression Depressive disorder ClinVar
Ptosis Blepharoptosis, Ptosis ClinVar
Associations from Text Mining
Disease Name Relationship Type References
6 pyruvoyl tetrahydropterin synthase deficiency Associate 19674121, 8178819, 8841415
6 pyruvoyl tetrahydropterin synthase deficiency Inhibit 8178819
Autistic Disorder Associate 19674121
Dystonia Associate 36054588
Genetic Diseases Inborn Associate 25758715
Immunologic Deficiency Syndromes Associate 35833796
Lupus Erythematosus Systemic Associate 31616406
Metabolic Diseases Associate 27798097
Neoplasms Associate 20413845, 36341348
Parkinson Disease Inhibit 17270157