|
Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
|
5793
|
|
Gene name
Gene Name - the full gene name approved by the HGNC.
|
Protein tyrosine phosphatase receptor type G |
|
Gene symbol
Gene Symbol - the official gene symbol approved by the HGNC.
|
PTPRG |
|
Synonyms (NCBI Gene)
Gene synonyms aliases
|
HPTPG, PTPG, R-PTP-GAMMA, RPTPG |
|
Chromosome
Chromosome number
|
3 |
|
Chromosome location
Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
|
3p14.2 |
|
Summary
Summary of gene provided in NCBI Entrez Gene.
|
The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic tran |
| UniProt ID |
P23470
|
| Protein name |
Receptor-type tyrosine-protein phosphatase gamma (Protein-tyrosine phosphatase gamma) (R-PTP-gamma) (EC 3.1.3.48) |
| Protein function |
Possesses tyrosine phosphatase activity. |
| PDB |
2H4V
,
2HY3
,
2NLK
,
2PBN
,
3JXH
,
3QCB
,
3QCC
,
3QCD
,
3QCE
,
3QCF
,
3QCG
,
3QCH
,
3QCI
,
3QCJ
,
3QCK
,
3QCL
,
3QCM
,
3QCN
,
5E5R
,
8XQD
|
| Family and domains |
Pfam
| Accession |
ID |
Position in sequence |
Description |
Type |
|
PF00194
|
Carb_anhydrase |
59 → 320 |
Eukaryotic-type carbonic anhydrase |
Domain |
|
PF00041
|
fn3 |
348 → 436 |
Fibronectin type III domain |
Domain |
|
PF00102
|
Y_phosphatase |
874 → 1118 |
Protein-tyrosine phosphatase |
Domain |
|
PF00102
|
Y_phosphatase |
1175 → 1409 |
Protein-tyrosine phosphatase |
Domain |
|
| Tissue specificity |
TISSUE SPECIFICITY: Found in a variety of tissues. |
| Sequence |
|
| Sequence length |
1445 |
| Interactions |
View interactions
|
|
Unknown
Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
|
| Disease merge term |
Disease name |
Evidence |
References |
Source |
| Dementia |
Dementia |
N/A |
N/A |
GWAS |
| Dermatitis |
Atopic dermatitis |
N/A |
N/A |
GWAS |
| Ischemic Stroke |
Ischemic stroke |
N/A |
N/A |
GWAS |
| Mental Depression |
Major depressive disorder |
N/A |
N/A |
GWAS |
| Metabolic Syndrome |
Metabolic syndrome |
N/A |
N/A |
GWAS |
| Neuroticism |
Neuroticism |
N/A |
N/A |
GWAS |
| Ovarian cancer |
Epithelial ovarian cancer |
N/A |
N/A |
GWAS |
| Psoriasis |
Psoriasis |
N/A |
N/A |
GWAS |
| Schizophrenia |
Schizophrenia |
N/A |
N/A |
GWAS |
|
|
Associations from Text Mining
Disease associations identified through Pubtator
|
| Disease Name |
Relationship Type |
References |
| Adenoma |
Associate
|
21150880 |
| Breast Neoplasms |
Associate
|
16475675, 26409453 |
| Breast Neoplasms |
Inhibit
|
27602768 |
| Carcinogenesis |
Associate
|
16475675, 24496747, 27602768 |
| Carcinoma Renal Cell |
Associate
|
36405010 |
| Colorectal Neoplasms |
Associate
|
21150880 |
| COVID 19 |
Associate
|
36460583 |
| Diabetes Gestational |
Associate
|
34530062 |
| Fuchs' Endothelial Dystrophy |
Associate
|
20825314, 22234156 |
| Hereditary Breast and Ovarian Cancer Syndrome |
Associate
|
27602768 |
| Kidney Neoplasms |
Associate
|
16475675 |
| Leukemia Myelogenous Chronic BCR ABL Positive |
Inhibit
|
32225105, 32700424, 33893334, 36382578 |
| Leukemia Myelogenous Chronic BCR ABL Positive |
Associate
|
34906644, 36077295 |
| Memory Disorders |
Associate
|
27211562 |
| Multiple Myeloma |
Associate
|
37019174 |
| Multiple Sclerosis |
Associate
|
33603109 |
| Neoplasms |
Inhibit
|
16475675, 27602768, 30145116, 32225105, 33893334, 34906644, 36077295, 36382578, 36405010 |
| Neoplasms |
Associate
|
21150880, 26409453 |
| Osteosarcoma |
Associate
|
29371290 |
| Precursor Cell Lymphoblastic Leukemia Lymphoma |
Associate
|
24496747 |
| Psychotic Disorders |
Associate
|
19567891, 27211562 |
| Stomach Neoplasms |
Associate
|
17963294 |
| Triple Negative Breast Neoplasms |
Associate
|
34326372 |
|