KIAA1549 (KIAA1549)

Gene

• Entrez ID: 57670
• Gene name: KIAA1549
• Gene symbol: KIAA1549
• Synonyms (NCBI Gene): RP86
• Chromosome: 7
• Chromosome location: 7q34
• Summary: The protein encoded by this gene belongs to the UPF0606 family. This gene has been found to be fused to the BRAF oncogene in many cases of pilocytic astrocytoma. The fusion results from 2Mb tandem duplications at 7q34. Alternative splicing results in mult

SNPs

SNP ID	Visualize variation	Clinical significance	Consequence
rs776206391	G>A,T	Pathogenic	Coding sequence variant, synonymous variant, missense variant
rs1554417054	A>-	Likely-pathogenic	Coding sequence variant, frameshift variant
rs1584799745	G>-	Pathogenic	Coding sequence variant, frameshift variant

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT020302	hsa-miR-130b-3p	Sequencing	20371350
MIRT020402	hsa-miR-29c-3p	Sequencing	20371350
MIRT026005	hsa-miR-148a-3p	Sequencing	20371350
MIRT052142	hsa-let-7b-5p	CLASH	23622248
MIRT049354	hsa-miR-92a-3p	CLASH	23622248
MIRT702442	hsa-miR-4438	HITS-CLIP	23313552
MIRT702441	hsa-miR-6504-3p	HITS-CLIP	23313552
MIRT702440	hsa-miR-4698	HITS-CLIP	23313552
MIRT702439	hsa-miR-186-3p	HITS-CLIP	23313552
MIRT702438	hsa-miR-150-5p	HITS-CLIP	23313552
MIRT702437	hsa-miR-619-5p	HITS-CLIP	23313552
MIRT702436	hsa-miR-6506-5p	HITS-CLIP	23313552
MIRT702435	hsa-miR-4731-5p	HITS-CLIP	23313552
MIRT702434	hsa-miR-5589-5p	HITS-CLIP	23313552
MIRT702433	hsa-miR-5095	HITS-CLIP	23313552
MIRT702432	hsa-miR-7151-3p	HITS-CLIP	23313552
MIRT702431	hsa-miR-5089-5p	HITS-CLIP	23313552
MIRT667714	hsa-miR-4700-3p	HITS-CLIP	23824327
MIRT638547	hsa-miR-4524b-3p	HITS-CLIP	23824327
MIRT667713	hsa-miR-6865-3p	HITS-CLIP	23824327
MIRT667712	hsa-miR-3620-3p	HITS-CLIP	23824327
MIRT667711	hsa-miR-6784-3p	HITS-CLIP	23824327
MIRT667710	hsa-miR-6862-3p	HITS-CLIP	23824327
MIRT667709	hsa-miR-1184	HITS-CLIP	23824327
MIRT638546	hsa-miR-4524a-3p	HITS-CLIP	23824327
MIRT667708	hsa-miR-6861-3p	HITS-CLIP	23824327
MIRT667707	hsa-miR-7156-3p	HITS-CLIP	23824327
MIRT638547	hsa-miR-4524b-3p	HITS-CLIP	23824327
MIRT638546	hsa-miR-4524a-3p	HITS-CLIP	23824327
MIRT638545	hsa-miR-520a-5p	HITS-CLIP	23824327
MIRT638544	hsa-miR-525-5p	HITS-CLIP	23824327
MIRT638543	hsa-miR-3180-5p	HITS-CLIP	23824327
MIRT543597	hsa-miR-483-5p	PAR-CLIP	21572407
MIRT543596	hsa-miR-4781-3p	PAR-CLIP	21572407
MIRT543595	hsa-miR-6832-5p	PAR-CLIP	21572407
MIRT543594	hsa-miR-4732-5p	PAR-CLIP	21572407
MIRT543593	hsa-miR-6501-5p	PAR-CLIP	21572407
MIRT543592	hsa-miR-4423-5p	PAR-CLIP	21572407
MIRT543591	hsa-miR-744-3p	PAR-CLIP	21572407
MIRT543590	hsa-miR-3674	PAR-CLIP	21572407
MIRT543589	hsa-miR-1303	PAR-CLIP	21572407
MIRT536480	hsa-miR-1306-5p	PAR-CLIP	22012620
MIRT536479	hsa-miR-141-3p	PAR-CLIP	22012620
MIRT536478	hsa-miR-200a-3p	PAR-CLIP	22012620
MIRT536477	hsa-miR-888-3p	PAR-CLIP	22012620
MIRT319675	hsa-miR-4705	PAR-CLIP	22012620
MIRT536476	hsa-miR-1266-3p	PAR-CLIP	22012620
MIRT522868	hsa-miR-500b-3p	PAR-CLIP	23446348
MIRT522867	hsa-miR-3149	PAR-CLIP	23446348
MIRT522866	hsa-miR-129-5p	PAR-CLIP	23446348
MIRT522865	hsa-miR-4701-5p	PAR-CLIP	23446348
MIRT440380	hsa-miR-218-5p	HITS-CLIP	23212916
MIRT440380	hsa-miR-218-5p	HITS-CLIP	23212916
MIRT638543	hsa-miR-3180-5p	HITS-CLIP	27418678
MIRT638543	hsa-miR-3180-5p	HITS-CLIP	27418678
MIRT638543	hsa-miR-3180-5p	HITS-CLIP	27418678
MIRT638543	hsa-miR-3180-5p	HITS-CLIP	27418678
MIRT638546	hsa-miR-4524a-3p	HITS-CLIP	27418678
MIRT638546	hsa-miR-4524a-3p	HITS-CLIP	27418678
MIRT638546	hsa-miR-4524a-3p	HITS-CLIP	27418678
MIRT638546	hsa-miR-4524a-3p	HITS-CLIP	27418678
MIRT638547	hsa-miR-4524b-3p	HITS-CLIP	27418678
MIRT638547	hsa-miR-4524b-3p	HITS-CLIP	27418678
MIRT638547	hsa-miR-4524b-3p	HITS-CLIP	27418678
MIRT638547	hsa-miR-4524b-3p	HITS-CLIP	27418678
MIRT667714	hsa-miR-4700-3p	HITS-CLIP	27418678
MIRT667714	hsa-miR-4700-3p	HITS-CLIP	27418678
MIRT667714	hsa-miR-4700-3p	HITS-CLIP	27418678
MIRT667714	hsa-miR-4700-3p	HITS-CLIP	27418678
MIRT638545	hsa-miR-520a-5p	HITS-CLIP	27418678
MIRT638545	hsa-miR-520a-5p	HITS-CLIP	27418678
MIRT638545	hsa-miR-520a-5p	HITS-CLIP	27418678
MIRT638545	hsa-miR-520a-5p	HITS-CLIP	27418678
MIRT638544	hsa-miR-525-5p	HITS-CLIP	27418678
MIRT638544	hsa-miR-525-5p	HITS-CLIP	27418678
MIRT638544	hsa-miR-525-5p	HITS-CLIP	27418678
MIRT638544	hsa-miR-525-5p	HITS-CLIP	27418678
MIRT667711	hsa-miR-6784-3p	HITS-CLIP	27418678
MIRT667708	hsa-miR-6861-3p	HITS-CLIP	27418678
MIRT667708	hsa-miR-6861-3p	HITS-CLIP	27418678
MIRT667708	hsa-miR-6861-3p	HITS-CLIP	27418678
MIRT667708	hsa-miR-6861-3p	HITS-CLIP	27418678
MIRT667710	hsa-miR-6862-3p	HITS-CLIP	27418678
MIRT702442	hsa-miR-4438	HITS-CLIP	23313552
MIRT702441	hsa-miR-6504-3p	HITS-CLIP	23313552
MIRT702440	hsa-miR-4698	HITS-CLIP	23313552
MIRT702439	hsa-miR-186-3p	HITS-CLIP	23313552
MIRT702438	hsa-miR-150-5p	HITS-CLIP	23313552
MIRT702437	hsa-miR-619-5p	HITS-CLIP	23313552
MIRT702436	hsa-miR-6506-5p	HITS-CLIP	23313552
MIRT702435	hsa-miR-4731-5p	HITS-CLIP	23313552
MIRT702434	hsa-miR-5589-5p	HITS-CLIP	23313552
MIRT702433	hsa-miR-5095	HITS-CLIP	23313552
MIRT702432	hsa-miR-7151-3p	HITS-CLIP	23313552
MIRT702431	hsa-miR-5089-5p	HITS-CLIP	23313552
MIRT667714	hsa-miR-4700-3p	HITS-CLIP	23824327
MIRT638547	hsa-miR-4524b-3p	HITS-CLIP	23824327
MIRT667713	hsa-miR-6865-3p	HITS-CLIP	23824327
MIRT667712	hsa-miR-3620-3p	HITS-CLIP	23824327
MIRT667711	hsa-miR-6784-3p	HITS-CLIP	23824327
MIRT667710	hsa-miR-6862-3p	HITS-CLIP	23824327
MIRT667709	hsa-miR-1184	HITS-CLIP	23824327
MIRT638546	hsa-miR-4524a-3p	HITS-CLIP	23824327
MIRT667708	hsa-miR-6861-3p	HITS-CLIP	23824327
MIRT667707	hsa-miR-7156-3p	HITS-CLIP	23824327
MIRT638547	hsa-miR-4524b-3p	HITS-CLIP	23824327
MIRT638546	hsa-miR-4524a-3p	HITS-CLIP	23824327
MIRT638545	hsa-miR-520a-5p	HITS-CLIP	23824327
MIRT638544	hsa-miR-525-5p	HITS-CLIP	23824327
MIRT638543	hsa-miR-3180-5p	HITS-CLIP	23824327
MIRT543597	hsa-miR-483-5p	PAR-CLIP	21572407
MIRT543596	hsa-miR-4781-3p	PAR-CLIP	21572407
MIRT543595	hsa-miR-6832-5p	PAR-CLIP	21572407
MIRT543594	hsa-miR-4732-5p	PAR-CLIP	21572407
MIRT543593	hsa-miR-6501-5p	PAR-CLIP	21572407
MIRT543592	hsa-miR-4423-5p	PAR-CLIP	21572407
MIRT543591	hsa-miR-744-3p	PAR-CLIP	21572407
MIRT543590	hsa-miR-3674	PAR-CLIP	21572407
MIRT543589	hsa-miR-1303	PAR-CLIP	21572407
MIRT536480	hsa-miR-1306-5p	PAR-CLIP	22012620
MIRT536479	hsa-miR-141-3p	PAR-CLIP	22012620
MIRT536478	hsa-miR-200a-3p	PAR-CLIP	22012620
MIRT536477	hsa-miR-888-3p	PAR-CLIP	22012620
MIRT319675	hsa-miR-4705	PAR-CLIP	22012620
MIRT536476	hsa-miR-1266-3p	PAR-CLIP	22012620
MIRT522868	hsa-miR-500b-3p	PAR-CLIP	23446348
MIRT522867	hsa-miR-3149	PAR-CLIP	23446348
MIRT522866	hsa-miR-129-5p	PAR-CLIP	23446348
MIRT522865	hsa-miR-4701-5p	PAR-CLIP	23446348
MIRT1091347	hsa-miR-1250	CLIP-seq
MIRT1091348	hsa-miR-1261	CLIP-seq
MIRT1091349	hsa-miR-1290	CLIP-seq
MIRT1091350	hsa-miR-1302	CLIP-seq
MIRT1091351	hsa-miR-141	CLIP-seq
MIRT1091352	hsa-miR-142-5p	CLIP-seq
MIRT1091353	hsa-miR-153	CLIP-seq
MIRT1091354	hsa-miR-15a	CLIP-seq
MIRT1091355	hsa-miR-15b	CLIP-seq
MIRT1091356	hsa-miR-16	CLIP-seq
MIRT1091357	hsa-miR-193a-3p	CLIP-seq
MIRT1091358	hsa-miR-193b	CLIP-seq
MIRT1091359	hsa-miR-195	CLIP-seq
MIRT1091360	hsa-miR-200a	CLIP-seq
MIRT1091361	hsa-miR-214	CLIP-seq
MIRT1091362	hsa-miR-3120-3p	CLIP-seq
MIRT1091363	hsa-miR-3122	CLIP-seq
MIRT1091364	hsa-miR-3189-5p	CLIP-seq
MIRT1091365	hsa-miR-3198	CLIP-seq
MIRT1091366	hsa-miR-3199	CLIP-seq
MIRT1091367	hsa-miR-320a	CLIP-seq
MIRT1091368	hsa-miR-320b	CLIP-seq
MIRT1091369	hsa-miR-320c	CLIP-seq
MIRT1091370	hsa-miR-320d	CLIP-seq
MIRT1091371	hsa-miR-330-3p	CLIP-seq
MIRT1091372	hsa-miR-340	CLIP-seq
MIRT1091373	hsa-miR-3545-3p	CLIP-seq
MIRT1091374	hsa-miR-3619-5p	CLIP-seq
MIRT1091375	hsa-miR-3671	CLIP-seq
MIRT1091376	hsa-miR-3688-3p	CLIP-seq
MIRT1091377	hsa-miR-3689a-3p	CLIP-seq
MIRT1091378	hsa-miR-3689c	CLIP-seq
MIRT1091379	hsa-miR-376a	CLIP-seq
MIRT1091380	hsa-miR-376b	CLIP-seq
MIRT1091381	hsa-miR-3913-5p	CLIP-seq
MIRT1091382	hsa-miR-424	CLIP-seq
MIRT1091383	hsa-miR-4261	CLIP-seq
MIRT1091384	hsa-miR-4286	CLIP-seq
MIRT1091385	hsa-miR-4298	CLIP-seq
MIRT1091386	hsa-miR-4309	CLIP-seq
MIRT1091387	hsa-miR-4330	CLIP-seq
MIRT1091388	hsa-miR-4429	CLIP-seq
MIRT1091389	hsa-miR-448	CLIP-seq
MIRT1091390	hsa-miR-4539	CLIP-seq
MIRT1091391	hsa-miR-4540	CLIP-seq
MIRT1091392	hsa-miR-4715-3p	CLIP-seq
MIRT1091393	hsa-miR-4726-3p	CLIP-seq
MIRT1091394	hsa-miR-4728-5p	CLIP-seq
MIRT1091395	hsa-miR-4758-3p	CLIP-seq
MIRT1091396	hsa-miR-487b	CLIP-seq
MIRT1091397	hsa-miR-496	CLIP-seq
MIRT1091398	hsa-miR-497	CLIP-seq
MIRT1091399	hsa-miR-567	CLIP-seq
MIRT1091400	hsa-miR-570	CLIP-seq
MIRT1091401	hsa-miR-646	CLIP-seq
MIRT1091402	hsa-miR-657	CLIP-seq
MIRT1091403	hsa-miR-761	CLIP-seq
MIRT1091404	hsa-miR-767-3p	CLIP-seq
MIRT1091405	hsa-miR-892b	CLIP-seq
MIRT1091406	hsa-miR-942	CLIP-seq
MIRT1091407	hsa-miR-101	CLIP-seq
MIRT1091408	hsa-miR-103b	CLIP-seq
MIRT1091409	hsa-miR-1179	CLIP-seq
MIRT1091410	hsa-miR-1206	CLIP-seq
MIRT1091347	hsa-miR-1250	CLIP-seq
MIRT1091411	hsa-miR-1258	CLIP-seq
MIRT1091412	hsa-miR-1286	CLIP-seq
MIRT1091350	hsa-miR-1302	CLIP-seq
MIRT1091351	hsa-miR-141	CLIP-seq
MIRT1091413	hsa-miR-144	CLIP-seq
MIRT1091414	hsa-miR-188-5p	CLIP-seq
MIRT1091415	hsa-miR-193a-5p	CLIP-seq
MIRT1091416	hsa-miR-1976	CLIP-seq
MIRT1091360	hsa-miR-200a	CLIP-seq
MIRT1091417	hsa-miR-204	CLIP-seq
MIRT1091418	hsa-miR-211	CLIP-seq
MIRT1091419	hsa-miR-216a	CLIP-seq
MIRT1091420	hsa-miR-24	CLIP-seq
MIRT1091421	hsa-miR-3117-3p	CLIP-seq
MIRT1091362	hsa-miR-3120-3p	CLIP-seq
MIRT1091422	hsa-miR-3127-5p	CLIP-seq
MIRT1091423	hsa-miR-3145-5p	CLIP-seq
MIRT1091424	hsa-miR-3190	CLIP-seq
MIRT1091425	hsa-miR-3194-3p	CLIP-seq
MIRT1091365	hsa-miR-3198	CLIP-seq
MIRT1091373	hsa-miR-3545-3p	CLIP-seq
MIRT1091426	hsa-miR-370	CLIP-seq
MIRT1091379	hsa-miR-376a	CLIP-seq
MIRT1091380	hsa-miR-376b	CLIP-seq
MIRT1091427	hsa-miR-376c	CLIP-seq
MIRT1091428	hsa-miR-3928	CLIP-seq
MIRT1091429	hsa-miR-3943	CLIP-seq
MIRT1091430	hsa-miR-4272	CLIP-seq
MIRT1091431	hsa-miR-4284	CLIP-seq
MIRT1091432	hsa-miR-4289	CLIP-seq
MIRT1091385	hsa-miR-4298	CLIP-seq
MIRT1091386	hsa-miR-4309	CLIP-seq
MIRT1091433	hsa-miR-4323	CLIP-seq
MIRT1091434	hsa-miR-4418	CLIP-seq
MIRT1091435	hsa-miR-4436b-3p	CLIP-seq
MIRT1091436	hsa-miR-4459	CLIP-seq
MIRT1091390	hsa-miR-4539	CLIP-seq
MIRT1091391	hsa-miR-4540	CLIP-seq
MIRT1091437	hsa-miR-4660	CLIP-seq
MIRT1091438	hsa-miR-4668-3p	CLIP-seq
MIRT1091439	hsa-miR-4685-5p	CLIP-seq
MIRT1091440	hsa-miR-4691-5p	CLIP-seq
MIRT1091441	hsa-miR-4718	CLIP-seq
MIRT1091442	hsa-miR-4722-5p	CLIP-seq
MIRT1091393	hsa-miR-4726-3p	CLIP-seq
MIRT1091443	hsa-miR-4729	CLIP-seq
MIRT1091444	hsa-miR-4760-3p	CLIP-seq
MIRT1091445	hsa-miR-4761-5p	CLIP-seq
MIRT1091446	hsa-miR-4772-3p	CLIP-seq
MIRT1091447	hsa-miR-4787-3p	CLIP-seq
MIRT1091448	hsa-miR-4795-5p	CLIP-seq
MIRT1091449	hsa-miR-489	CLIP-seq
MIRT1091450	hsa-miR-508-5p	CLIP-seq
MIRT1091451	hsa-miR-509-3-5p	CLIP-seq
MIRT1091452	hsa-miR-509-5p	CLIP-seq
MIRT1091453	hsa-miR-514	CLIP-seq
MIRT1091454	hsa-miR-514b-3p	CLIP-seq
MIRT1091455	hsa-miR-548a-3p	CLIP-seq
MIRT1091456	hsa-miR-548e	CLIP-seq
MIRT1091457	hsa-miR-548f	CLIP-seq
MIRT1091458	hsa-miR-552	CLIP-seq
MIRT1091459	hsa-miR-582-5p	CLIP-seq
MIRT1091460	hsa-miR-584	CLIP-seq
MIRT1091461	hsa-miR-587	CLIP-seq
MIRT1091462	hsa-miR-605	CLIP-seq
MIRT1091463	hsa-miR-617	CLIP-seq
MIRT1091464	hsa-miR-7	CLIP-seq
MIRT1091465	hsa-miR-802	CLIP-seq
MIRT1091466	hsa-miR-935	CLIP-seq
MIRT2024362	hsa-miR-10a	CLIP-seq
MIRT2024363	hsa-miR-10b	CLIP-seq
MIRT2024364	hsa-miR-1236	CLIP-seq
MIRT1091347	hsa-miR-1250	CLIP-seq
MIRT2024365	hsa-miR-1253	CLIP-seq
MIRT1091348	hsa-miR-1261	CLIP-seq
MIRT1091350	hsa-miR-1302	CLIP-seq
MIRT1091351	hsa-miR-141	CLIP-seq
MIRT2024366	hsa-miR-149	CLIP-seq
MIRT2024367	hsa-miR-150	CLIP-seq
MIRT1091360	hsa-miR-200a	CLIP-seq
MIRT1091419	hsa-miR-216a	CLIP-seq
MIRT2024368	hsa-miR-3119	CLIP-seq
MIRT2024369	hsa-miR-3141	CLIP-seq
MIRT2024370	hsa-miR-3152-5p	CLIP-seq
MIRT2024371	hsa-miR-3163	CLIP-seq
MIRT1091425	hsa-miR-3194-3p	CLIP-seq
MIRT1091365	hsa-miR-3198	CLIP-seq
MIRT2024372	hsa-miR-3201	CLIP-seq
MIRT1091373	hsa-miR-3545-3p	CLIP-seq
MIRT1091427	hsa-miR-376c	CLIP-seq
MIRT2024373	hsa-miR-377	CLIP-seq
MIRT2024374	hsa-miR-4276	CLIP-seq
MIRT1091385	hsa-miR-4298	CLIP-seq
MIRT1091386	hsa-miR-4309	CLIP-seq
MIRT1091390	hsa-miR-4539	CLIP-seq
MIRT1091441	hsa-miR-4718	CLIP-seq
MIRT2024375	hsa-miR-4720-3p	CLIP-seq
MIRT1091393	hsa-miR-4726-3p	CLIP-seq
MIRT2024376	hsa-miR-4742-3p	CLIP-seq
MIRT1091445	hsa-miR-4761-5p	CLIP-seq
MIRT1091446	hsa-miR-4772-3p	CLIP-seq
MIRT2024377	hsa-miR-4791	CLIP-seq
MIRT2024378	hsa-miR-4804-3p	CLIP-seq
MIRT2024379	hsa-miR-494	CLIP-seq
MIRT2024380	hsa-miR-513a-3p	CLIP-seq
MIRT2024381	hsa-miR-513a-5p	CLIP-seq
MIRT2024382	hsa-miR-520f	CLIP-seq
MIRT2024383	hsa-miR-548n	CLIP-seq
MIRT2024384	hsa-miR-548t	CLIP-seq
MIRT2024385	hsa-miR-599	CLIP-seq
MIRT2024386	hsa-miR-640	CLIP-seq
MIRT2024387	hsa-miR-664	CLIP-seq
MIRT1091404	hsa-miR-767-3p	CLIP-seq
MIRT1091407	hsa-miR-101	CLIP-seq
MIRT1091408	hsa-miR-103b	CLIP-seq
MIRT1091409	hsa-miR-1179	CLIP-seq
MIRT2255378	hsa-miR-1226	CLIP-seq
MIRT2024364	hsa-miR-1236	CLIP-seq
MIRT2255379	hsa-miR-1265	CLIP-seq
MIRT2255380	hsa-miR-1283	CLIP-seq
MIRT2255381	hsa-miR-1284	CLIP-seq
MIRT1091412	hsa-miR-1286	CLIP-seq
MIRT2255382	hsa-miR-1289	CLIP-seq
MIRT2255383	hsa-miR-1324	CLIP-seq
MIRT2255384	hsa-miR-133a	CLIP-seq
MIRT2255385	hsa-miR-133b	CLIP-seq
MIRT2255386	hsa-miR-148a	CLIP-seq
MIRT2255387	hsa-miR-148b	CLIP-seq
MIRT2255388	hsa-miR-152	CLIP-seq
MIRT2255389	hsa-miR-188-3p	CLIP-seq
MIRT1091357	hsa-miR-193a-3p	CLIP-seq
MIRT1091358	hsa-miR-193b	CLIP-seq
MIRT2255390	hsa-miR-2052	CLIP-seq
MIRT2255391	hsa-miR-21	CLIP-seq
MIRT2255392	hsa-miR-2113	CLIP-seq
MIRT1091419	hsa-miR-216a	CLIP-seq
MIRT2255393	hsa-miR-216b	CLIP-seq
MIRT2255394	hsa-miR-2467-3p	CLIP-seq
MIRT2255395	hsa-miR-29a	CLIP-seq
MIRT2255396	hsa-miR-29b	CLIP-seq
MIRT2255397	hsa-miR-29c	CLIP-seq
MIRT2255398	hsa-miR-302a	CLIP-seq
MIRT2255399	hsa-miR-302b	CLIP-seq
MIRT2255400	hsa-miR-302c	CLIP-seq
MIRT2255401	hsa-miR-302d	CLIP-seq
MIRT2255402	hsa-miR-302e	CLIP-seq
MIRT1091362	hsa-miR-3120-3p	CLIP-seq
MIRT2255403	hsa-miR-3137	CLIP-seq
MIRT2255404	hsa-miR-3155	CLIP-seq
MIRT2255405	hsa-miR-3155b	CLIP-seq
MIRT2024371	hsa-miR-3163	CLIP-seq
MIRT2255406	hsa-miR-3173-3p	CLIP-seq
MIRT2255407	hsa-miR-3179	CLIP-seq
MIRT2255408	hsa-miR-3185	CLIP-seq
MIRT1091365	hsa-miR-3198	CLIP-seq
MIRT1091373	hsa-miR-3545-3p	CLIP-seq
MIRT2255409	hsa-miR-3611	CLIP-seq
MIRT2255410	hsa-miR-3616-5p	CLIP-seq
MIRT2255411	hsa-miR-3647-5p	CLIP-seq
MIRT2255412	hsa-miR-3650	CLIP-seq
MIRT2255413	hsa-miR-3675-3p	CLIP-seq
MIRT2255414	hsa-miR-3691-3p	CLIP-seq
MIRT2255415	hsa-miR-3691-5p	CLIP-seq
MIRT2255416	hsa-miR-372	CLIP-seq
MIRT2255417	hsa-miR-373	CLIP-seq
MIRT1091379	hsa-miR-376a	CLIP-seq
MIRT1091380	hsa-miR-376b	CLIP-seq
MIRT2255418	hsa-miR-3908	CLIP-seq
MIRT1091428	hsa-miR-3928	CLIP-seq
MIRT2255419	hsa-miR-3934	CLIP-seq
MIRT2255420	hsa-miR-3942-3p	CLIP-seq
MIRT2255421	hsa-miR-3942-5p	CLIP-seq
MIRT2255422	hsa-miR-3944-5p	CLIP-seq
MIRT2255423	hsa-miR-421	CLIP-seq
MIRT2024374	hsa-miR-4276	CLIP-seq
MIRT2255424	hsa-miR-4307	CLIP-seq
MIRT1091386	hsa-miR-4309	CLIP-seq
MIRT2255425	hsa-miR-431	CLIP-seq
MIRT2255426	hsa-miR-4311	CLIP-seq
MIRT2255427	hsa-miR-432	CLIP-seq
MIRT2255428	hsa-miR-4436b-5p	CLIP-seq
MIRT1091436	hsa-miR-4459	CLIP-seq
MIRT2255429	hsa-miR-4464	CLIP-seq
MIRT2255430	hsa-miR-4492	CLIP-seq
MIRT2255431	hsa-miR-4498	CLIP-seq
MIRT2255432	hsa-miR-4530	CLIP-seq
MIRT2255433	hsa-miR-4633-3p	CLIP-seq
MIRT2255434	hsa-miR-4642	CLIP-seq
MIRT2255435	hsa-miR-4684-5p	CLIP-seq
MIRT2255436	hsa-miR-4690-3p	CLIP-seq
MIRT2255437	hsa-miR-4703-5p	CLIP-seq
MIRT2255438	hsa-miR-4714-3p	CLIP-seq
MIRT1091392	hsa-miR-4715-3p	CLIP-seq
MIRT2255439	hsa-miR-4716-5p	CLIP-seq
MIRT1091442	hsa-miR-4722-5p	CLIP-seq
MIRT2255440	hsa-miR-4724-5p	CLIP-seq
MIRT1091393	hsa-miR-4726-3p	CLIP-seq
MIRT2255441	hsa-miR-4728-3p	CLIP-seq
MIRT1091443	hsa-miR-4729	CLIP-seq
MIRT2255442	hsa-miR-4748	CLIP-seq
MIRT1091444	hsa-miR-4760-3p	CLIP-seq
MIRT2255443	hsa-miR-4766-3p	CLIP-seq
MIRT1091448	hsa-miR-4795-5p	CLIP-seq
MIRT2255444	hsa-miR-4796-5p	CLIP-seq
MIRT2255445	hsa-miR-484	CLIP-seq
MIRT2255446	hsa-miR-493	CLIP-seq
MIRT2255447	hsa-miR-499-3p	CLIP-seq
MIRT2255448	hsa-miR-499a-3p	CLIP-seq
MIRT2255449	hsa-miR-512-3p	CLIP-seq
MIRT2255450	hsa-miR-520a-3p	CLIP-seq
MIRT2255451	hsa-miR-520b	CLIP-seq
MIRT2255452	hsa-miR-520c-3p	CLIP-seq
MIRT2255453	hsa-miR-520d-3p	CLIP-seq
MIRT2255454	hsa-miR-520e	CLIP-seq
MIRT2255455	hsa-miR-545	CLIP-seq
MIRT2024383	hsa-miR-548n	CLIP-seq
MIRT2255456	hsa-miR-550b	CLIP-seq
MIRT2255457	hsa-miR-568	CLIP-seq
MIRT1091400	hsa-miR-570	CLIP-seq
MIRT2255458	hsa-miR-573	CLIP-seq
MIRT2255459	hsa-miR-578	CLIP-seq
MIRT2255460	hsa-miR-579	CLIP-seq
MIRT1091459	hsa-miR-582-5p	CLIP-seq
MIRT2255461	hsa-miR-590-5p	CLIP-seq
MIRT2024385	hsa-miR-599	CLIP-seq
MIRT2255462	hsa-miR-626	CLIP-seq
MIRT2255463	hsa-miR-634	CLIP-seq
MIRT2255464	hsa-miR-659	CLIP-seq
MIRT2024387	hsa-miR-664	CLIP-seq
MIRT2255465	hsa-miR-758	CLIP-seq
MIRT2255466	hsa-miR-762	CLIP-seq
MIRT2255467	hsa-miR-891b	CLIP-seq
MIRT1091405	hsa-miR-892b	CLIP-seq
MIRT2255468	hsa-miR-922	CLIP-seq
MIRT2389796	hsa-miR-3140-3p	CLIP-seq
MIRT2389797	hsa-miR-3182	CLIP-seq
MIRT2430422	hsa-miR-3174	CLIP-seq
MIRT2430423	hsa-miR-3921	CLIP-seq
MIRT2430424	hsa-miR-3973	CLIP-seq
MIRT2024374	hsa-miR-4276	CLIP-seq
MIRT2430425	hsa-miR-4474-5p	CLIP-seq
MIRT2430426	hsa-miR-4504	CLIP-seq
MIRT2430427	hsa-miR-4653-5p	CLIP-seq
MIRT2430428	hsa-miR-4765	CLIP-seq
MIRT2430429	hsa-miR-4766-5p	CLIP-seq
MIRT2430430	hsa-miR-593	CLIP-seq
MIRT1091434	hsa-miR-4418	CLIP-seq
MIRT1091451	hsa-miR-509-3-5p	CLIP-seq
MIRT1091452	hsa-miR-509-5p	CLIP-seq
MIRT1091434	hsa-miR-4418	CLIP-seq
MIRT1091451	hsa-miR-509-3-5p	CLIP-seq
MIRT1091452	hsa-miR-509-5p	CLIP-seq
MIRT2557389	hsa-miR-203	CLIP-seq
MIRT2255390	hsa-miR-2052	CLIP-seq
MIRT2557390	hsa-miR-2278	CLIP-seq
MIRT2557391	hsa-miR-3188	CLIP-seq
MIRT1091371	hsa-miR-330-3p	CLIP-seq
MIRT2557392	hsa-miR-3907	CLIP-seq
MIRT2557393	hsa-miR-3909	CLIP-seq
MIRT2557394	hsa-miR-4299	CLIP-seq
MIRT2557395	hsa-miR-4456	CLIP-seq
MIRT1091392	hsa-miR-4715-3p	CLIP-seq
MIRT2557396	hsa-miR-4735-5p	CLIP-seq
MIRT2557397	hsa-miR-4775	CLIP-seq
MIRT2024379	hsa-miR-494	CLIP-seq
MIRT2024380	hsa-miR-513a-3p	CLIP-seq
MIRT2557398	hsa-miR-548q	CLIP-seq
MIRT2255460	hsa-miR-579	CLIP-seq
MIRT2557399	hsa-miR-590-3p	CLIP-seq
MIRT2557400	hsa-miR-877	CLIP-seq
MIRT2557391	hsa-miR-3188	CLIP-seq
MIRT1091392	hsa-miR-4715-3p	CLIP-seq
MIRT2557396	hsa-miR-4735-5p	CLIP-seq
MIRT2557397	hsa-miR-4775	CLIP-seq
MIRT2557399	hsa-miR-590-3p	CLIP-seq
MIRT2557400	hsa-miR-877	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	37207277
GO:0005886	Component	Plasma membrane	TAS
GO:0005929	Component	Cilium	IEA
GO:0016020	Component	Membrane	IEA
GO:0032391	Component	Photoreceptor connecting cilium	IEA
GO:0032391	Component	Photoreceptor connecting cilium	ISS
GO:0042995	Component	Cell projection	IEA

Other IDs

• MIM: 613344
• HGNC: 22219
• e!Ensembl: ENSG00000122778

Protein

• UniProt ID: Q9HCM3
• Protein name: UPF0606 protein KIAA1549
• Protein function: May play a role in photoreceptor function.
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF12877	DUF3827	1036 → 1702	Domain of unknown function (DUF3827)	Family

• Tissue specificity: TISSUE SPECIFICITY: [Isoform 1]: Expression is low to moderate in retina and tissues, such as heart and kidney, and is predominantly expressed in brain. {ECO:0000269|PubMed:30120214}.; TISSUE SPECIFICITY: [Isoform 4]: Abundantly expressed in the retina, c
• Sequence:

  MPGARRRRRGAAMEGKPRAGVALAPGPSGRRPSARCARRRRPGLLLPGLWLLLLARPASC
  APDELSPEQHNLSLYSMELVLKKSTGHSAAQVALTETAPGSQHSSPLHVTAPPSATTFDT
  AFFNQGKQTKSTADPSIFVATYVSVTSKEVAVNDDEMDNFLPDTHWTTPRMVSPIQYITV
  SPPGLPREALEPMLTPSLPMVSLQDEEVTSGWQNTTRQPAAYAESASHFHTFRSAFRTSE
  GIVPTPGRNLVLYPTDAYSHLSSRTLPEIVASLTEGVETTLFLSSRSLMPQPLGDGITIP
  LPSLGEVSQPPEEVWATSADRYTDVTTVLSQSLEETISPRTYPTVTASHAALAFSRTHSP
  LLSTPLAFASSASPTDVSSNPFLPSDSSKTSELHSNSALPGPVDNTHILSPVSSFRPYTW
  CAACTVPSPQQVLATSLMEKDVGSGDGAETLCMTVLEESSISLMSSVVADFSEFEEDPQV
  FNTLFPSRPIVPLSSRSMEISETSVGISAEVDMSSVTTTQVPPAHGRLSVPASLDPTAGS
  LSVAETQVTPSSVTTAFFSVITSILLDSSFSVIANKNTPSLAVRDPSVFTPYSLVPSVES
  SLFSDQERSSFSEHKPRGALDFASSFFSTPPLELSGSISSPSEAPASLSLMPSDLSPFTS
  QSFSPLVETFTLFDSSDLQSSQLSLPSSTNLEFSQLQPSSELPLNTIMLLPSRSEVSPWS
  SFPSDSLEFVEASTVSLTDSEAHFTSAFIETTSYLESSLISHESAVTALVPPGSESFDIL
  TAGIQATSPLTTVHTTPILTESSLFSTLTPPDDQISALDGHVSVLASFSKAIPTGTVLIT
  DAYLPSGSSFVSEATPFPLPTELTVVGPSLTPTEVPLNTSTEVSTTSTGAATGGPLDSTL
  MGDAASQSPPESSAAPPLPSLRPVTAFTLEATVDTPTLATAKPPYVCDITVPDAYLITTV
  LARRAVQEYIITAIKEVLRIHFNRAVELKVYELFTDFTFLVTSGPFVYTAISVINVLINS
  KLVRDQTPLILSVKPSFLVPESRFQVQTVLQFVPPSVDTGFCNFTQRIEKGLMTALFEVR
  KHHQGTYNLTVQILNITISSSRVTPRRGPVNIIFAVKSTQGFLNGSEVSELLRNLSVVEF
  SFYLGYPVLQIAEPFQYPQLNLSQLLKSSWVRTVLLGVMEKQLQNEVFQAEMERKLAQLL
  SEVSTRRRMWRRATVAAGNSVVQVVNVSRLEGDDNPVQLIYFVEDQDGERLSAVKSSDLI
  NKMDLQRAAIILGYRIQGVIAQPVDRVKRPSPESQSNNLWVIVGVVIPVLVVMVIVVILY
  WKLCRTDKLDFQPDTVANIQQRQKLQIPSVKGFDFAKQHLGQHNKDDILIIHEPAPLPGP
  LKDHTTPSENGDVPSPKSKIPSKNVRHRGRVSPSDADSTVSEESSERDAGDKTPGAVNDG
  RSHRAPQSGPPLPSSGNEQHSSASIFEHVDRISRPPEASRRVPSKIQLIAMQPIPAPPVQ
  RPSPADRVAESNKINKEIQTALRHKSEIEHHRNKIRLRAKRRGHYEFPVVDDLSSGDTKE
  RHRVYRRAQMQIDKILDPTASVPSVFIEPRKSSRIKRSPKPRRKHQVNGCPADAEKDRLI
  TTDSDGTYRRPPGVHNSAYIGCPSDPDLPADVQTPSSVELGRYPALPFPASQYIPPQPSI
  EEARQTMHSLLDDAFALVAPSSQPASTAGVGPGVPPGLPANSTPSQEERRATQWGSFYSP
  AQTANNPCSRYEDYGMTPPTGPLPRPGFGPGLLQSTELVPPDPQQPQASAEAPFAARGIY
  SEEMPSVARPRPVGGTTGSQIQHLTQVGIASRIGAQPVEIPPSRGSQYGGPGWPSYGEDE
  AGRREATHMLGHQEYSSSPLFQVPRTSGREPSAPSGNLPHRGLQGPGLGYPTSSTEDLQP
  GHSSASLIKAIREELLRLSQKQSTVQNFHS

• Sequence length: 1950

Pathways

Reactome:

Signaling by BRAF and RAF fusions

Associated diseases

Causal
Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Retinal dystrophy	Likely pathogenic	rs2485558000	RCV003891175
Retinitis pigmentosa	Likely pathogenic; Pathogenic	rs1554417054	RCV001199697
Retinitis pigmentosa 86	Likely pathogenic; Pathogenic	rs759848796, rs2485557946, rs2485556440, rs1584799745, rs776206391	RCV002289427 RCV003389580 RCV003989935 RCV000852363 RCV000852364

Unknown
Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Clear cell carcinoma of kidney	Benign	rs116788555	RCV005907400
KIAA1549-related disorder	Likely benign; Benign; Uncertain significance; Conflicting classifications of pathogenicity	rs138549974, rs61734245, rs375104518, rs753283721, rs551844143, rs138395431, rs377359028, rs568706447, rs146280134, rs80222245, rs752657504, rs565452410, rs200244255, rs201109912, rs572555872, rs191728209, rs373889793, rs1336694554, rs372640527, rs551976861, rs374262068, rs748841862, rs202110418, rs765305065, rs372791474, rs773490608, rs769026956, rs1814531852, rs968580758, rs139412672, rs115152294, rs201514543, rs138709216, rs199604464, rs183617317, rs185026022, rs117908080, rs142709120, rs149565300, rs149876667	RCV003963271 RCV003963269 RCV003973274 RCV003946199 RCV003938860 RCV003938877 RCV003965994 RCV003980420 RCV003931025 RCV004746403 RCV003940870 RCV003908859 RCV003908851 RCV003940962 RCV003908868 RCV003940915 RCV003911060 RCV003923358 RCV003951014 RCV003978801 RCV003951231 RCV003963700 RCV003961233 RCV003410583 RCV003420717 RCV003911905 RCV003927241 RCV003937116 RCV003927005 RCV003943111 RCV003975644 RCV004746125 RCV003930604 RCV004746138 RCV003912838 RCV003975722 RCV003977945 RCV003933006 RCV003950734 RCV003902959
Nonpapillary renal cell carcinoma	Likely benign	rs374513712	RCV005912687
Optic atrophy	Likely benign; Uncertain significance	rs202110418, rs371772877	RCV004817140 RCV004813646
Ovarian serous cystadenocarcinoma	Uncertain significance	rs775250591	RCV005928309
Uterine corpus endometrial carcinoma	Likely benign	rs767343156	RCV005910948

Associations from Text Mining
Disease Name	Relationship Type	References
Astrocytoma	Associate	19603027, 20068183, 21046410, 21884820, 22157620, 22568401, 22591444, 25040262, 25524464, 26083571, 26222501, 27469209, 28002790, 28448514, 29141672, 29768357, 29802359, 31329636, 32771057, 33346834, 35210278, 35363819, 36503484
Brain Neoplasms	Associate	29976640
Carcinoma	Associate	24422672
Central Nervous System Neoplasms	Associate	26115961
Epidermolysis bullosa with pyloric atresia	Associate	26083571
Ganglioglioma	Associate	25524464
Glioma	Associate	21884820, 22157620, 22568401, 22591444, 25040262, 26115961, 28912153
Infratentorial Neoplasms	Associate	23702730
Lymphoma Non Hodgkin	Associate	24767714, 25040262, 33346834, 34626238
Meningeal Neoplasms	Associate	29802359, 32605662, 34493325
Neoplasms	Associate	22157620, 22591444, 26115961, 26371886, 28912153, 31329636
Neoplasms Neuroepithelial	Associate	38604736
Oligodendroglioma	Associate	22568401
Retinal Dystrophies	Associate	23105016