Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	57687
Gene name Gene Name - the full gene name approved by the HGNC.	Vesicle amine transport 1 like
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	VAT1L
Synonyms (NCBI Gene) Gene synonyms aliases	-
Chromosome Chromosome number	16
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	16q23.1

Show/Hide all(76)

miRTarBase ID	miRNA	Experiments	Reference
MIRT018808	hsa-miR-335-5p	Microarray	18185580
MIRT443597	hsa-miR-6792-5p	PAR-CLIP	22100165
MIRT443596	hsa-miR-4662a-5p	PAR-CLIP	22100165
MIRT443595	hsa-miR-4503	PAR-CLIP	22100165
MIRT439311	hsa-miR-1185-2-3p	HITS-CLIP	24374217
MIRT439312	hsa-miR-1185-1-3p	HITS-CLIP	24374217
MIRT439311	hsa-miR-1185-2-3p	HITS-CLIP	24374217
MIRT439312	hsa-miR-1185-1-3p	HITS-CLIP	24374217
MIRT443597	hsa-miR-6792-5p	PAR-CLIP	22100165
MIRT443596	hsa-miR-4662a-5p	PAR-CLIP	22100165
MIRT443595	hsa-miR-4503	PAR-CLIP	22100165
MIRT1482965	hsa-miR-1256	CLIP-seq
MIRT1482966	hsa-miR-1322	CLIP-seq
MIRT1482967	hsa-miR-138	CLIP-seq
MIRT1482968	hsa-miR-2861	CLIP-seq
MIRT1482969	hsa-miR-3150b-3p	CLIP-seq
MIRT1482970	hsa-miR-3169	CLIP-seq
MIRT1482971	hsa-miR-3199	CLIP-seq
MIRT1482972	hsa-miR-3909	CLIP-seq
MIRT1482973	hsa-miR-3942-3p	CLIP-seq
MIRT1482974	hsa-miR-4263	CLIP-seq
MIRT1482975	hsa-miR-4265	CLIP-seq
MIRT1482976	hsa-miR-4277	CLIP-seq
MIRT1482977	hsa-miR-4296	CLIP-seq
MIRT1482978	hsa-miR-4322	CLIP-seq
MIRT1482979	hsa-miR-4417	CLIP-seq
MIRT1482980	hsa-miR-4423-3p	CLIP-seq
MIRT1482981	hsa-miR-4437	CLIP-seq
MIRT1482982	hsa-miR-4674	CLIP-seq
MIRT1482983	hsa-miR-4784	CLIP-seq
MIRT1482984	hsa-miR-4799-5p	CLIP-seq
MIRT1482985	hsa-miR-513a-3p	CLIP-seq
MIRT1482986	hsa-miR-576-5p	CLIP-seq
MIRT1482987	hsa-miR-616	CLIP-seq
MIRT1482988	hsa-miR-643	CLIP-seq
MIRT1482989	hsa-miR-661	CLIP-seq
MIRT2145402	hsa-miR-1255a	CLIP-seq
MIRT2145403	hsa-miR-1255b	CLIP-seq
MIRT2145404	hsa-miR-3613-3p	CLIP-seq
MIRT2145405	hsa-miR-3614-5p	CLIP-seq
MIRT1482976	hsa-miR-4277	CLIP-seq
MIRT2145406	hsa-miR-4645-3p	CLIP-seq
MIRT2145407	hsa-miR-890	CLIP-seq
MIRT2365615	hsa-miR-18a	CLIP-seq
MIRT2365616	hsa-miR-18b	CLIP-seq
MIRT2365617	hsa-miR-205	CLIP-seq
MIRT2365618	hsa-miR-3622b-5p	CLIP-seq
MIRT2365619	hsa-miR-3662	CLIP-seq
MIRT2365620	hsa-miR-375	CLIP-seq
MIRT2365621	hsa-miR-3926	CLIP-seq
MIRT1482976	hsa-miR-4277	CLIP-seq
MIRT2365622	hsa-miR-4420	CLIP-seq
MIRT2365623	hsa-miR-4720-3p	CLIP-seq
MIRT2365624	hsa-miR-4735-3p	CLIP-seq
MIRT2365625	hsa-miR-4753-3p	CLIP-seq
MIRT2365626	hsa-miR-4804-3p	CLIP-seq
MIRT2365627	hsa-miR-486-3p	CLIP-seq
MIRT2365628	hsa-miR-544	CLIP-seq
MIRT2365629	hsa-miR-548s	CLIP-seq
MIRT2396804	hsa-miR-4427	CLIP-seq
MIRT2694939	hsa-miR-1243	CLIP-seq
MIRT2694940	hsa-miR-1275	CLIP-seq
MIRT2694941	hsa-miR-1293	CLIP-seq
MIRT2694942	hsa-miR-3175	CLIP-seq
MIRT2694943	hsa-miR-3654	CLIP-seq
MIRT2694944	hsa-miR-4447	CLIP-seq
MIRT2694945	hsa-miR-4472	CLIP-seq
MIRT2694946	hsa-miR-4483	CLIP-seq
MIRT2694947	hsa-miR-4525	CLIP-seq
MIRT2694948	hsa-miR-4651	CLIP-seq
MIRT2694949	hsa-miR-4665-5p	CLIP-seq
MIRT2694950	hsa-miR-4723-5p	CLIP-seq
MIRT2694951	hsa-miR-541	CLIP-seq
MIRT2694952	hsa-miR-608	CLIP-seq
MIRT2694953	hsa-miR-625	CLIP-seq
MIRT2694954	hsa-miR-654-5p	CLIP-seq

Show/Hide all(3)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	25416956, 32814053
GO:0008270	Function	Zinc ion binding	IEA
GO:0016491	Function	Oxidoreductase activity	IEA

MIM	HGNC	e!Ensembl
620202	29315	ENSG00000171724

Protein

UniProt ID

Q9HCJ6

Protein name

Synaptic vesicle membrane protein VAT-1 homolog-like (EC 1.-.-.-)

PDB

4A27

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF08240	ADH_N	68 → 144	Alcohol dehydrogenase GroES-like domain	Domain
PF13602	ADH_zinc_N_2	218 → 378		Domain

Tissue specificity

TISSUE SPECIFICITY: Detected in skin fibroblasts. {ECO:0000269|PubMed:19844255}.

Sequence

MAKEGVEKAEETEQMIEKEAGKEPAEGGGGDGSHRLGDAQEMRAVVLAGFGGLNKLRLFR
KAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGY
EIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLRE
GMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQEVK
RISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEK
VNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEV
KEAMQRIHDRGNIGKLILDVEKTPTPLMANDSTETSEAGEEEEDHEGDSENKERMPFIQ

Sequence length

419

Interactions

View interactions

Show/Hide Causal Diseases (2)

Disease term	Disease name	dbSNP ID	References
Causal
Alzheimer disease	Alzheimer`s Disease	rs63750215, rs28936379, rs63749851, rs63749884, rs28936380, rs63750048, rs63750579, rs63750264, rs63749964, rs63750671, rs281865161, rs63750066, rs63750399, rs63750734, rs63751039 View all (65 more)	23535033
Narcolepsy	Narcolepsy	rs104894574, rs387906655	19629137

Show/Hide Unknown Diseases (3)

Disease term	Disease name	Source
Unknown
Takayasu Arteritis	Takayasu Arteritis	GWAS
Hypertension	Hypertension	GWAS
Insomnia	Insomnia	GWAS

Show/Hide Text Mining Associations (5)

Disease Name	Relationship Type	References
Associations from Text Mining
Alzheimer Disease	Associate	36776048
Breast Neoplasms	Associate	37564657
Diabetes Mellitus	Associate	33562295
Metabolic Syndrome	Stimulate	40243895
Osteoarthritis	Stimulate	40243895

VAT1L (vesicle amine transport 1 like)