Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	57683
Gene name Gene Name - the full gene name approved by the HGNC.	Zinc finger DBF-type containing 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	ZDBF2
Synonyms (NCBI Gene) Gene synonyms aliases	Slx9
Chromosome Chromosome number	2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	2q33.3
Summary Summary of gene provided in NCBI Entrez Gene.	This gene encodes a protein containing DBF4-type zinc finger domains. This gene is imprinted and paternally expressed in lymphocytes but is more stochastically expressed in the placenta. Alternative splicing results in multiple transcript variants. [provi

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miRTarBase ID	miRNA	Experiments	Reference
MIRT681054	hsa-miR-148a-5p	HITS-CLIP	23706177
MIRT681053	hsa-miR-1247-3p	HITS-CLIP	23706177
MIRT681052	hsa-miR-610	HITS-CLIP	23706177
MIRT681051	hsa-miR-6134	HITS-CLIP	23706177
MIRT681050	hsa-miR-377-5p	HITS-CLIP	23706177
MIRT681049	hsa-miR-6086	HITS-CLIP	23706177
MIRT681048	hsa-miR-4746-3p	HITS-CLIP	23706177
MIRT681047	hsa-miR-3689d	HITS-CLIP	23706177
MIRT681046	hsa-miR-6851-5p	HITS-CLIP	23706177
MIRT681045	hsa-miR-6799-5p	HITS-CLIP	23706177
MIRT681044	hsa-miR-4792	HITS-CLIP	23706177
MIRT681043	hsa-miR-6880-5p	HITS-CLIP	23706177
MIRT681042	hsa-miR-7847-3p	HITS-CLIP	23706177
MIRT439240	hsa-miR-493-5p	HITS-CLIP	24374217
MIRT439240	hsa-miR-493-5p	HITS-CLIP	24374217
MIRT681054	hsa-miR-148a-5p	HITS-CLIP	23706177
MIRT681053	hsa-miR-1247-3p	HITS-CLIP	23706177
MIRT681052	hsa-miR-610	HITS-CLIP	23706177
MIRT681051	hsa-miR-6134	HITS-CLIP	23706177
MIRT681050	hsa-miR-377-5p	HITS-CLIP	23706177
MIRT681049	hsa-miR-6086	HITS-CLIP	23706177
MIRT681048	hsa-miR-4746-3p	HITS-CLIP	23706177
MIRT681047	hsa-miR-3689d	HITS-CLIP	23706177
MIRT681046	hsa-miR-6851-5p	HITS-CLIP	23706177
MIRT681045	hsa-miR-6799-5p	HITS-CLIP	23706177
MIRT681044	hsa-miR-4792	HITS-CLIP	23706177
MIRT681043	hsa-miR-6880-5p	HITS-CLIP	23706177
MIRT681042	hsa-miR-7847-3p	HITS-CLIP	23706177
MIRT1507596	hsa-miR-1183	CLIP-seq
MIRT1507597	hsa-miR-1245	CLIP-seq
MIRT1507598	hsa-miR-1252	CLIP-seq
MIRT1507599	hsa-miR-1285	CLIP-seq
MIRT1507600	hsa-miR-129-5p	CLIP-seq
MIRT1507601	hsa-miR-155	CLIP-seq
MIRT1507602	hsa-miR-186	CLIP-seq
MIRT1507603	hsa-miR-203	CLIP-seq
MIRT1507604	hsa-miR-2114	CLIP-seq
MIRT1507605	hsa-miR-2276	CLIP-seq
MIRT1507606	hsa-miR-23a	CLIP-seq
MIRT1507607	hsa-miR-23b	CLIP-seq
MIRT1507608	hsa-miR-23c	CLIP-seq
MIRT1507609	hsa-miR-24	CLIP-seq
MIRT1507610	hsa-miR-2861	CLIP-seq
MIRT1507611	hsa-miR-297	CLIP-seq
MIRT1507612	hsa-miR-3120-5p	CLIP-seq
MIRT1507613	hsa-miR-3129-3p	CLIP-seq
MIRT1507614	hsa-miR-3150b-3p	CLIP-seq
MIRT1507615	hsa-miR-3163	CLIP-seq
MIRT1507616	hsa-miR-3187-5p	CLIP-seq
MIRT1507617	hsa-miR-3188	CLIP-seq
MIRT1507618	hsa-miR-323-3p	CLIP-seq
MIRT1507619	hsa-miR-3612	CLIP-seq
MIRT1507620	hsa-miR-3613-3p	CLIP-seq
MIRT1507621	hsa-miR-3622b-5p	CLIP-seq
MIRT1507622	hsa-miR-3646	CLIP-seq
MIRT1507623	hsa-miR-3647-3p	CLIP-seq
MIRT1507624	hsa-miR-3653	CLIP-seq
MIRT1507625	hsa-miR-3658	CLIP-seq
MIRT1507626	hsa-miR-3664-5p	CLIP-seq
MIRT1507627	hsa-miR-3672	CLIP-seq
MIRT1507628	hsa-miR-3688-3p	CLIP-seq
MIRT1507629	hsa-miR-3692	CLIP-seq
MIRT1507630	hsa-miR-371-5p	CLIP-seq
MIRT1507631	hsa-miR-371b-5p	CLIP-seq
MIRT1507632	hsa-miR-3929	CLIP-seq
MIRT1507633	hsa-miR-3945	CLIP-seq
MIRT1507634	hsa-miR-409-3p	CLIP-seq
MIRT1507635	hsa-miR-410	CLIP-seq
MIRT1507636	hsa-miR-412	CLIP-seq
MIRT1507637	hsa-miR-4253	CLIP-seq
MIRT1507638	hsa-miR-4284	CLIP-seq
MIRT1507639	hsa-miR-4419b	CLIP-seq
MIRT1507640	hsa-miR-4436b-5p	CLIP-seq
MIRT1507641	hsa-miR-4474-5p	CLIP-seq
MIRT1507642	hsa-miR-4477a	CLIP-seq
MIRT1507643	hsa-miR-4478	CLIP-seq
MIRT1507644	hsa-miR-4505	CLIP-seq
MIRT1507645	hsa-miR-4520a-3p	CLIP-seq
MIRT1507646	hsa-miR-4520b-3p	CLIP-seq
MIRT1507647	hsa-miR-4522	CLIP-seq
MIRT1507648	hsa-miR-4635	CLIP-seq
MIRT1507649	hsa-miR-4666-5p	CLIP-seq
MIRT1507650	hsa-miR-4687-3p	CLIP-seq
MIRT1507651	hsa-miR-4689	CLIP-seq
MIRT1507652	hsa-miR-4695-5p	CLIP-seq
MIRT1507653	hsa-miR-4698	CLIP-seq
MIRT1507654	hsa-miR-4762-3p	CLIP-seq
MIRT1507655	hsa-miR-4766-5p	CLIP-seq
MIRT1507656	hsa-miR-4772-3p	CLIP-seq
MIRT1507657	hsa-miR-4775	CLIP-seq
MIRT1507658	hsa-miR-4778-5p	CLIP-seq
MIRT1507659	hsa-miR-4781-3p	CLIP-seq
MIRT1507660	hsa-miR-4784	CLIP-seq
MIRT1507661	hsa-miR-4802-3p	CLIP-seq
MIRT1507662	hsa-miR-518a-5p	CLIP-seq
MIRT1507663	hsa-miR-526b	CLIP-seq
MIRT1507664	hsa-miR-527	CLIP-seq
MIRT1507665	hsa-miR-544	CLIP-seq
MIRT1507666	hsa-miR-548c-3p	CLIP-seq
MIRT1507667	hsa-miR-548u	CLIP-seq
MIRT1507668	hsa-miR-552	CLIP-seq
MIRT1507669	hsa-miR-567	CLIP-seq
MIRT1507670	hsa-miR-568	CLIP-seq
MIRT1507671	hsa-miR-586	CLIP-seq
MIRT1507672	hsa-miR-590-3p	CLIP-seq
MIRT1507673	hsa-miR-599	CLIP-seq
MIRT1507674	hsa-miR-612	CLIP-seq
MIRT1507675	hsa-miR-618	CLIP-seq
MIRT1507676	hsa-miR-650	CLIP-seq
MIRT1507677	hsa-miR-943	CLIP-seq
MIRT1507606	hsa-miR-23a	CLIP-seq
MIRT1507607	hsa-miR-23b	CLIP-seq
MIRT1507608	hsa-miR-23c	CLIP-seq
MIRT1507609	hsa-miR-24	CLIP-seq
MIRT2152885	hsa-miR-2909	CLIP-seq
MIRT2152886	hsa-miR-3606	CLIP-seq
MIRT1507627	hsa-miR-3672	CLIP-seq
MIRT2152887	hsa-miR-3926	CLIP-seq
MIRT2152888	hsa-miR-4278	CLIP-seq
MIRT1507638	hsa-miR-4284	CLIP-seq
MIRT2152889	hsa-miR-4433	CLIP-seq
MIRT2152890	hsa-miR-4459	CLIP-seq
MIRT2152891	hsa-miR-4668-5p	CLIP-seq
MIRT1507653	hsa-miR-4698	CLIP-seq
MIRT2152892	hsa-miR-4768-3p	CLIP-seq
MIRT2152893	hsa-miR-4786-5p	CLIP-seq
MIRT2152894	hsa-miR-548s	CLIP-seq
MIRT2152895	hsa-miR-769-5p	CLIP-seq
MIRT1507677	hsa-miR-943	CLIP-seq
MIRT1507604	hsa-miR-2114	CLIP-seq
MIRT1507606	hsa-miR-23a	CLIP-seq
MIRT1507607	hsa-miR-23b	CLIP-seq
MIRT1507608	hsa-miR-23c	CLIP-seq
MIRT2373223	hsa-miR-2682	CLIP-seq
MIRT2373224	hsa-miR-2964a-3p	CLIP-seq
MIRT2373225	hsa-miR-302f	CLIP-seq
MIRT1507617	hsa-miR-3188	CLIP-seq
MIRT2373226	hsa-miR-3197	CLIP-seq
MIRT2373227	hsa-miR-3656	CLIP-seq
MIRT1507629	hsa-miR-3692	CLIP-seq
MIRT1507632	hsa-miR-3929	CLIP-seq
MIRT1507636	hsa-miR-412	CLIP-seq
MIRT1507639	hsa-miR-4419b	CLIP-seq
MIRT2373228	hsa-miR-4423-3p	CLIP-seq
MIRT1507640	hsa-miR-4436b-5p	CLIP-seq
MIRT1507641	hsa-miR-4474-5p	CLIP-seq
MIRT1507643	hsa-miR-4478	CLIP-seq
MIRT2373229	hsa-miR-449c	CLIP-seq
MIRT2373230	hsa-miR-4649-3p	CLIP-seq
MIRT1507653	hsa-miR-4698	CLIP-seq
MIRT2373231	hsa-miR-4722-5p	CLIP-seq
MIRT2152892	hsa-miR-4768-3p	CLIP-seq
MIRT2373232	hsa-miR-485-5p	CLIP-seq
MIRT1507662	hsa-miR-518a-5p	CLIP-seq
MIRT1507664	hsa-miR-527	CLIP-seq
MIRT1507668	hsa-miR-552	CLIP-seq
MIRT2373233	hsa-miR-940	CLIP-seq
MIRT2397283	hsa-miR-1273e	CLIP-seq
MIRT2373224	hsa-miR-2964a-3p	CLIP-seq
MIRT2373225	hsa-miR-302f	CLIP-seq
MIRT2463884	hsa-miR-3668	CLIP-seq
MIRT2397283	hsa-miR-1273e	CLIP-seq
MIRT1507604	hsa-miR-2114	CLIP-seq
MIRT2666075	hsa-miR-217	CLIP-seq
MIRT2373223	hsa-miR-2682	CLIP-seq
MIRT2373224	hsa-miR-2964a-3p	CLIP-seq
MIRT2373225	hsa-miR-302f	CLIP-seq
MIRT1507612	hsa-miR-3120-5p	CLIP-seq
MIRT1507613	hsa-miR-3129-3p	CLIP-seq
MIRT2666076	hsa-miR-3143	CLIP-seq
MIRT1507615	hsa-miR-3163	CLIP-seq
MIRT2666077	hsa-miR-3545-3p	CLIP-seq
MIRT1507620	hsa-miR-3613-3p	CLIP-seq
MIRT1507621	hsa-miR-3622b-5p	CLIP-seq
MIRT1507626	hsa-miR-3664-5p	CLIP-seq
MIRT1507627	hsa-miR-3672	CLIP-seq
MIRT1507630	hsa-miR-371-5p	CLIP-seq
MIRT1507631	hsa-miR-371b-5p	CLIP-seq
MIRT1507637	hsa-miR-4253	CLIP-seq
MIRT2666078	hsa-miR-4282	CLIP-seq
MIRT2373228	hsa-miR-4423-3p	CLIP-seq
MIRT2373229	hsa-miR-449c	CLIP-seq
MIRT1507647	hsa-miR-4522	CLIP-seq
MIRT2666079	hsa-miR-4668-3p	CLIP-seq
MIRT2373231	hsa-miR-4722-5p	CLIP-seq
MIRT2152892	hsa-miR-4768-3p	CLIP-seq
MIRT1507666	hsa-miR-548c-3p	CLIP-seq
MIRT1507667	hsa-miR-548u	CLIP-seq
MIRT2666080	hsa-miR-579	CLIP-seq
MIRT1507675	hsa-miR-618	CLIP-seq
MIRT2373233	hsa-miR-940	CLIP-seq
MIRT2397283	hsa-miR-1273e	CLIP-seq
MIRT2373223	hsa-miR-2682	CLIP-seq
MIRT2373224	hsa-miR-2964a-3p	CLIP-seq
MIRT2373225	hsa-miR-302f	CLIP-seq
MIRT1507612	hsa-miR-3120-5p	CLIP-seq
MIRT1507615	hsa-miR-3163	CLIP-seq
MIRT1507620	hsa-miR-3613-3p	CLIP-seq
MIRT1507626	hsa-miR-3664-5p	CLIP-seq
MIRT1507627	hsa-miR-3672	CLIP-seq
MIRT1507630	hsa-miR-371-5p	CLIP-seq
MIRT1507631	hsa-miR-371b-5p	CLIP-seq
MIRT2666078	hsa-miR-4282	CLIP-seq
MIRT2373228	hsa-miR-4423-3p	CLIP-seq
MIRT2373229	hsa-miR-449c	CLIP-seq
MIRT1507647	hsa-miR-4522	CLIP-seq
MIRT2373231	hsa-miR-4722-5p	CLIP-seq
MIRT2152892	hsa-miR-4768-3p	CLIP-seq
MIRT1507666	hsa-miR-548c-3p	CLIP-seq
MIRT1507675	hsa-miR-618	CLIP-seq
MIRT2373233	hsa-miR-940	CLIP-seq

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GO ID	Ontology	Definition	Evidence
GO:0003676	Function	Nucleic acid binding	IEA
GO:0008270	Function	Zinc ion binding	IEA
GO:0046872	Function	Metal ion binding	IEA
GO:0071514	Process	Genomic imprinting	IBA

MIM	HGNC	e!Ensembl
617059	29313	ENSG00000204186

Protein

UniProt ID

Q9HCK1

Protein name

DBF4-type zinc finger-containing protein 2

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF07535	zf-DBF	3 → 36	DBF zinc finger	Domain

Sequence

MQKRQGYCSYCRVQYNNLEQHLFSAQHRSLTRQSRRQICTSSLMERFLQDVLQHHPYHCQ
ESSSTQDETHVNTGSSSEVVHLDDAFSEEEEEDEDKVEDEDATEERPSEVSEPIEELHSR
PHKSQEGTQEVSVRPSVIQKLEKGQQQPLEFVHKIGASVRKCNLVDIGQATNNRSNLVRP
PVICNAPASCLPESSNDRPVTANTTSLPPAAHLDSVSKCDPNKVEKYLEQPDGASRNPVP
SSHVETTSFSYQKHKESNRKSLRMNSDKLVLWKDVKSQGKTLSAGLKFHERMGTKGSLRV
KSPSKLAVNPNKTDMPSNKGIFEDTIAKNHEEFFSNMDCTQEEKHLVFNKTAFWEQKCSV
SSEMKFDCISLQSASDQPQETAQDLSLWKEEQIDQEDNYESRGSEMSFDCSSSFHSLTDQ
SKVSAKEVNLSKEVRTDVQYKNNKSYVSKISSDCDDILHLVTNQSQMIVKEISLQNARHI
SLVDQSYESSSSETNFDCDASPQSTSDYPQQSVTEVNLPKEVHIGLVDKNYGSSSSEVSA
DSVFPLQSVVDRPPVAVTETKLRKKAHTSLVDNYGSSCSETSFDCDVSLESVVDHPQLTV
KGRNLKGRQVHLKHKKRKPSSAKAHLDCDVSLGTVADESQRAVEKINLLKEKNADLMDMN
CESHGPEMGFQADAQLADQSQVAEIERQKVDVDLENKSVQSSRSSLSSDSPASLYHSAHD
EPQEALDEVNLKELNIDMEVRSYDCSSSELTFDSDPPLLSVTEQSHLDAEGKERHIDLED
ESCESDSSEITFDSDIPLYSVIDQPEVAVYEEETVDLESKSNESCVSEITFDSDIPLHSG
NDHPEVAVKEVIQKEEYIHLERKNDEPSGSEISSDSHAPLHSVTNSPEVAVKKLNPQKEE
QVHLENKENEPIDSEVSLDYNIIFHSVTGRSEDPIKEISLHTKEHMYLENKSVFETSLDS
DVPLQAATHKPEVIVKETWLQREKHAEFQGRSTEFSGSKTSLDSGVPHYSVTEPQVAVNK
INRKKQYVLENKNDKCSGSEIILDSNVPPQSMTDQPQLAFLKEKHVNLKDKNSKSGDSKI
TFDSEQLQEAVKKIDQWKEEVIGLKNKINEPSTYKLIHHPDVSVQSVADQPKVAIKHVNL
GNENHMYLEVKNSQYSCSEMNLDSGFLGQSIVNRPQITILEQEHIELEGKHNQCCGSEVS
FDSDDPLQSVADRLRETVKEISLWKDEEVDTEDRRNEAKGFEIMYDSDVLQPVAGQPEEV
VKEVSLWKEHVDLENKIVKPTDSRINFDSHEPLQSVTNKIPGANKEINLLREEHVCLDDK
GYVPSDSEIIYVSNIPLQSVIKQPHILEEEHASLEDKSSNSYSPEESSDSNDSFQAAADE
LQKPVKEINLWKEDHIYLEDKSYKLGDFDVSYASHIPVQFVTDQSSVPVKEINLQKKDHN
DLENKNCEVCGSEIKCHSCVHLQSEVDQPQVSYKEADLQKEEHVVMEEKTDQPSDSEMMY
DSDVPFQIVVNQFPGSVKETHLPKVVLVDLVPGDSDYEVISDDIPLQLVTDPPQLTVKDI
SCINTECIDIEDKSCDFFGSEVRCNCKASTPSMTNQCKETFKIINRKKDYIILGEPSCQS
CGSEMNFNVDASDQSMTYESQGPDEKMVKYIDSEDKSCGYNGSKGKFNLEDTSHRTTHRL
QKAHKEASLRKDPRNAGLKGKSCQSSASAVDFGASSKSALHRRADKKKRSKLKHRDLEVS
CEPDGFEMNFQCAPPLPSDTDQPQETVKKRHPCKKVSSDLKEKNHDSQSSSVLKVDSVRN
LKKAKDVIEDNPDEPVLEALPHVPPSFVGKTWSQIMREDDIKINALVKEFREGRFHCYFD
DDCETKKVSSKGKKKVTWADLQGKEDTAPTQAVSESDDIVCGISDIDDLSVALDKPCHRH
PPAERPPKQKGRVASQCQTAKISHSTQTSCKNYPVMKRKIIRQEEDPPKSKCSRLQDDRK
TKKKVKIGTVEFPASCTKVLKPMQPKALVCVLSSLNIKLKEGEGLPFPKMRHHSWDNDIR
FICKYKRNIFDYYEPLIKQIVISPPLSVIVPEFERRNWVKIHFNRSNQNSSAGDNDADGQ
GSASAPLMAVPARYGFNSHQGTSDSSLFLEESKVLHARELPKKRNFQLTFLNHDVVKISP
KSVRNKLLESQSKKKIHGKRVTTSSNKLGFPKKVYKPIILQQKPRKASEKQSIWIRTKPS
DIIRKYISKYSVFLRHRYQSRSAFLGRYLKKKKSVVSRLKKAKRTAKVLLNSSVPPAGAE
ELSSAMANPPPKRPVRASCRVARRRKKTDESYHGRQKGPSTPVRAYDLRSSSCLQQRERM
MTRLANKLRGNEVK

Sequence length

2354

Interactions

View interactions

Show/Hide Unknown Diseases (2)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Lipoma	nasopalpebral lipoma-coloboma syndrome	N/A	N/A	GenCC
Metabolic Syndrome	Metabolic syndrome	N/A	N/A	GWAS

Show/Hide Text Mining Associations (6)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Beckwith Wiedemann Syndrome	Associate	30898153
Carcinogenesis	Associate	32721119
Nasopalpebral lipoma coloboma syndrome	Associate	27139419
Neoplasms	Associate	32721119
Teratozoospermia	Associate	25762640
Voice Disorders	Associate	30898153

ZDBF2 (zinc finger DBF-type containing 2)