Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
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57216
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Gene name
Gene Name - the full gene name approved by the HGNC.
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VANGL planar cell polarity protein 2 |
Gene symbol
Gene Symbol - the official gene symbol approved by the HGNC.
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VANGL2 |
Synonyms (NCBI Gene)
Gene synonyms aliases
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LPP1, LTAP, STB1, STBM, STBM1 |
Chromosome
Chromosome number
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1 |
Chromosome location
Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
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1q23.2 |
Summary
Summary of gene provided in NCBI Entrez Gene.
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The protein encoded by this gene is a membrane protein involved in the regulation of planar cell polarity, especially in the stereociliary bundles of the cochlea. The encoded protein transmits directional signals to individual cells or groups of cells in |
Causal |
Disease term |
Disease name |
dbSNP ID |
References |
Anencephaly |
Anencephaly, Iniencephaly, Exencephaly |
rs773607884 |
20558380, 2373757 |
Hydrocephalus |
Hydrocephalus |
rs387907320, rs369384363, rs387907321, rs372127610, rs770273135, rs797045095, rs797045707, rs769795916, rs781251438, rs922703465, rs376078512, rs1567043467, rs1587149916, rs1586841546 |
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Neural tube defect |
Neural Tube Defects |
rs121434297, rs137853061, rs137853062, rs768434408, rs777661576, rs747846362, rs200137991, rs780014899, rs574132670, rs786204013, rs147257424, rs763539350, rs776483190, rs781461462, rs1114167354, rs147277149, rs765586205, rs377443637, rs986604359, rs1293600145, rs114727354, rs768980918, rs140277700, rs139645527, rs750323424, rs368321176, rs1579619636, rs893229476, rs754990692, rs763079713, rs1593037878, rs747100389, rs372056091, rs1593083585, rs778121031, rs748778907, rs776969786, rs1189298981, rs375908206, rs1734858651, rs778738842 View all (26 more) |
2373757 |
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Unknown |
Disease term |
Disease name |
Evidence |
References |
Source |
Neural Tube Defect |
neural tube defects, susceptibility to |
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|
GenCC |
Multiple Sclerosis |
Multiple Sclerosis |
|
|
GWAS |
Rheumatoid arthritis |
Rheumatoid arthritis |
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GWAS |
Systemic lupus erythematosus |
Systemic lupus erythematosus |
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|
GWAS |
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Associations from Text Mining |
Disease Name |
Relationship Type |
References |
Bohring syndrome |
Associate
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37053013, 39614348 |
Capillary Malformation Arteriovenous Malformation |
Associate
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20738329 |
Colorectal Neoplasms |
Associate
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23579212 |
Glioma |
Stimulate
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28481871 |
Lung Neoplasms |
Associate
|
32107851 |
Nasal Polyps |
Associate
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38232516 |
Neoplasms |
Associate
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23579212 |
Neural Tube Defects |
Associate
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20738329, 33684218 |
Osteoarthritis |
Inhibit
|
29806631 |
Pneumonia Pneumocystis |
Associate
|
29573971 |
Polycystic Kidney Autosomal Recessive |
Associate
|
30414501 |
Spinal Dysraphism |
Associate
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20738329 |
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